Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C6orf54 Gene 0 1.68 0.84 9.05 2.92 2.03 0.45 10.04 8.30 19.67 38.10 0.03 0.35 0.64 0.25 0.69 0.44 1.58 3.43 2.89 2.46 0.40 0.07 0.19 2 414364 Transcript 0 0.98 0.83 0.85 0.59 0.47 0.11 2.92 0.75 2.35 5.16 0.11 0.83 2.24 0.50 2.43 0.17 0.77 0.69 0.74 0.74 0.38 0.24 0.68 3 456585 Transcript 0 0.09 0.00 1.50 0.98 0.00 0.00 0.78 1.71 4.98 9.17 0.00 0.00 0.00 0.00 0.00 0.43 0.14 1.36 0.09 0.42 0.52 0.00 0.00 4 416966 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 0.00 0.00 1.08 0.00 0.00 0.00 0.00 0.21 2.32 15.44 0.00 0.00 0.00 0.00 0.00 1.76 0.98 0.26 0.30 0.00 0.65 0.00 0.00 6 E1_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.14 10.50 22.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.28 4.42 0.00 0.00 0.00 0.00 7 E1a_E1b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1b ExonRegion 0 0.35 0.00 2.59 0.46 0.00 0.00 1.94 1.96 4.31 13.73 0.00 0.00 0.00 0.00 0.00 0.50 0.55 1.73 0.37 0.89 0.00 0.00 0.00 9 E1_Ab KnownBoundary 0 3.63 0.00 9.17 1.86 0.00 0.00 1.99 8.54 20.83 32.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.23 0.00 3.26 0.00 0.00 0.00 10 ER1c ExonRegion 0 1.30 0.21 8.52 1.94 1.66 0.00 3.04 7.58 29.55 43.32 0.00 0.00 0.00 0.00 0.00 0.00 1.89 2.79 1.98 2.93 0.00 0.00 0.00 11 E1_Ac KnownBoundary 0 6.67 2.96 5.29 2.03 0.00 0.00 0.00 6.65 34.81 51.28 0.00 0.00 0.00 0.00 0.00 0.00 8.42 0.00 4.52 6.26 0.00 0.00 0.00 12 ER1d ExonRegion 0 2.18 0.35 8.36 2.87 0.00 0.00 4.18 11.24 38.69 54.16 0.00 0.00 0.00 0.00 0.00 1.37 4.36 3.81 4.23 2.13 0.23 0.00 0.00 13 E1_Db KnownBoundary 0 0.00 0.00 4.41 0.00 0.00 0.00 2.25 11.67 28.27 37.66 0.00 0.00 0.00 0.00 0.00 3.76 0.00 2.36 0.00 2.75 3.15 0.00 0.00 14 E1b_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.05 10.13 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.86 0.00 0.00 0.00 0.00 15 ER1e ExonRegion 0 0.00 0.00 2.18 1.45 0.00 0.00 1.20 4.00 12.16 19.17 0.00 0.00 0.00 0.00 0.00 1.21 0.00 1.85 0.00 0.80 2.07 0.00 0.00 16 E1_Dc NovelBoundary 0 0.00 0.00 3.67 0.00 0.00 0.00 10.86 6.16 20.95 35.86 0.00 0.00 0.00 0.00 0.00 0.00 4.11 2.20 0.00 0.00 0.00 0.00 0.00 17 E1c_E2a KnownJunction 0 0.00 0.00 0.00 2.00 0.00 0.00 0.00 0.00 2.84 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.87 0.00 0.00 0.00 0.00 0.00 18 E2_Aa NovelBoundary 0 0.00 0.00 9.22 0.00 3.48 0.00 2.12 10.15 25.32 52.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.23 0.00 0.00 0.00 0.00 0.00 19 ER2a ExonRegion 0 1.83 0.18 6.23 1.38 1.15 0.00 6.08 13.23 37.13 47.86 0.00 0.00 0.00 0.12 0.00 0.75 1.14 7.11 2.69 2.19 0.76 0.00 0.00 20 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E2a_E4a KnownJunction 0 0.00 0.00 1.57 1.53 0.00 0.00 14.22 4.81 6.39 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.62 0.00 0.00 0.00 0.00 0.00 22 E3_Aa NovelBoundary 0 67.05 73.54 41.78 51.31 62.14 44.29 54.98 52.04 31.05 39.19 30.59 18.01 0.00 33.79 15.20 51.78 30.57 124.90 79.72 57.21 45.34 46.97 65.99 23 ER3a ExonRegion 0 2.95 2.48 2.56 1.77 1.40 0.32 8.77 2.24 7.05 12.79 0.34 2.50 6.72 1.50 7.28 0.52 2.30 2.08 2.22 2.22 1.15 0.73 2.04 24 E3_Da NovelBoundary 0 0.00 0.00 0.00 2.06 0.00 0.00 20.80 9.82 11.11 10.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.52 0.00 0.00 0.00 25 E4_Aa NovelBoundary 0 0.00 0.00 4.46 3.06 4.33 0.00 10.51 4.56 14.76 23.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 3.26 0.00 0.00 0.00 26 ER4a ExonRegion 0 1.87 1.25 14.61 4.97 3.70 0.99 17.22 9.71 16.63 45.40 0.00 0.25 0.00 0.21 0.00 0.00 1.52 2.96 4.04 3.35 0.17 0.00 0.00 27 ER4b ExonRegion 0 0.00 0.00 1.23 0.00 0.00 0.00 0.00 0.86 0.62 2.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00