Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	SFT2D1	Gene	0	76.02	50.02	30.54	45.02	54.96	69.75	43.81	30.68	28.61	36.11	156.70	117.37	96.18	142.87	160.58	170.77	161.35	17.06	19.16	30.77	35.51	80.21	57.75
2	361731	Transcript	1	13.49	4.83	3.33	2.55	9.91	8.29	7.99	8.76	1.76	8.18	84.34	21.95	11.26	61.29	72.26	36.31	67.68	1.66	1.86	1.58	55.55	32.46	21.24
3	478705	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	487841	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	361526	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	488773	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	494682	Transcript	1	25.91	25.60	10.70	22.87	16.02	32.36	31.52	13.15	22.16	27.72	63.89	61.85	72.32	61.76	17.93	95.28	65.55	17.36	17.19	40.98	21.45	38.36	47.77
8	479490	Transcript	1	20.06	27.24	11.21	36.67	28.86	46.80	32.89	13.81	16.98	19.02	46.51	75.54	77.54	33.45	31.33	43.76	38.80	2.71	3.96	14.01	4.45	19.86	11.47
9	ER1a	ExonRegion	0	12.04	3.56	0.69	0.43	12.04	15.24	7.61	0.43	0.93	1.00	7.85	0.00	0.00	11.47	13.24	24.89	5.36	4.97	2.79	1.99	13.08	13.41	17.80
10	E1_Ac	KnownBoundary	1	49.27	8.75	0.00	0.00	48.90	73.82	36.35	4.19	0.00	1.64	26.90	6.30	0.00	25.60	27.57	84.25	22.44	7.46	8.85	5.94	47.14	49.54	60.61
11	ER1b	ExonRegion	1	115.90	34.36	3.63	1.36	120.87	187.68	73.23	1.73	3.45	2.29	113.71	15.53	30.24	132.84	172.67	170.64	90.95	9.49	18.78	22.45	96.96	109.28	138.43
12	E1_Ad	KnownBoundary	1	398.44	140.63	24.16	27.84	375.04	567.00	209.91	25.26	23.47	33.01	362.41	19.66	60.55	262.99	325.73	488.08	285.93	52.36	42.26	62.57	182.31	271.33	395.74
13	ER1c	ExonRegion	1	217.09	89.19	3.68	1.36	248.46	388.24	156.61	1.73	4.23	3.44	263.70	30.31	89.78	337.58	545.44	334.58	213.14	16.37	31.85	40.43	190.46	225.62	257.59
14	ER1d	ExonRegion	0	73.29	33.39	8.17	5.10	66.54	101.93	42.44	7.10	6.86	12.27	131.15	49.20	35.31	133.06	233.78	209.74	155.22	6.25	8.45	14.08	74.38	83.74	78.17
15	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.37	2.63	0.00	0.00	0.00	0.00	0.00	9.54	1.70	0.00	0.00	17.17	0.00	0.00
16	E1a_E2a	KnownJunction	0	0.00	6.58	5.17	6.86	0.00	10.56	2.25	4.07	8.77	14.48	7.84	0.00	0.00	0.00	10.75	0.00	9.26	4.89	0.00	12.46	3.09	0.00	0.00
17	E1a_E3a	KnownJunction	1	6.22	0.00	5.62	2.96	8.66	0.00	6.76	12.90	4.20	19.10	243.96	53.42	20.29	166.11	185.06	81.43	197.66	0.00	0.00	2.75	153.58	73.54	45.93
18	I1	Intron	0	8.59	1.92	3.09	4.20	6.77	3.92	10.37	5.50	4.62	6.63	18.76	26.46	37.45	22.35	15.06	33.82	36.27	2.49	5.96	6.48	13.22	6.83	12.76
19	I1_SR1	SilentIntronRegion	0	8.63	1.93	3.13	4.22	6.85	3.96	10.48	5.57	4.68	6.70	18.95	26.37	37.60	22.52	15.11	33.99	36.51	2.52	6.01	6.52	13.24	6.88	12.91
20	I1_AR1	ActiveIntronRegion	0	6.15	1.53	0.00	2.00	0.00	0.57	1.65	0.00	0.00	1.04	3.02	35.99	25.94	8.37	10.97	20.71	17.12	0.00	1.69	3.52	11.91	2.67	0.28
21	I1	Intron	0	9.88	2.41	4.83	3.71	11.11	3.53	8.80	5.66	5.37	4.65	35.34	23.55	26.89	27.46	18.88	37.31	35.65	3.45	3.70	6.84	12.96	9.52	9.07
22	I1_AR1	ActiveIntronRegion	1	7.06	2.14	3.99	3.18	7.65	3.73	6.91	5.09	5.37	4.14	38.72	10.19	14.74	28.68	16.72	37.21	35.41	5.12	5.06	8.57	18.02	6.05	9.18
23	I1_SR2	SilentIntronRegion	1	11.88	0.94	6.20	3.05	10.62	2.67	9.62	5.48	5.27	5.20	33.51	20.17	22.37	29.98	13.14	43.08	42.50	4.06	3.12	6.08	13.81	10.59	14.02
24	I1_AR2	ActiveIntronRegion	0	14.39	4.46	9.21	6.01	22.01	4.42	14.23	9.89	7.87	7.31	49.18	46.76	41.51	33.55	33.65	50.86	48.16	1.11	2.10	6.07	9.67	14.40	11.60
25	I1_SR3	SilentIntronRegion	0	12.64	1.65	0.70	3.49	8.73	2.93	7.48	2.32	2.76	2.87	11.17	41.55	56.69	17.34	10.76	19.83	18.90	1.42	2.67	4.50	2.97	14.78	2.83
26	I1_AR3	ActiveIntronRegion	0	10.96	2.03	0.00	0.17	3.64	1.69	8.05	1.06	0.48	0.62	2.43	20.54	25.74	11.33	12.35	9.07	9.65	2.42	2.70	0.00	0.00	11.27	0.00
27	E2a_E3a	KnownJunction	0	20.45	32.69	32.17	39.62	16.04	10.05	16.16	24.60	16.15	49.80	38.38	18.46	6.82	55.09	45.37	30.50	38.24	24.29	22.68	47.11	11.43	6.12	4.35
28	ER2a	ExonRegion	0	6.99	20.51	26.00	25.30	2.44	11.56	8.81	16.91	15.25	40.94	18.07	6.96	7.75	30.43	23.59	14.09	25.26	15.59	18.70	31.36	9.29	3.08	2.81
29	I2	Intron	0	11.32	0.84	0.86	1.43	7.07	2.91	4.51	1.06	1.95	2.41	14.65	32.69	40.82	19.75	10.81	18.16	18.23	0.65	0.56	2.50	7.51	10.41	8.97
30	I2_AR1	ActiveIntronRegion	1	11.95	0.95	0.29	1.62	6.68	3.09	4.43	2.05	1.66	1.56	9.49	45.00	63.74	16.53	6.46	15.10	10.70	0.44	0.00	1.89	1.85	11.37	6.52
31	I2_SR1	SilentIntronRegion	0	12.53	0.22	1.92	1.59	6.66	3.91	4.42	0.00	2.84	4.75	21.41	32.27	26.91	25.13	15.60	24.94	22.68	1.59	0.00	2.61	13.57	11.90	11.36
32	I2_AR2	ActiveIntronRegion	0	9.90	1.17	0.69	1.14	7.79	2.04	4.68	0.82	1.62	1.63	15.15	20.91	27.95	19.31	11.85	16.57	22.74	0.20	1.52	3.04	8.95	8.46	9.81
33	E3_Aa	NovelBoundary	0	31.71	0.00	0.00	2.06	7.64	2.67	0.00	8.83	5.58	0.00	15.27	12.60	21.43	14.89	23.86	32.38	13.28	0.00	3.58	5.82	14.58	19.29	8.62
34	ER3a	ExonRegion	1	53.55	34.85	56.97	69.65	43.18	61.91	27.86	70.31	50.13	80.01	851.68	182.58	135.42	610.87	659.95	574.30	963.33	71.30	79.19	93.96	220.29	335.49	290.69
35	E3a_E4a	KnownJunction	1	130.99	63.21	60.49	98.16	78.78	95.46	39.75	93.69	63.19	73.36	406.63	309.40	267.68	1206.43	1497.62	1669.82	627.96	107.99	85.56	75.10	63.63	685.26	729.17
36	I3	Intron	0	2.03	0.97	0.35	1.75	2.30	1.58	6.08	1.73	1.23	2.13	3.14	14.43	22.23	4.24	3.72	3.41	3.79	0.35	2.13	3.05	0.42	4.39	1.40
37	I3_SR1	SilentIntronRegion	0	2.03	0.98	0.35	1.76	2.31	1.59	6.10	1.73	1.24	2.13	3.16	14.48	22.31	4.26	3.74	3.43	3.80	0.35	2.14	3.07	0.42	4.40	1.41
38	E4_Aa	NovelBoundary	0	2.82	6.71	0.00	0.00	12.31	2.90	18.15	3.94	3.33	1.56	9.53	0.00	34.09	16.36	0.00	26.06	27.58	0.00	4.80	0.00	0.00	5.39	7.85
39	ER4a	ExonRegion	1	153.21	66.69	83.12	77.68	244.43	346.32	170.23	77.93	52.90	75.56	495.29	279.02	229.76	678.67	879.43	1369.33	536.93	59.93	51.70	65.68	139.07	393.68	382.01
40	E4a_E5a	KnownJunction	0	196.55	104.85	112.74	102.05	930.56	1128.90	460.04	75.62	52.23	86.50	633.84	344.81	268.98	673.32	786.08	723.49	807.39	28.15	49.51	84.24	151.29	314.56	219.55
41	E5_Aa	NovelBoundary	0	14.74	2.43	3.96	5.89	16.64	0.00	25.31	0.00	0.00	9.97	5.11	12.60	26.30	12.54	4.45	12.48	0.00	0.00	3.67	3.26	0.00	4.65	7.94
42	E5_Ab	NovelBoundary	1	293.83	130.11	71.61	89.43	219.02	232.31	202.09	65.23	58.33	76.21	585.89	195.36	146.09	435.75	525.25	398.10	478.82	23.38	29.08	43.53	92.85	226.75	79.64
43	ER5a	ExonRegion	0	228.36	123.30	111.44	101.79	554.72	728.98	348.34	76.87	64.16	94.05	770.82	337.70	213.03	643.32	744.40	670.45	801.94	31.70	38.06	66.07	144.52	309.02	176.35
44	ER5b	ExonRegion	0	277.33	169.59	104.29	99.75	208.07	225.41	141.22	89.52	67.83	106.73	922.58	669.97	598.84	686.95	798.86	655.38	797.87	31.00	39.29	70.58	178.61	368.12	166.36
45	E5_Da	NovelBoundary	1	13.34	2.89	1.12	13.35	20.54	25.95	23.05	4.07	8.42	11.09	15.37	25.96	67.37	31.20	0.00	20.76	18.05	0.00	4.05	19.24	2.78	8.14	7.34
46	E5a_E6a	KnownJunction	0	344.43	144.71	112.36	86.57	168.34	157.58	64.61	88.88	65.25	85.02	888.17	706.88	742.65	781.33	858.52	685.89	718.65	21.80	48.28	103.29	197.26	444.86	162.87
47	E5a_E7b	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.42	1.21	0.00	13.80	0.00	0.00	0.00	0.00	4.77	0.00	0.00	0.00	0.00	0.00	0.00
48	E5a_E8a	NovelJunction	0	3.78	2.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.48	7.11	6.15	0.00	2.30	4.45	8.63	13.18	0.00	0.00	0.00	0.00	4.96	4.35
49	I5	Intron	0	13.49	16.27	9.58	23.06	18.83	19.85	25.50	11.89	18.46	22.36	31.13	44.36	59.60	40.66	13.17	39.18	30.25	11.77	12.80	14.69	8.27	29.82	19.70
50	I5_SR1	SilentIntronRegion	1	13.00	16.13	10.03	23.79	19.26	19.69	26.44	12.47	18.41	22.80	32.23	43.75	61.06	40.44	12.79	39.89	31.55	12.59	12.70	15.58	8.78	28.56	18.63
51	I5_AR1	ActiveIntronRegion	0	15.81	17.04	7.65	19.97	17.06	20.71	21.46	9.38	18.77	20.55	26.40	47.41	53.47	41.89	14.95	36.26	24.65	8.21	13.34	10.85	6.01	35.67	24.60
52	E6_Aa	NovelBoundary	1	16.08	17.63	7.84	8.72	12.48	34.24	18.95	6.82	15.77	11.15	31.96	88.98	70.29	44.03	23.86	20.76	52.64	6.55	4.80	14.25	10.87	10.53	3.16
53	ER6a	ExonRegion	0	355.87	122.41	130.64	114.79	123.23	158.67	74.40	103.85	76.20	124.02	852.25	603.48	546.13	723.09	802.76	637.52	742.52	29.41	52.03	92.85	166.26	391.01	213.72
54	E6_Da	KnownBoundary	1	26.38	31.38	11.47	27.07	31.24	57.81	30.91	26.00	24.16	45.64	45.75	79.83	95.29	45.97	27.32	60.67	42.64	13.60	12.99	20.26	21.68	75.13	42.94
55	E6a_E7b	KnownJunction	0	452.97	130.70	101.71	101.79	132.43	116.41	87.00	84.37	41.38	96.22	710.02	462.75	377.25	715.64	900.18	594.46	711.27	21.22	48.38	61.10	119.54	350.07	210.16
56	ER6b	ExonRegion	1	25.91	25.60	10.70	22.87	16.02	32.36	31.52	13.15	22.16	27.72	63.89	61.85	72.32	61.76	17.93	95.28	65.55	17.36	17.19	40.98	21.45	38.36	47.77
57	E6_Db	NovelBoundary	0	9.56	30.26	19.48	51.04	19.61	71.95	36.88	24.19	40.16	36.53	60.96	55.67	51.62	33.73	19.66	73.66	60.87	51.53	4.42	46.21	22.73	33.13	28.34
58	I6	Intron	0	17.56	58.43	9.19	22.06	18.10	25.99	20.53	13.10	14.54	22.28	23.95	52.70	79.54	33.39	19.85	30.09	23.96	5.17	4.25	20.38	4.68	22.11	9.57
59	I6_AR3	ActiveIntronRegion	0	17.57	58.49	9.20	22.08	18.12	26.02	20.55	13.11	14.55	22.30	23.98	52.75	79.62	33.42	19.87	30.12	23.99	5.18	4.25	20.40	4.68	22.13	9.58
60	E7_Aa	NovelBoundary	1	37.64	35.78	10.44	24.57	33.70	48.67	26.50	13.02	20.98	19.74	25.74	93.78	74.02	26.78	23.49	27.51	18.23	4.35	26.54	14.64	8.65	49.84	14.43
61	ER7a	ExonRegion	1	20.06	27.24	11.21	36.67	28.86	46.80	32.89	13.81	16.98	19.02	46.51	75.54	77.54	33.45	31.33	43.76	38.80	2.71	3.96	14.01	4.45	19.86	11.47
62	E7_Ab	KnownBoundary	1	28.08	35.59	16.03	60.63	51.19	64.96	46.81	20.25	25.12	27.51	40.33	89.28	91.71	56.27	30.29	38.96	41.51	0.00	3.67	37.52	2.35	20.88	7.68
63	ER7b	ExonRegion	0	326.64	79.56	115.33	168.88	125.62	122.96	74.12	141.58	101.62	133.57	778.09	521.92	366.07	667.93	795.29	521.20	749.59	24.31	49.15	72.34	97.23	351.65	163.03
64	E7_Da	KnownBoundary	0	16.89	28.61	12.33	28.80	18.93	18.23	22.04	22.30	33.45	29.01	52.80	49.07	33.28	42.85	24.11	62.89	51.52	7.30	12.42	26.91	14.95	32.33	11.10
65	E7a_E7c	KnownJunction	0	336.13	77.16	66.41	107.51	149.75	137.08	103.69	105.31	75.61	76.02	870.48	597.94	442.50	599.74	719.21	527.47	886.67	8.54	51.11	44.81	128.62	342.79	191.30
66	ER7c	ExonRegion	0	26.65	46.63	12.32	29.26	37.79	37.35	28.44	19.94	20.41	23.32	48.12	48.39	50.52	57.28	30.76	65.94	65.62	13.61	14.66	24.67	15.98	18.69	14.18
67	E7_Db	KnownBoundary	0	50.75	53.87	14.55	22.81	28.18	55.99	46.94	25.71	26.53	23.40	49.75	6.30	33.44	56.04	46.11	63.83	50.21	5.97	8.38	25.76	11.24	17.88	34.49
68	ER7d	ExonRegion	0	50.16	54.14	25.35	44.56	39.40	40.15	33.96	22.92	27.86	30.82	60.45	50.54	49.40	56.62	42.72	69.78	62.15	17.63	15.78	27.44	13.50	26.48	24.06
69	E7_Dc	NovelBoundary	0	16.45	64.79	4.14	13.88	12.22	7.38	8.79	3.90	11.46	15.63	12.74	12.60	27.60	19.31	9.27	14.95	0.00	2.40	4.52	8.12	5.25	10.72	4.35
70	E7c_E8a	KnownJunction	0	347.02	103.40	109.10	114.17	251.02	209.99	105.73	106.83	70.54	104.28	801.20	827.22	371.57	572.55	774.96	700.41	822.53	8.33	54.21	65.45	121.70	477.44	161.34
71	ER7e	ExonRegion	0	305.80	100.84	118.27	169.56	236.30	201.40	105.46	146.80	94.34	128.93	932.12	719.74	431.48	634.08	864.47	671.29	932.22	14.27	56.02	66.32	157.45	444.22	205.56
72	E8_Aa	NovelBoundary	1	48.08	60.45	49.29	61.23	57.64	49.57	25.97	25.88	20.37	40.37	27.27	23.56	74.67	26.25	29.17	16.06	25.99	2.57	4.52	24.03	0.00	34.29	15.45
73	ER8a	ExonRegion	0	137.45	56.34	91.53	106.44	83.95	110.92	68.79	84.83	62.80	83.10	422.16	533.81	408.92	365.84	538.11	420.25	437.29	9.22	30.28	44.41	53.50	245.83	112.00
74	E8_Da	KnownBoundary	0	233.60	153.06	105.47	147.37	103.82	128.39	78.04	85.68	64.87	85.99	419.95	387.73	340.56	227.91	463.81	278.82	504.16	5.72	22.49	36.37	44.23	104.77	105.00
75	ER8b	ExonRegion	1	124.06	47.77	34.20	53.76	39.70	107.62	51.87	41.32	25.78	32.84	98.73	271.00	124.65	169.99	258.44	158.20	141.71	4.63	19.54	16.32	12.79	116.76	52.74
76	E8_Db	KnownBoundary	1	176.11	118.20	13.33	21.91	51.44	142.65	74.28	8.79	6.74	2.98	7.21	55.97	39.28	0.00	5.19	14.36	8.51	3.69	4.71	2.81	2.84	0.00	16.30
77	ER8c	ExonRegion	0	126.00	33.08	1.98	2.84	29.99	62.01	28.13	5.43	0.65	1.30	0.25	7.60	4.22	1.99	6.03	1.33	0.00	0.51	0.36	0.00	0.00	4.48	1.26
78	E8_Dc	KnownBoundary	0	62.23	6.64	10.47	5.19	4.33	0.00	0.00	3.70	1.33	5.43	2.68	0.00	14.28	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.97	2.63	0.00
79	ER8d	ExonRegion	0	29.56	6.66	2.77	4.11	3.82	4.66	3.74	9.12	0.80	3.88	1.17	6.84	5.82	2.40	8.05	1.05	0.00	0.00	1.13	0.00	0.00	6.12	0.00
80	ER8e	ExonRegion	0	22.22	10.93	3.68	4.26	9.03	9.63	9.60	12.96	0.15	4.44	1.21	12.45	13.48	6.29	18.50	2.60	0.00	0.00	2.79	0.00	0.00	10.42	0.00
81	IG23_AR2	ActiveIntergenicRegion	0	0.00	0.33	0.00	0.31	0.00	0.00	0.00	0.00	0.00	0.28	0.00	0.00	3.18	0.87	0.95	0.35	14.11	0.00	0.00	0.00	0.00	0.00	0.00
82	IG23_SR1	SilentIntergenicRegion	0	0.31	0.20	1.32	0.00	0.13	0.00	0.13	0.00	0.18	0.16	0.22	0.52	11.17	0.96	0.62	2.33	12.01	0.27	0.00	0.00	0.00	0.00	0.00
83	IG23_AR1	ActiveIntergenicRegion	0	0.00	0.00	1.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.06	0.00	2.78	0.00	3.26	2.37	19.65	0.00	0.00	0.00	0.00	0.00	0.00