Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C6orf124 Gene 0 6.72 21.56 15.78 12.85 9.88 45.02 11.64 32.65 24.48 20.34 0.88 1.27 2.19 1.22 3.81 3.21 1.57 5.06 4.54 15.02 1.24 1.35 2.35 2 359760 Transcript 0 9.03 25.36 20.34 16.84 13.51 44.21 14.85 41.45 30.03 25.61 1.43 2.14 3.63 1.81 5.66 4.97 2.52 7.10 7.02 19.35 1.85 1.93 3.51 3 357510 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 414943 Transcript 0 0.00 0.00 3.08 1.76 0.00 7.61 2.21 6.12 5.73 4.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 417244 Transcript 0 0.00 0.35 0.62 0.37 0.00 2.81 0.69 2.94 0.61 0.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.61 2.20 0.00 0.35 0.00 6 425438 Transcript 0 0.00 3.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1a ExonRegion 0 0.00 0.57 1.80 2.18 0.86 3.29 0.29 5.06 5.71 7.19 0.00 0.00 0.00 0.27 0.00 0.00 0.00 0.00 0.54 6.62 0.00 0.00 0.59 8 E1_Ab KnownBoundary 0 0.00 3.29 8.43 2.03 4.33 26.06 0.00 31.54 13.14 19.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.76 15.21 0.00 0.00 0.00 9 ER1b ExonRegion 0 0.00 2.40 3.16 1.62 0.73 31.58 2.14 11.86 5.52 13.81 0.00 0.00 0.00 0.00 0.00 2.08 0.00 0.00 0.35 6.59 0.00 0.00 2.05 10 E1_Da KnownBoundary 0 3.56 15.19 1.83 2.06 0.00 49.18 3.36 8.46 9.17 7.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 0.00 8.95 0.00 0.00 0.00 11 E1a_E1c KnownJunction 0 0.00 0.00 3.08 1.76 0.00 7.61 2.21 6.12 5.73 4.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER1c ExonRegion 0 1.67 7.99 2.11 2.22 0.00 23.67 5.70 6.43 8.42 8.35 0.00 0.00 0.00 0.00 0.94 0.00 0.00 0.00 0.00 7.82 0.00 0.00 2.32 13 E1_Ac KnownBoundary 0 9.56 18.09 1.80 7.19 0.00 13.17 6.36 6.45 12.04 8.81 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 11.63 0.00 0.00 4.18 14 ER1d ExonRegion 0 2.89 7.90 8.50 2.31 2.65 13.76 3.67 15.07 11.56 10.76 0.00 0.00 0.00 0.42 0.86 0.70 0.00 1.77 0.83 9.55 0.35 0.18 0.08 15 E1_Db KnownBoundary 0 7.56 33.68 28.30 7.59 12.90 31.91 19.25 37.58 34.69 29.09 0.00 0.00 0.00 0.00 4.45 0.00 0.00 8.71 4.42 10.87 0.00 0.00 0.00 16 ER1e ExonRegion 0 6.50 17.47 22.15 11.54 5.46 46.76 9.03 36.30 24.15 23.60 0.00 0.00 0.00 0.00 2.85 0.66 0.00 2.69 3.79 15.33 0.51 0.84 0.00 17 E1_Ad KnownBoundary 0 11.04 17.83 37.23 17.68 8.57 59.68 13.78 60.95 40.10 35.67 0.00 0.00 0.00 0.00 4.45 0.00 0.00 3.48 4.42 23.52 0.00 0.00 0.00 18 ER1f ExonRegion 0 5.64 27.26 25.65 15.02 10.80 37.61 11.96 47.43 39.07 28.27 0.00 0.00 0.00 0.00 0.61 0.00 0.00 5.54 1.17 25.38 1.89 0.11 0.00 19 E1_Dc NovelBoundary 0 0.00 12.17 1.83 5.73 3.90 8.01 16.12 2.55 11.31 9.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E1c_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.00 0.00 0.00 0.00 21 E1c_E4a KnownJunction 0 6.74 14.93 23.27 14.52 14.94 25.27 8.39 47.69 33.54 27.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.10 0.00 14.89 0.00 0.00 0.00 22 E2_Aa NovelBoundary 0 3.63 3.29 4.85 3.66 8.23 19.48 3.89 6.33 5.82 9.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.39 0.00 0.00 0.00 23 ER2a ExonRegion 0 0.00 1.04 1.86 1.01 0.00 8.42 2.01 6.48 1.84 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 3.60 0.00 1.06 0.00 24 ER3a ExonRegion 0 0.00 0.00 0.00 0.11 0.00 0.00 0.06 0.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.27 0.00 0.00 0.00 0.00 25 I3 Intron 0 1.46 2.34 3.78 2.33 4.30 21.08 5.78 7.10 5.07 7.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.06 0.73 4.40 0.00 0.00 2.02 26 I3_SR1 SilentIntronRegion 0 1.47 2.36 3.81 2.35 4.34 21.27 5.83 7.16 5.12 7.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.07 0.74 4.44 0.00 0.00 2.04 27 E4_Aa NovelBoundary 0 3.78 2.43 4.76 0.00 0.00 27.43 21.24 10.51 5.76 10.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.41 0.00 0.00 0.00 28 ER4a ExonRegion 0 4.10 29.09 21.91 14.58 11.92 34.79 14.96 46.14 30.24 30.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.58 8.30 23.21 0.00 0.00 0.00 29 E4_Ab KnownBoundary 0 5.85 57.23 31.67 17.71 17.06 61.21 29.85 57.50 27.20 38.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 13.55 36.43 0.00 0.00 0.00 30 ER4b ExonRegion 0 8.68 41.63 24.44 18.22 18.83 102.04 19.10 54.41 38.94 35.21 0.00 0.00 0.00 0.14 1.09 0.00 0.88 7.64 3.77 23.03 0.00 0.25 1.57 31 E4_Da KnownBoundary 0 3.78 31.44 27.50 28.33 23.77 118.97 38.91 68.47 44.27 48.27 0.00 0.00 0.00 2.77 0.00 0.00 0.00 6.43 0.00 22.88 0.00 3.12 0.00 32 E4a_E4c KnownJunction 0 0.00 3.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER4c ExonRegion 0 8.00 44.92 35.20 37.43 17.59 108.17 24.48 84.64 50.12 36.57 0.56 0.00 0.67 0.16 0.88 0.00 0.00 2.60 5.84 20.86 0.00 1.06 0.00 34 E4_Ac KnownBoundary 0 6.96 39.20 10.08 19.24 20.03 66.72 10.69 54.46 40.88 38.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.63 0.00 0.00 0.00 35 ER4d ExonRegion 0 6.15 34.05 18.61 19.85 18.21 80.13 11.55 37.67 45.50 27.34 0.00 0.00 0.00 0.00 0.89 0.00 0.00 1.99 2.75 5.43 0.00 0.62 0.00 36 E4_Db KnownBoundary 0 8.67 49.86 14.58 25.20 20.80 68.20 9.23 34.13 49.31 24.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.11 0.00 2.88 0.00 37 ER4e ExonRegion 0 28.84 45.21 17.70 20.80 30.31 46.96 31.92 28.90 36.43 28.20 8.00 12.82 21.11 10.46 30.24 29.15 15.12 30.63 23.63 35.19 10.57 9.69 20.49