Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP1-274L14.1 Gene 0 4.75 10.48 5.22 7.85 8.83 3.64 19.38 20.45 11.33 18.24 2.04 7.64 11.88 1.52 4.34 9.65 18.29 3.84 10.10 13.27 2.05 0.54 4.77 2 344851 Transcript 0 2.72 5.04 3.41 5.12 5.71 2.51 12.74 12.54 7.74 11.23 1.09 3.95 8.32 1.04 3.17 6.80 11.77 2.49 7.04 8.65 1.12 0.42 2.86 3 396269 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 IG5 Intergenic 0 5.36 7.64 5.05 7.45 7.28 2.96 19.03 9.45 5.92 7.58 1.06 5.73 10.59 0.95 3.01 6.56 10.40 2.82 6.49 11.08 1.29 0.36 4.06 5 IG5_SR10 SilentIntergenicRegion 0 4.63 8.57 4.25 6.43 6.33 2.51 17.91 11.39 7.15 8.55 0.59 6.05 10.39 0.75 3.54 6.70 8.45 3.23 4.44 11.10 1.40 0.23 4.02 6 IG5_AR9 ActiveIntergenicRegion 0 5.25 7.77 8.92 6.06 8.66 3.38 17.36 9.78 6.22 6.34 0.43 4.60 7.92 0.66 2.09 6.57 7.67 4.16 2.72 11.10 3.14 0.00 7.88 7 IG5_AR8 ActiveIntergenicRegion 0 4.54 9.76 7.13 10.87 7.95 2.01 20.03 12.26 5.63 9.98 0.62 6.56 8.93 0.69 1.58 5.71 5.71 2.51 4.07 8.73 0.60 0.57 1.11 8 IG5_SR8 SilentIntergenicRegion 0 7.70 5.89 9.42 10.82 14.38 1.91 16.37 12.63 3.99 8.80 1.04 6.61 15.19 0.66 2.76 4.47 10.86 2.78 5.05 9.39 0.51 0.48 2.47 9 IG5_AR7 ActiveIntergenicRegion 0 13.76 24.73 10.93 12.30 19.31 5.68 20.18 20.03 5.15 14.24 0.42 2.45 10.32 1.25 1.92 4.89 8.55 4.19 5.92 11.26 0.73 0.46 5.74 10 IG5_AR6 ActiveIntergenicRegion 0 8.85 13.65 8.53 7.51 9.74 0.55 22.98 17.77 4.07 8.37 0.29 2.84 4.32 0.48 5.57 9.31 10.42 6.31 6.29 11.25 0.66 0.31 4.64 11 IG5_SR6 SilentIntergenicRegion 0 7.02 8.64 4.29 5.94 6.32 1.28 17.65 11.04 5.75 7.86 1.25 4.97 13.02 0.99 2.69 5.45 8.91 1.50 4.32 9.54 0.47 0.00 2.70 12 IG5_AR5 ActiveIntergenicRegion 0 5.97 9.44 6.98 9.12 8.43 3.24 22.13 10.81 5.85 11.66 0.96 3.84 11.10 1.12 4.79 10.21 12.87 6.08 10.42 13.26 3.42 0.59 5.73 13 IG5_AR4 ActiveIntergenicRegion 0 1.71 2.80 3.55 5.28 6.68 2.86 16.10 9.42 3.76 4.51 4.04 3.77 3.51 1.25 3.66 8.56 16.19 4.50 8.72 11.89 1.89 2.52 5.22 14 IG5_SR4 SilentIntergenicRegion 0 4.12 6.32 4.25 7.66 6.19 3.38 19.54 7.34 5.29 6.54 1.19 5.62 10.47 1.12 2.59 7.28 13.21 2.53 8.53 11.65 1.53 0.35 3.97 15 IG5_AR3 ActiveIntergenicRegion 0 12.97 9.97 6.00 9.36 8.72 3.43 28.71 11.43 6.86 5.02 0.43 6.90 14.56 0.20 2.09 4.57 4.20 0.44 4.63 13.49 0.04 0.64 3.85 16 IG5_SR3 SilentIntergenicRegion 0 17.81 8.13 7.25 10.56 0.00 0.00 11.92 3.17 10.50 5.26 1.93 0.00 6.25 0.00 0.00 8.17 10.45 1.85 9.56 17.38 2.20 0.00 8.81 17 IG5_AR2 ActiveIntergenicRegion 0 19.28 3.23 11.16 10.94 5.64 0.00 13.28 7.65 8.39 8.99 2.57 3.02 11.63 0.93 3.78 4.76 11.08 2.68 9.95 20.43 1.00 0.00 8.45 18 IG5_SR2 SilentIntergenicRegion 0 10.03 9.02 6.02 7.11 7.65 3.74 21.51 5.58 6.48 3.94 1.66 5.57 12.34 1.52 3.55 5.16 7.35 3.02 6.22 10.63 0.73 0.17 5.84 19 IG5_AR1 ActiveIntergenicRegion 0 10.05 7.03 10.20 12.06 12.18 3.71 33.05 9.91 10.09 12.18 2.90 5.01 24.35 2.17 7.32 8.86 16.98 3.04 13.55 15.51 3.09 0.42 7.54 20 IG5_SR1 SilentIntergenicRegion 0 5.72 4.84 4.80 8.29 7.39 2.94 20.14 8.11 5.85 6.41 1.15 7.29 13.42 0.85 2.43 3.48 7.47 0.88 5.19 9.98 0.06 0.40 2.13 21 ER1a ExonRegion 0 2.62 6.72 6.34 9.32 5.54 3.59 16.83 14.28 10.00 14.07 1.51 6.10 7.96 1.30 4.47 10.65 20.70 5.56 10.52 16.57 1.48 0.82 5.59 22 E1_Da NovelBoundary 0 3.48 19.47 9.11 11.39 24.45 6.47 16.08 8.75 9.35 9.05 6.48 10.95 0.00 4.47 9.52 18.71 8.13 7.01 0.00 6.52 5.00 2.33 3.16 23 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E2_Aa NovelBoundary 0 3.11 5.99 0.00 1.73 14.26 0.00 12.01 9.49 1.10 0.00 0.00 6.30 0.00 2.24 0.00 19.99 8.60 0.00 7.72 11.19 2.72 0.00 3.41 25 ER2a ExonRegion 0 5.55 8.40 3.91 6.05 11.59 3.95 21.39 23.35 13.23 19.62 1.76 5.75 16.99 1.83 5.03 9.75 14.62 1.93 10.59 9.40 1.87 0.44 2.99 26 E2_Ab KnownBoundary 0 827.26 833.80 366.28 481.02 441.68 548.26 469.54 301.40 325.81 517.20 597.15 107.74 187.97 69.87 111.87 470.47 637.21 291.00 581.38 501.30 312.47 680.24 385.67 27 ER2b ExonRegion 0 7.41 18.13 4.58 7.05 11.66 3.45 21.69 27.69 11.84 23.62 3.11 11.63 13.76 1.60 3.55 8.01 17.59 2.74 9.02 11.35 3.08 0.18 4.97 28 IG4_AR3 ActiveIntergenicRegion 0 31.14 74.60 49.02 65.82 42.83 55.60 6.58 36.87 68.43 23.45 2.50 0.73 3.07 2.66 1.49 2.95 2.95 7.13 18.37 23.90 2.84 7.25 3.80 29 IG4_SR3 SilentIntergenicRegion 0 6.97 45.56 28.88 59.42 41.26 42.77 12.39 25.46 51.91 17.12 1.53 1.61 2.04 2.19 3.06 1.18 0.00 4.12 10.07 22.72 0.58 5.49 4.26 30 IG4_AR2 ActiveIntergenicRegion 0 16.77 118.48 22.91 52.63 34.45 48.73 15.51 27.21 59.24 24.82 2.55 12.15 5.24 1.37 2.45 1.96 0.54 2.12 16.30 21.77 5.82 6.88 2.42 31 IG4_AR1 ActiveIntergenicRegion 0 7.35 25.60 14.03 26.50 19.94 25.12 6.31 12.04 36.46 12.34 1.43 5.23 1.56 1.24 1.09 0.96 1.07 2.30 7.37 10.93 1.43 4.53 3.94 32 IG4_SR1 SilentIntergenicRegion 0 10.43 29.46 24.34 30.60 19.38 38.26 11.13 14.93 33.07 13.87 0.00 2.29 4.48 1.85 0.59 1.72 0.00 1.33 4.62 9.86 0.64 3.02 0.85