Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	WTAP	Gene	0	136.79	149.38	92.84	118.11	160.29	143.89	135.86	116.74	96.78	121.74	156.53	186.23	126.25	138.78	141.04	117.86	132.56	46.93	87.86	90.44	99.26	300.96	195.00
2	358372	Transcript	0	183.73	189.23	126.80	161.71	181.98	123.91	147.62	136.83	111.31	143.56	161.16	169.25	134.17	224.03	194.14	153.42	207.37	89.88	83.30	103.82	134.50	243.36	196.68
3	401980	Transcript	0	10.58	6.10	1.23	4.09	0.00	18.34	2.65	1.73	3.71	1.15	3.87	12.99	0.00	3.25	5.80	0.00	9.90	1.85	0.00	0.00	0.00	10.42	2.94
4	494513	Transcript	0	22.50	14.25	6.45	2.45	40.08	134.10	63.03	5.05	6.35	8.74	37.36	1.52	5.82	30.87	11.11	54.59	40.68	5.37	60.76	9.40	97.35	22.26	95.98
5	337387	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	462110	Transcript	0	34.83	14.59	6.67	9.20	28.05	9.42	25.37	27.85	13.67	16.93	13.78	28.87	20.70	23.01	23.60	29.95	26.97	12.00	13.73	14.40	26.28	96.52	66.55
7	IG31	Intergenic	0	10.22	18.08	18.28	25.00	28.99	7.78	16.22	10.92	7.26	9.56	2.28	18.48	6.44	9.65	11.56	8.05	7.00	4.65	13.89	17.54	2.85	9.82	10.38
8	IG31_AR1	ActiveIntergenicRegion	0	34.05	25.11	68.76	97.10	63.08	10.57	23.05	32.46	22.91	25.92	6.61	45.48	15.01	18.74	24.85	10.93	13.00	10.46	41.08	44.38	7.82	24.82	22.06
9	IG31_SR1	SilentIntergenicRegion	0	6.58	17.03	10.56	13.97	23.80	7.36	15.19	7.63	4.87	7.06	1.62	14.36	5.13	8.26	9.54	7.62	6.09	3.77	9.73	13.45	2.09	7.53	8.60
10	ER1a	ExonRegion	0	22.99	27.72	51.23	52.78	35.60	21.85	37.35	28.21	20.06	48.30	22.32	49.26	22.97	41.20	45.66	25.24	32.35	17.11	28.38	43.82	21.21	35.25	28.74
11	E1_Ab	KnownBoundary	0	15.93	5.46	14.67	7.49	14.77	86.54	22.92	11.54	10.91	11.93	25.37	5.85	6.49	37.85	53.40	40.67	11.87	18.16	20.89	17.39	17.98	17.45	44.99
12	ER1b	ExonRegion	1	20.49	26.47	17.64	11.91	20.85	84.21	34.91	18.96	13.06	35.32	56.86	9.11	9.51	82.05	69.29	53.47	66.31	18.70	43.35	53.93	43.29	25.26	40.67
13	E1_Da	NovelBoundary	0	13.85	21.18	15.20	2.06	3.74	36.46	23.10	1.73	7.44	8.81	27.48	0.00	0.00	24.55	38.82	57.68	61.06	28.15	35.01	27.80	64.00	31.47	52.33
14	E1a_E3a	KnownJunction	1	6.15	30.59	41.66	29.73	26.49	34.58	16.30	43.99	30.84	69.87	178.10	36.01	36.20	171.64	138.70	144.92	102.20	27.77	101.65	129.56	62.70	61.11	70.68
15	E2_Aa	NovelBoundary	0	13.85	5.99	3.84	1.43	26.83	102.04	48.27	3.49	1.39	8.73	36.96	0.00	0.00	12.42	4.33	11.45	36.28	10.24	26.92	0.00	24.90	7.65	23.05
16	ER2a	ExonRegion	1	39.78	21.65	3.66	0.00	73.38	267.52	116.51	2.34	6.93	14.38	74.70	0.00	7.71	60.73	19.62	107.60	80.56	10.52	113.11	13.81	193.63	35.91	183.07
17	E2_Ab	KnownBoundary	1	52.90	22.10	8.93	3.56	70.29	136.34	111.95	21.36	22.83	51.41	66.81	0.00	6.49	9.42	17.92	57.93	94.90	27.28	80.76	13.81	203.19	57.38	200.86
18	ER2b	ExonRegion	1	25.05	15.88	17.30	8.89	14.10	23.63	20.65	23.61	20.03	38.07	67.01	3.46	10.81	42.28	36.88	29.77	77.30	10.99	27.62	17.30	120.32	82.94	137.51
19	E2a_E3a	KnownJunction	1	11.19	15.66	42.52	13.29	7.89	17.55	11.04	39.84	36.57	62.96	257.80	12.45	32.63	108.66	81.83	32.21	265.08	19.44	50.73	67.24	356.83	95.52	67.78
20	I2	Intron	0	17.46	14.83	15.61	12.81	15.53	5.05	17.48	15.38	9.91	7.04	3.28	13.81	9.77	2.09	5.37	9.18	9.48	2.44	6.45	10.90	8.43	14.53	45.05
21	I2_AR3	ActiveIntronRegion	0	36.95	24.46	25.35	21.27	24.89	7.74	23.07	27.35	14.37	12.49	4.49	17.84	13.63	1.92	7.35	14.26	12.32	4.02	8.95	14.64	11.70	20.96	72.45
22	I2_AR4	ActiveIntronRegion	0	41.41	40.01	36.70	27.59	25.87	9.35	28.16	27.08	13.86	9.69	3.69	13.99	14.44	1.90	12.44	12.69	9.42	2.31	8.40	13.50	6.99	14.68	55.95
23	I2_AR5	ActiveIntronRegion	0	51.45	34.48	42.54	23.65	25.30	3.23	34.37	24.42	16.37	10.50	2.65	26.57	18.80	3.23	10.87	12.89	15.21	3.68	7.96	11.35	10.12	27.71	51.93
24	I2_AR6	ActiveIntronRegion	0	36.54	34.30	37.83	25.80	22.04	13.69	50.37	24.73	20.56	5.87	5.26	20.58	10.78	0.53	12.85	14.68	24.18	7.20	6.65	15.29	6.40	25.46	64.17
25	I2_AR7	ActiveIntronRegion	0	23.43	16.41	34.49	11.88	41.09	3.67	48.99	22.35	15.26	6.39	4.00	26.90	18.09	1.39	6.84	11.46	15.33	3.70	12.06	4.10	6.14	26.79	64.40
26	I2_AR8	ActiveIntronRegion	0	19.84	11.69	34.16	15.08	39.13	1.15	29.87	30.14	17.75	8.10	4.59	19.48	25.50	3.55	7.62	8.54	10.52	3.35	12.94	10.51	6.75	23.05	51.76
27	I2_AR9	ActiveIntronRegion	0	18.58	23.27	28.32	19.23	35.68	1.83	30.75	36.49	19.35	10.19	5.80	22.13	22.41	4.87	10.96	14.86	7.70	1.85	12.74	16.78	12.00	22.22	31.32
28	I2_AR10	ActiveIntronRegion	0	15.72	22.37	24.51	23.36	26.76	3.14	24.59	32.84	22.23	8.03	5.80	26.60	32.83	4.64	10.36	11.89	13.68	1.85	9.10	23.10	11.65	16.97	41.11
29	I2_AR11	ActiveIntronRegion	0	22.22	19.32	23.65	26.30	16.32	3.67	27.94	28.69	22.60	6.54	5.41	23.38	23.92	3.41	15.38	14.27	19.81	2.22	17.52	23.40	10.58	30.63	55.21
30	I2_SR3	SilentIntronRegion	0	13.36	10.40	13.29	13.33	14.25	5.00	16.11	11.46	7.14	4.48	2.28	12.06	9.45	2.67	6.79	9.74	7.12	1.53	8.08	10.53	7.22	13.79	46.05
31	ER3a	ExonRegion	0	41.49	88.30	124.12	98.31	85.55	139.80	98.67	146.15	138.33	211.42	427.63	228.09	174.89	321.83	248.67	242.62	372.13	96.96	197.16	215.51	354.74	289.01	331.76
32	E3_Da	KnownBoundary	0	3.78	8.81	1.83	1.73	0.00	0.00	20.71	0.00	0.00	0.00	0.00	12.60	0.00	0.00	5.19	8.37	0.00	0.00	8.00	3.26	0.00	17.27	7.94
33	E3a_E4a	KnownJunction	0	80.68	134.06	132.22	130.02	182.34	242.42	196.08	177.03	172.54	226.98	430.16	425.09	233.91	336.28	261.95	347.09	363.63	115.24	284.90	280.66	290.11	401.51	535.91
34	ER3b	ExonRegion	0	5.21	6.86	9.25	4.90	6.77	0.68	9.55	7.76	5.78	3.09	0.02	3.04	3.94	1.01	2.60	1.57	0.80	0.22	8.42	4.99	1.07	8.60	8.89
35	ER4a	ExonRegion	0	68.56	117.44	149.41	128.50	181.90	240.23	140.46	196.89	204.41	246.93	419.78	324.32	309.71	325.52	221.53	385.16	332.21	156.27	285.37	210.87	229.15	450.00	715.33
36	E4_Da	NovelBoundary	0	6.74	2.76	13.16	11.05	21.39	5.05	16.87	22.51	12.33	14.05	7.00	12.30	20.13	9.77	4.82	27.69	4.58	0.00	8.09	9.14	3.15	105.51	70.94
37	E4a_E5b	KnownJunction	0	82.01	111.62	125.99	122.96	280.56	294.83	168.88	194.03	188.54	207.03	425.11	397.63	516.85	262.11	231.41	396.22	310.14	134.85	197.84	205.43	192.19	534.51	909.89
38	E4a_E6a	NovelJunction	0	3.19	3.35	5.12	2.00	3.74	0.00	0.00	0.00	10.01	7.44	4.90	0.00	0.00	10.07	0.00	7.69	4.21	0.00	0.00	6.14	6.05	9.00	28.08
39	I4	Intron	0	15.36	9.05	9.31	11.52	20.89	6.78	25.91	27.55	18.92	17.34	10.11	43.23	32.83	14.17	15.18	21.11	22.33	2.37	8.12	15.56	8.94	117.65	50.89
40	I4_AR1	ActiveIntronRegion	1	6.88	8.40	11.85	10.49	14.24	5.15	20.89	16.37	15.48	13.62	4.00	39.89	23.04	10.35	5.52	13.62	8.30	1.91	5.65	9.40	3.21	97.11	35.98
41	I4_AR4	ActiveIntronRegion	1	5.65	7.18	8.32	9.42	14.31	6.57	21.76	22.98	25.47	19.96	9.57	64.19	32.85	16.29	12.33	18.55	15.15	0.00	6.04	7.96	4.13	119.96	52.97
42	I4_AR5	ActiveIntronRegion	0	19.59	2.44	0.70	10.24	11.24	1.31	20.96	13.04	8.65	9.24	7.90	31.05	34.30	11.18	15.42	12.23	9.81	0.00	3.55	4.50	0.00	92.81	39.52
43	I4_SR2	SilentIntronRegion	0	18.30	10.15	9.10	12.37	21.32	6.06	26.28	29.52	19.39	19.52	10.76	37.95	32.59	15.29	15.13	23.77	24.90	3.26	8.43	16.14	11.37	129.82	53.87
44	I4_AR6	ActiveIntronRegion	0	25.86	10.90	11.33	14.81	35.83	12.26	38.83	44.84	21.22	18.95	16.73	48.44	45.83	16.32	27.04	28.49	39.71	2.85	12.62	28.89	14.63	127.41	65.28
45	E5_Aa	NovelBoundary	0	16.82	11.97	6.33	8.36	16.30	8.18	28.26	34.83	14.93	20.95	6.84	31.51	6.82	22.25	20.15	34.01	29.64	11.48	50.07	26.53	19.89	108.93	53.95
46	ER5a	ExonRegion	0	34.83	14.59	6.67	9.20	28.05	9.42	25.37	27.85	13.67	16.93	13.78	28.87	20.70	23.01	23.60	29.95	26.97	12.00	13.73	14.40	26.28	96.52	66.55
47	E5_Ab	KnownBoundary	0	60.31	19.40	8.43	9.89	20.12	10.62	43.19	21.03	14.21	19.39	0.00	45.76	31.49	14.24	32.14	15.47	8.04	7.01	7.44	20.65	14.64	63.38	46.01
48	ER5b	ExonRegion	0	154.62	156.20	183.19	176.02	299.36	561.46	289.24	293.78	258.80	295.49	579.30	503.86	517.93	411.15	352.75	387.30	352.11	150.30	250.55	285.44	268.59	707.86	741.35
49	E5a_E6a	KnownJunction	0	210.70	214.44	258.27	227.34	466.98	895.45	434.56	383.80	341.20	389.04	676.70	479.86	496.07	614.28	532.42	420.83	419.82	150.72	365.85	323.42	337.06	909.93	565.10
50	ER6a	ExonRegion	0	153.80	215.36	228.65	215.56	311.90	856.81	394.67	358.60	338.42	391.59	618.40	335.10	349.25	441.44	342.73	341.89	445.18	160.94	300.27	288.30	331.66	743.33	481.02
51	ER6b	ExonRegion	0	144.01	248.95	190.22	219.62	186.95	421.68	293.76	300.26	335.09	339.98	590.09	730.58	498.67	419.27	336.57	439.42	435.68	185.74	341.91	291.88	387.97	871.78	648.40
52	E6_Db	NovelBoundary	1	3.78	14.34	0.00	1.53	17.23	0.00	6.36	10.02	2.95	13.22	12.16	85.83	12.01	4.41	0.00	15.30	26.27	0.00	0.00	12.40	11.24	72.01	16.56
53	E6b_E7a	KnownJunction	1	259.53	308.76	158.66	221.28	178.01	371.43	259.63	256.51	284.86	299.40	361.41	677.47	421.89	594.21	429.69	556.26	267.88	183.72	490.74	270.50	219.12	1286.70	692.21
54	I6	Intron	0	7.28	6.39	3.25	3.97	6.27	2.42	9.97	6.72	5.98	5.59	8.60	27.22	21.53	6.51	5.21	9.64	12.58	2.93	5.10	11.57	10.74	74.32	27.01
55	I6_SR1	SilentIntronRegion	0	10.42	9.83	3.22	4.02	3.78	1.98	8.41	11.33	7.09	7.25	8.20	36.33	26.53	7.87	7.20	9.59	9.96	1.98	5.62	14.25	8.46	76.34	28.31
56	I6_AR2	ActiveIntronRegion	0	6.79	3.81	0.87	1.36	2.79	8.86	14.40	10.08	5.92	4.44	4.11	14.07	1.37	5.01	10.64	21.30	27.23	6.01	9.56	15.60	32.05	60.68	36.22
57	I6_AR3	ActiveIntronRegion	0	7.06	5.42	1.23	1.51	4.76	7.95	13.39	9.79	9.61	5.61	5.80	32.23	0.00	3.07	5.48	18.49	24.94	4.31	9.56	15.84	35.99	68.52	33.93
58	I6_AR4	ActiveIntronRegion	1	8.04	7.93	1.35	4.09	5.35	3.67	12.05	8.64	9.39	9.18	5.41	37.67	0.47	1.62	0.87	14.86	33.01	3.70	5.42	14.26	22.92	64.80	42.87
59	I6_AR5	ActiveIntronRegion	0	5.57	3.18	3.80	2.50	8.94	2.72	10.19	3.44	2.97	4.15	7.81	18.21	17.43	6.35	6.52	13.25	15.64	5.72	3.71	10.32	21.39	42.76	32.47
60	I6_AR6	ActiveIntronRegion	0	4.31	2.00	3.90	3.25	2.65	3.79	11.63	2.26	4.35	4.52	10.12	19.58	11.59	5.76	5.71	6.67	26.41	3.67	6.83	13.73	14.35	66.41	28.33
61	I6_SR4	SilentIntronRegion	0	6.46	6.39	2.79	4.85	7.91	1.92	10.53	5.65	6.48	5.02	8.65	25.66	21.77	6.29	2.92	8.99	8.78	1.81	3.71	9.19	7.18	83.32	22.81
62	I6_AR7	ActiveIntronRegion	0	13.10	8.27	7.86	6.23	13.02	1.63	16.54	4.72	5.13	7.98	20.57	31.72	46.37	7.76	7.20	15.06	20.32	10.53	11.81	13.51	21.81	138.07	41.61
63	ER7a	ExonRegion	0	198.60	345.39	226.47	262.98	256.71	429.96	345.38	343.80	314.33	364.04	512.68	874.65	613.35	556.26	406.01	522.63	451.23	222.81	418.60	280.72	438.30	1085.19	845.46
64	E7_Da	KnownBoundary	0	302.05	308.76	215.04	203.87	406.54	482.39	351.09	214.49	233.79	257.44	614.16	800.51	540.71	426.93	357.01	720.41	401.22	184.38	622.51	244.10	446.71	1287.50	1107.24
65	E7a_E8a	KnownJunction	0	62.46	150.04	133.97	131.42	145.76	135.60	135.54	86.63	90.31	123.48	161.83	167.90	170.61	257.58	150.81	137.31	243.85	82.33	69.37	67.56	127.57	139.18	145.03
66	ER7b	ExonRegion	0	239.65	271.67	150.27	187.16	338.43	333.74	300.20	220.31	208.44	228.34	374.64	446.87	282.64	229.32	212.66	194.49	221.65	53.81	161.35	149.41	162.35	706.48	360.49
67	ER7c	ExonRegion	0	10.58	6.10	1.23	4.09	0.00	18.34	2.65	1.73	3.71	1.15	3.87	12.99	0.00	3.25	5.80	0.00	9.90	1.85	0.00	0.00	0.00	10.42	2.94
68	I7	Intron	0	42.46	50.94	20.47	39.76	68.06	48.90	57.50	38.62	35.03	39.14	29.83	53.71	43.52	33.18	17.49	31.45	32.44	12.32	15.00	29.56	20.69	173.14	97.62
69	I7_AR1	ActiveIntronRegion	1	18.35	16.05	6.68	15.95	34.81	39.09	48.66	15.04	22.52	30.11	27.42	43.19	31.42	36.71	8.61	32.07	31.73	16.09	13.49	22.85	16.94	82.59	85.22
70	I7_SR1	SilentIntronRegion	1	10.58	12.03	8.99	17.72	47.05	25.52	72.05	13.68	16.47	14.24	34.95	95.97	80.12	34.78	2.90	7.68	44.56	3.70	12.74	13.12	20.20	89.59	110.61
71	I7_AR2	ActiveIntronRegion	0	23.74	43.47	20.39	36.50	57.58	47.59	57.17	37.60	37.21	42.21	28.12	57.81	47.43	34.26	15.35	33.20	30.66	13.04	16.61	34.50	24.91	190.47	107.54
72	I7_SR2	SilentIntronRegion	0	13.02	11.03	7.07	9.91	24.39	12.27	20.88	15.29	12.26	10.76	23.79	0.00	4.69	15.18	3.01	18.06	9.39	4.41	12.99	13.42	14.32	75.41	39.98
73	I7_AR5	ActiveIntronRegion	0	81.23	80.17	28.02	57.20	100.48	56.82	63.20	52.77	39.16	40.50	33.53	54.32	44.88	30.38	25.40	29.37	35.67	9.73	13.67	26.82	17.02	198.68	91.71
74	E8_Aa	NovelBoundary	1	154.47	95.97	65.02	103.08	152.80	111.30	86.43	109.83	57.61	86.74	52.38	48.92	99.34	51.15	32.02	67.16	60.21	30.68	27.11	41.48	35.21	208.81	163.98
75	ER8a	ExonRegion	0	207.92	209.83	151.15	221.97	230.74	192.93	194.60	198.17	153.74	190.41	229.33	298.62	209.81	306.65	235.28	232.78	289.73	142.85	103.72	156.58	188.87	336.09	306.17
76	E8a_E9a	KnownJunction	0	333.69	267.65	161.59	195.88	224.70	126.29	199.09	206.52	182.15	207.59	258.54	192.96	167.36	354.05	309.04	241.82	308.18	151.97	140.90	151.55	236.36	357.18	298.86
77	I8	Intron	0	21.63	17.05	11.38	11.45	32.61	13.70	19.54	15.70	10.37	11.12	7.88	15.77	16.91	5.43	5.43	8.58	11.34	1.60	3.21	6.43	5.65	54.23	34.58
78	I8_AR1	ActiveIntronRegion	0	20.08	18.70	11.15	13.96	34.58	15.71	20.51	17.63	11.67	13.21	7.82	17.78	21.09	6.08	4.33	8.41	10.68	1.62	2.49	7.78	4.52	58.68	36.71
79	E9_Aa	NovelBoundary	0	59.71	13.09	17.33	17.25	62.39	22.94	18.02	32.90	23.73	11.09	12.06	12.15	0.00	15.30	29.17	10.77	26.46	15.13	4.24	5.82	41.08	37.29	98.00
80	ER9a	ExonRegion	0	291.60	290.91	136.04	206.50	273.11	142.86	171.52	164.62	110.29	148.03	133.77	137.47	100.12	160.67	229.92	129.97	162.71	55.15	74.14	99.56	98.51	349.10	204.59
81	IG32	Intergenic	0	2.26	2.65	3.78	3.82	3.43	1.37	2.74	3.25	2.28	2.88	0.99	3.26	3.38	1.06	3.48	3.68	4.09	0.29	2.45	5.18	2.54	2.00	24.46
82	IG32_SR1	SilentIntergenicRegion	0	2.26	2.65	3.78	3.82	3.43	1.37	2.74	3.25	2.28	2.88	0.99	3.26	3.38	1.06	3.48	3.68	4.09	0.29	2.45	5.18	2.54	2.00	24.47