Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PHF10 Gene 0 134.45 268.08 122.08 223.19 233.93 208.57 228.79 156.16 189.74 234.61 102.89 153.62 121.77 106.33 72.63 65.69 86.24 54.10 100.73 79.71 32.94 155.05 66.32 2 339209 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 341591 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 445358 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 252308 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 480008 Transcript 0 68.13 199.31 84.00 159.97 156.74 137.98 150.42 105.73 127.15 151.77 48.21 82.90 66.58 48.23 37.56 28.41 34.65 25.62 53.45 45.29 11.87 88.88 28.89 7 366780 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 464779 Transcript 0 3.82 6.26 1.63 7.92 12.34 6.39 14.54 4.71 9.08 15.65 5.76 7.62 11.61 4.99 2.34 2.68 5.73 2.59 1.26 7.02 1.67 5.64 1.76 9 IG23_AR1 ActiveIntergenicRegion 0 2.45 13.80 16.36 6.75 6.95 19.61 8.42 6.33 7.71 16.54 5.59 1.55 0.00 7.83 8.04 3.86 6.20 8.76 16.11 9.53 2.87 2.11 3.39 10 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER1b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER1c ExonRegion 0 2.17 1.13 0.33 0.20 1.84 7.68 4.01 0.00 0.28 2.28 1.88 1.76 0.00 2.72 2.90 4.94 0.45 0.00 3.14 0.75 0.30 0.48 0.00 15 E1_Ad KnownBoundary 0 14.22 8.49 0.00 3.16 0.00 9.88 11.35 6.00 8.59 12.06 7.53 0.00 0.00 4.24 8.90 10.77 3.74 0.00 4.24 5.50 7.54 5.14 3.84 16 ER1d ExonRegion 0 26.90 34.50 16.39 13.14 21.84 21.58 23.35 17.77 28.64 44.21 34.99 3.78 20.29 49.93 26.21 25.09 18.96 7.63 32.26 28.25 20.55 24.47 23.46 17 E1a_E2a KnownJunction 1 74.68 51.11 42.58 47.65 50.00 62.18 69.60 45.96 104.37 91.04 88.50 6.30 31.65 82.47 41.91 40.42 68.82 34.95 76.80 83.67 37.56 41.21 49.17 18 ER2a ExonRegion 0 115.08 86.40 59.78 50.54 106.85 105.83 146.49 75.08 136.38 132.13 164.68 178.16 76.40 122.54 77.52 76.55 134.50 79.06 101.40 104.87 57.21 132.41 75.91 19 E2a_E3b KnownJunction 1 159.81 103.86 115.81 101.99 168.76 122.54 207.96 121.29 248.98 227.82 161.78 180.96 55.68 145.57 95.80 67.25 149.79 124.48 90.92 99.46 64.43 119.28 132.31 20 ER3a ExonRegion 0 6.28 9.16 2.15 10.84 14.31 6.01 18.08 7.81 14.14 27.15 6.99 10.59 15.46 7.57 2.09 2.78 10.21 5.16 2.52 8.39 0.47 9.32 3.48 21 E3_Ab KnownBoundary 0 13.78 2.96 1.45 21.94 16.81 7.04 31.00 10.10 9.03 29.04 0.00 20.26 22.89 2.35 0.00 8.20 0.00 4.31 4.24 3.20 0.00 2.76 0.00 22 ER3b ExonRegion 0 164.06 89.09 103.43 153.74 143.03 131.37 162.93 118.77 245.49 263.52 222.85 246.78 167.36 211.51 119.42 123.37 219.64 77.05 163.70 143.11 54.72 240.39 105.79 23 E3a_E4a KnownJunction 1 184.77 163.79 150.56 227.28 150.17 153.55 231.46 130.33 278.82 294.60 136.88 416.39 256.48 234.80 198.28 92.63 175.22 73.00 136.38 107.38 28.17 204.03 91.85 24 E3a_E4b KnownJunction 0 42.60 27.36 16.85 43.48 34.21 24.08 35.73 28.46 47.74 38.20 48.49 67.37 46.59 43.50 26.21 31.62 58.34 10.74 30.12 19.43 9.02 53.70 33.89 25 E4_Ab NovelBoundary 0 61.64 48.87 35.66 69.95 55.60 75.75 106.87 38.32 62.99 94.26 57.07 97.53 92.36 60.22 41.41 29.82 75.55 25.66 54.59 39.50 24.46 75.99 36.28 26 ER4a ExonRegion 0 142.11 104.87 114.83 168.02 139.52 151.68 176.84 116.05 201.85 258.71 143.59 382.23 222.44 226.68 173.66 93.83 178.25 57.28 123.77 77.81 41.24 202.40 101.94 27 ER4b ExonRegion 0 150.99 158.14 113.29 202.01 292.25 199.38 285.96 143.01 242.52 300.28 261.90 391.51 221.53 202.51 118.05 115.57 250.74 63.69 98.13 129.54 59.93 232.87 144.85 28 E4_Da KnownBoundary 0 0.00 5.13 0.00 6.56 4.33 0.00 6.27 5.05 5.53 4.51 4.84 23.56 25.97 0.00 0.00 4.27 4.77 0.00 0.00 9.65 0.00 3.12 0.00 29 E4a_E5a KnownJunction 1 138.39 218.78 122.97 212.29 329.88 218.23 397.02 142.98 264.93 313.75 260.28 368.37 283.91 203.31 90.49 88.87 308.27 54.68 79.72 171.68 78.52 280.33 149.21 30 ER4c ExonRegion 0 1.36 3.36 1.10 5.00 10.37 6.77 11.00 1.62 4.03 4.16 4.53 4.65 7.76 2.41 2.58 2.57 1.26 0.02 0.00 5.65 2.86 1.95 0.04 31 ER5a ExonRegion 0 176.89 170.17 127.27 211.24 206.03 232.88 293.07 189.67 267.61 321.83 216.28 407.58 319.34 222.40 130.49 122.26 230.27 66.00 128.20 120.40 45.64 285.18 115.25 32 E5a_E6a KnownJunction 0 290.94 202.60 205.58 301.96 251.36 208.80 369.86 236.79 357.78 406.77 237.32 467.70 328.39 206.61 127.45 158.08 298.36 88.17 247.16 201.53 46.95 259.63 165.52 33 ER6a ExonRegion 0 252.98 181.56 128.28 223.89 258.25 238.85 281.64 225.09 280.98 366.93 260.58 428.53 323.86 227.44 121.00 161.39 232.93 140.65 202.40 149.36 81.96 296.47 175.98 34 E6_Da NovelBoundary 0 113.50 58.15 19.78 43.32 102.97 95.23 100.78 58.33 58.85 35.14 47.12 31.66 41.88 32.14 16.19 37.00 42.08 21.27 12.71 23.97 9.39 80.58 14.85 35 E6a_E7a KnownJunction 0 397.63 317.05 165.61 219.32 271.14 222.71 324.46 182.98 262.29 345.98 303.55 448.50 358.58 237.57 144.76 168.08 238.34 141.44 356.43 214.19 93.53 246.22 160.82 36 E6a_E8a KnownJunction 0 0.00 2.76 0.00 2.86 0.00 0.00 4.15 2.14 11.49 3.33 0.00 6.30 0.00 2.12 0.00 0.00 0.00 1.95 0.00 0.00 0.00 2.69 0.00 37 I6 Intron 0 18.78 26.23 8.65 18.75 30.40 28.21 36.66 10.36 18.08 13.15 18.30 22.33 19.67 17.97 10.02 19.34 22.25 9.79 14.32 14.35 7.82 29.34 18.76 38 I6_AR1 ActiveIntronRegion 0 22.90 21.21 1.93 2.63 20.45 27.44 33.34 1.42 1.24 2.09 11.53 19.64 9.55 8.41 10.57 26.32 18.86 7.92 16.15 6.08 6.06 34.15 19.19 39 I6_SR1 SilentIntronRegion 0 20.45 27.65 9.36 19.54 33.52 30.13 40.28 10.52 19.35 15.02 18.78 24.30 19.62 18.21 9.30 20.07 21.32 10.75 13.34 14.93 7.80 30.53 20.48 40 I6_AR2 ActiveIntronRegion 0 9.46 22.13 8.16 22.07 20.03 19.90 21.36 13.55 19.29 8.91 19.24 14.33 24.69 21.26 13.61 13.42 28.79 6.17 18.78 15.33 8.88 22.37 10.75 41 E7_Aa NovelBoundary 0 0.00 45.85 8.49 44.68 31.24 57.47 51.80 23.54 28.65 33.44 11.69 43.36 6.82 38.02 0.00 30.59 29.17 8.95 16.28 31.13 7.97 16.59 23.56 42 ER7a ExonRegion 0 267.05 206.69 97.88 156.74 209.73 224.99 224.88 167.86 206.25 292.07 218.08 287.56 244.39 273.89 125.99 159.98 206.13 172.70 209.13 123.66 126.41 223.03 156.10 43 E7_Da NovelBoundary 0 10.74 36.38 7.98 38.46 18.08 40.83 37.05 14.79 49.71 15.88 27.90 33.16 13.15 9.83 37.46 8.46 35.44 14.59 18.82 26.27 6.30 53.58 32.61 44 E7a_E8a KnownJunction 0 201.67 145.43 105.02 110.88 267.83 250.42 210.74 140.43 189.90 239.13 188.05 256.88 152.59 224.26 81.09 163.21 175.60 149.40 182.03 103.23 136.47 183.33 219.30 45 I7 Intron 0 16.87 26.81 7.20 26.26 23.48 28.06 29.64 15.40 24.74 15.58 16.80 15.26 17.15 17.99 9.54 15.75 19.17 12.83 12.02 12.81 7.66 20.05 12.70 46 I7_AR1 ActiveIntronRegion 1 22.67 34.29 8.23 37.96 24.76 24.16 36.00 18.29 44.32 13.80 20.81 27.43 10.39 18.65 10.34 23.99 24.46 17.83 12.24 21.25 8.53 30.74 13.68 47 I7_SR1 SilentIntronRegion 0 15.70 25.32 7.00 23.88 23.28 28.96 28.39 14.84 20.70 16.00 16.01 12.75 18.61 17.91 9.41 14.07 18.12 11.81 12.01 11.08 7.50 17.87 12.53 48 E8_Aa NovelBoundary 0 34.08 70.25 26.40 70.09 27.67 71.89 56.97 36.72 39.73 35.16 23.48 24.91 28.08 39.14 20.15 28.20 40.39 32.83 53.93 21.73 20.63 54.50 36.19 49 ER8a ExonRegion 0 286.73 181.66 103.43 153.03 259.81 245.47 262.94 137.10 192.81 230.77 222.25 209.59 171.73 303.93 147.25 232.56 203.24 205.57 240.97 121.35 141.28 238.45 210.75 50 E8a_E9a KnownJunction 0 374.73 244.76 125.10 192.65 287.86 242.59 279.37 167.58 226.68 251.11 257.01 193.56 156.00 413.74 146.61 291.03 230.95 245.07 383.73 197.12 188.17 399.12 281.44 51 ER9a ExonRegion 0 243.64 213.32 91.22 142.31 256.07 302.35 338.85 133.04 189.76 218.95 189.55 165.30 125.52 263.29 132.77 164.67 235.19 153.41 224.87 123.87 131.91 230.83 178.14 52 E9_Da KnownBoundary 1 95.50 236.21 56.47 118.00 387.44 382.22 343.50 121.29 190.10 215.59 143.19 115.69 144.96 167.70 29.30 199.52 193.74 129.42 230.31 146.11 86.06 171.88 126.42 53 E9a_E10a KnownJunction 0 207.15 11.91 39.95 30.17 99.66 43.21 76.58 37.58 25.14 43.36 51.59 81.93 34.25 140.50 119.29 42.64 63.02 0.00 52.33 0.00 33.24 98.16 57.28 54 E9_Db KnownBoundary 1 53.86 219.76 48.34 61.13 221.73 248.55 167.24 111.76 156.10 164.31 124.03 101.58 191.22 190.01 62.43 190.72 166.06 117.27 233.04 92.17 90.19 226.38 147.00 55 ER9b ExonRegion 1 76.30 244.61 70.95 123.44 305.67 339.51 267.57 157.37 243.02 259.53 173.32 118.34 167.50 211.06 57.75 232.11 220.85 137.44 262.11 142.65 104.62 247.94 166.83 56 ER9c ExonRegion 0 136.27 395.85 167.99 317.07 313.47 275.96 296.69 209.32 242.82 300.21 96.43 159.50 133.16 94.34 75.11 56.83 69.30 49.29 106.91 90.58 23.73 175.07 57.78 57 I9 Intron 0 26.14 10.29 4.91 18.15 31.31 23.05 16.12 14.25 14.99 19.61 17.12 23.17 26.33 13.83 10.62 8.46 10.97 3.05 5.54 2.86 2.44 16.64 6.97 58 I9_AR1 ActiveIntronRegion 0 26.22 10.32 4.92 18.20 31.39 23.13 16.17 14.30 15.04 19.67 17.17 23.24 26.41 13.87 10.65 8.49 11.00 3.06 5.56 2.87 2.44 16.69 6.99 59 E10_Aa NovelBoundary 0 239.60 121.56 66.38 97.82 216.13 79.10 113.32 55.29 52.40 120.77 35.01 89.58 73.37 36.55 78.50 48.11 71.90 4.68 17.41 23.84 41.70 63.74 30.30 60 ER10a ExonRegion 0 138.10 9.38 40.88 47.75 83.14 37.85 44.43 43.08 25.17 40.94 45.04 65.74 26.55 78.75 72.61 45.24 41.58 3.44 43.48 1.68 16.05 76.08 39.15 61 E10_Da NovelBoundary 0 203.59 71.63 38.53 123.26 100.00 75.18 88.50 72.70 48.81 108.28 70.39 116.59 101.45 51.74 62.55 27.77 41.89 1.99 22.78 30.81 44.11 175.86 18.69 62 E10a_E11a KnownJunction 0 239.60 6.38 62.00 69.26 105.43 38.78 49.24 60.13 35.85 60.20 86.65 139.85 83.92 135.26 190.37 54.52 86.40 2.32 49.32 5.31 14.52 124.79 57.96 63 E11_Aa NovelBoundary 0 174.62 45.65 80.42 119.17 175.30 65.59 64.48 86.75 57.20 115.10 63.65 122.89 68.02 49.91 61.44 67.16 42.82 10.24 48.00 16.81 22.73 136.12 43.28 64 ER11a ExonRegion 0 150.08 5.08 29.39 45.85 58.82 26.71 29.76 29.93 22.96 40.57 38.14 51.06 19.33 50.06 53.34 22.06 36.22 0.99 19.50 4.11 9.21 56.26 33.84 65 E11_Da NovelBoundary 0 298.20 111.69 54.05 82.07 373.26 205.34 227.92 75.41 50.95 100.95 96.81 146.90 182.29 121.61 153.66 127.49 147.36 15.79 124.52 27.04 109.41 158.84 93.05 66 E11a_E12a KnownJunction 1 703.09 26.57 33.85 69.72 178.44 48.44 64.96 30.44 29.72 45.75 51.33 138.35 40.09 87.88 65.64 59.39 49.56 0.00 46.02 12.59 27.12 102.08 76.31 67 E12_Aa NovelBoundary 1 175.22 134.12 61.56 52.87 154.33 89.04 95.79 49.33 35.62 118.41 76.49 337.16 224.50 126.44 181.10 134.15 58.25 10.74 32.19 17.90 99.71 149.41 92.19 68 ER12a ExonRegion 0 114.20 6.22 10.64 15.75 19.78 6.60 7.18 6.62 8.22 9.69 8.42 14.71 3.06 13.49 12.55 8.75 11.87 0.00 4.63 1.29 6.48 15.42 14.76 69 ER12b ExonRegion 0 4.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.54 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94