Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C6orf35 Gene 0 42.04 59.79 56.02 46.90 50.89 67.19 63.47 55.75 65.99 52.51 48.14 42.32 41.00 60.46 69.14 62.56 39.43 18.85 36.58 42.25 35.26 63.06 42.34 2 367144 Transcript 0 10.76 7.35 8.81 3.77 7.51 3.11 13.61 13.36 9.52 7.22 6.87 9.44 9.43 10.89 9.50 9.30 10.62 0.51 3.41 5.12 2.07 4.97 5.23 3 400788 Transcript 0 54.69 113.16 108.25 80.63 106.94 191.61 166.25 90.89 105.92 85.95 93.00 45.20 76.08 116.58 135.02 102.54 67.21 33.50 66.45 73.64 59.49 103.61 62.88 4 ER1a ExonRegion 0 66.40 70.01 22.24 21.66 43.46 100.16 77.37 26.93 38.67 18.36 41.46 8.00 4.32 59.26 78.79 109.95 34.83 29.26 38.16 45.85 39.95 68.34 85.61 5 E1a_E2a KnownJunction 1 42.23 39.20 35.48 17.85 15.70 28.96 45.97 24.64 46.85 20.36 55.12 67.67 49.67 27.14 74.79 56.65 30.39 18.53 39.34 28.25 57.02 17.45 39.86 6 ER2a ExonRegion 1 23.16 28.25 55.47 46.78 22.41 30.81 26.36 72.24 81.59 52.56 137.25 30.43 26.42 136.67 155.43 142.19 105.69 36.20 71.21 88.06 112.15 112.90 111.33 7 E2a_E3a KnownJunction 1 87.72 57.49 88.73 69.29 44.65 54.80 73.40 92.95 111.43 65.33 97.29 58.07 18.51 274.41 399.65 412.71 98.18 87.76 160.57 114.67 86.55 329.31 299.54 8 ER3a ExonRegion 0 39.12 58.33 92.70 64.68 102.40 162.08 122.10 82.70 93.53 78.69 97.33 52.02 59.17 135.79 164.87 164.03 90.10 69.56 68.05 91.43 71.59 114.23 122.23 9 E3_Da KnownBoundary 0 17.71 30.78 8.75 1.63 12.90 5.62 39.88 4.07 2.89 8.22 9.32 0.00 6.82 9.42 13.60 12.82 17.95 1.87 19.20 15.72 3.15 6.25 4.35 10 E3a_E4a KnownJunction 1 57.27 145.76 141.69 96.42 148.73 303.40 255.39 110.04 124.77 100.28 132.93 31.06 94.96 167.11 195.81 145.18 93.50 49.08 89.79 99.90 81.24 131.90 88.61 11 ER3b ExonRegion 0 10.76 7.35 8.81 3.77 7.51 3.11 13.61 13.36 9.52 7.22 6.87 9.44 9.43 10.89 9.50 9.30 10.62 0.51 3.41 5.12 2.07 4.97 5.23 12 I3_AR4 ActiveIntronRegion 0 10.70 7.00 4.90 9.31 6.24 0.31 7.50 8.64 7.20 0.83 3.33 6.49 9.38 0.00 3.71 1.82 0.00 0.00 3.19 1.77 0.49 0.69 0.00 13 E4_Aa NovelBoundary 0 20.74 0.00 17.03 4.93 0.00 19.59 2.16 1.68 5.76 4.46 2.26 0.00 0.00 2.47 0.00 3.76 0.00 0.00 4.80 2.75 0.00 0.00 0.00 14 ER4a ExonRegion 0 52.11 80.56 74.81 64.84 65.15 79.82 77.11 71.75 87.08 71.63 53.06 59.33 57.20 66.05 74.22 59.91 40.91 17.92 43.10 47.39 37.75 75.33 37.16 15 IG45_AR15 ActiveIntergenicRegion 0 8.47 28.58 12.01 22.29 18.68 26.54 21.87 21.32 36.98 15.38 4.50 6.97 8.21 4.74 7.76 7.84 3.25 6.21 9.32 17.43 7.58 9.85 10.74 16 IG45_SR9 SilentIntergenicRegion 0 9.04 15.47 12.52 20.66 19.87 16.95 14.04 23.71 26.77 13.05 0.49 2.82 7.24 2.85 4.07 3.51 2.10 6.57 14.15 10.56 5.19 9.86 7.89 17 IG45_AR14 ActiveIntergenicRegion 0 8.47 14.24 12.25 13.40 13.38 21.39 26.70 17.28 14.82 11.85 1.93 0.00 0.00 1.62 3.38 2.97 6.60 3.70 19.11 8.51 4.41 6.25 7.83 18 IG45_AR13 ActiveIntergenicRegion 0 3.93 16.27 10.74 12.53 17.97 34.06 26.10 17.04 14.35 10.05 1.93 3.92 0.00 1.78 2.90 5.80 2.04 6.86 18.35 7.60 7.35 4.66 5.87 19 IG45_AR12 ActiveIntergenicRegion 0 3.10 10.23 11.05 10.62 15.26 29.01 15.47 10.71 14.10 8.68 0.12 1.42 0.00 1.24 2.77 3.15 0.59 7.09 7.61 13.97 5.72 1.77 6.44 20 IG45_AR11 ActiveIntergenicRegion 0 8.62 10.02 14.09 12.61 16.91 8.84 6.95 12.47 20.20 6.23 0.00 0.46 0.00 1.62 1.76 1.59 6.60 9.11 3.87 8.28 5.35 1.71 13.84 21 IG45_AR10 ActiveIntergenicRegion 0 5.89 9.50 4.37 10.11 10.77 11.76 5.11 13.07 14.06 5.48 0.85 0.76 1.94 1.51 2.13 1.11 0.64 2.67 5.48 3.92 2.48 5.53 3.65 22 IG45_AR9 ActiveIntergenicRegion 0 0.52 8.54 1.08 5.27 13.62 19.90 3.02 15.92 8.41 8.64 0.47 0.87 0.00 0.85 0.00 2.19 0.00 3.44 2.97 3.79 0.00 1.89 0.72 23 IG45_AR7 ActiveIntergenicRegion 0 1.64 5.24 0.97 8.27 13.21 20.89 1.21 22.61 3.65 11.75 0.00 1.75 0.00 0.00 1.46 0.73 0.99 5.75 5.53 2.63 0.27 2.44 1.92 24 IG45_SR5 SilentIntergenicRegion 0 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.78 2.29 0.00 0.00 0.00 18.95 0.00 5.28 3.30 0.00 0.00 0.00 0.00 0.00 0.00 25 IG45_AR5 ActiveIntergenicRegion 0 0.72 0.00 1.05 0.00 0.77 0.00 0.05 2.44 1.70 0.76 0.00 0.00 0.00 17.82 0.00 1.43 1.59 0.00 0.00 0.00 0.00 0.60 0.00 26 IG45_AR4 ActiveIntergenicRegion 0 2.31 2.09 1.27 0.83 1.68 0.00 0.09 0.78 1.13 2.71 0.03 0.00 0.00 26.81 0.00 0.00 0.00 0.00 0.00 0.78 0.00 0.00 1.07 27 IG45_SR3 SilentIntergenicRegion 0 0.37 0.46 1.31 0.86 3.39 0.84 1.14 1.11 2.03 2.91 0.11 0.00 0.56 13.38 0.12 0.43 0.09 0.24 0.82 0.73 0.13 0.78 0.25 28 IG45_AR3 ActiveIntergenicRegion 0 1.17 0.50 1.96 0.78 3.21 0.56 0.77 1.82 2.77 2.94 0.00 0.00 0.47 13.23 0.00 0.27 1.12 0.25 0.39 0.33 0.07 1.65 0.54 29 IG45_AR2 ActiveIntergenicRegion 0 11.58 29.47 6.54 15.21 18.41 7.43 14.28 8.47 9.59 16.09 1.40 1.76 4.79 0.65 4.42 3.58 2.82 3.58 10.88 9.88 0.00 1.26 5.76 30 IG45_SR1 SilentIntergenicRegion 0 10.70 36.24 4.92 19.18 18.86 10.69 20.90 12.97 8.09 19.16 1.20 1.44 6.11 0.35 3.51 3.57 5.13 1.67 9.48 11.42 0.00 0.63 1.96 31 IG45_AR1 ActiveIntergenicRegion 0 87.92 182.25 85.07 137.30 140.27 117.71 113.07 126.61 71.41 109.40 20.50 31.42 61.16 21.81 29.88 29.84 18.85 15.87 47.43 78.26 6.92 43.98 26.10