Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BX276089.2 Gene 0 29.26 96.59 23.81 56.51 61.46 86.94 92.46 43.20 78.94 91.40 71.91 156.07 150.02 88.42 33.65 86.12 93.59 57.20 50.38 142.12 56.56 98.52 78.71 2 253339 Transcript 0 12.56 95.59 11.32 36.03 36.58 40.51 59.11 32.60 54.03 62.53 52.58 109.53 109.88 75.11 25.87 58.63 56.01 39.47 35.25 86.73 27.14 83.33 73.50 3 441107 Transcript 0 2.45 2.69 1.10 3.42 2.35 18.15 17.90 0.64 2.38 4.37 0.94 3.66 1.88 1.92 2.92 3.73 3.71 0.88 0.30 8.69 1.56 3.36 5.18 4 ER1a ExonRegion 0 0.67 5.60 1.12 1.37 1.31 5.02 5.24 2.90 3.43 7.60 4.00 0.10 1.08 12.70 3.47 10.02 4.24 7.65 4.81 9.76 2.90 6.98 8.82 5 E1a_E3a KnownJunction 1 3.78 23.75 8.01 11.79 7.56 0.00 2.25 28.59 30.79 45.26 26.22 11.55 26.13 108.48 39.68 95.79 17.48 58.91 44.80 74.46 14.09 55.36 142.13 6 ER2a ExonRegion 1 6.41 2.37 2.55 6.15 4.36 5.55 4.01 3.00 6.00 5.18 3.60 5.99 3.60 2.09 10.45 4.86 7.69 3.00 1.48 5.95 1.03 0.49 7.17 7 E2_Da NovelBoundary 0 6.45 0.00 13.51 10.39 16.38 2.90 10.42 5.87 8.74 4.06 2.53 18.46 0.00 2.47 15.20 12.99 9.44 4.23 9.51 9.27 2.53 0.00 11.27 8 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.35 9 ER3a ExonRegion 0 27.44 83.32 30.41 44.02 45.53 66.72 86.94 50.68 73.94 79.12 117.43 204.05 178.91 95.15 29.48 95.22 123.87 60.67 51.35 166.19 67.24 109.90 93.40 10 E3_Da NovelBoundary 0 7.56 9.67 20.64 11.09 22.24 11.41 31.27 13.06 8.13 4.81 2.58 6.30 6.82 8.24 5.19 3.50 0.00 4.64 16.75 5.69 3.15 0.00 0.00 11 E3a_E4a KnownJunction 0 3.56 5.46 0.00 1.96 0.00 6.98 9.98 0.00 1.79 5.48 0.00 0.00 0.00 2.12 0.00 0.00 4.11 0.00 0.00 14.32 5.93 5.33 4.35 12 E3a_E5a KnownJunction 0 7.19 123.53 14.10 43.28 26.57 40.83 111.11 34.87 86.34 68.82 141.61 242.33 210.21 108.54 28.43 85.96 165.40 75.78 57.70 159.47 78.40 132.51 96.46 13 E3a_E6a NovelJunction 0 0.00 6.05 0.00 1.63 0.00 2.90 2.16 4.23 7.49 3.89 5.37 12.60 12.99 9.18 0.00 7.78 0.00 1.82 16.28 21.73 0.00 0.00 0.00 14 I3_SR1 SilentIntronRegion 0 13.30 8.19 4.11 6.10 6.69 3.30 16.94 3.53 3.05 2.60 3.37 5.56 11.79 0.92 4.51 3.70 2.27 0.00 1.08 18.57 0.00 2.51 3.49 15 E4_Aa NovelBoundary 0 15.04 6.71 3.61 15.02 24.45 23.17 29.63 8.30 5.58 1.64 0.00 6.30 13.31 0.00 5.19 8.72 13.37 1.62 41.32 2.56 0.00 2.39 8.71 16 ER4a ExonRegion 0 2.27 2.93 2.94 7.02 7.38 24.03 30.53 0.18 2.64 6.04 1.12 6.02 5.83 2.91 4.15 5.76 6.74 1.42 0.00 14.24 0.86 5.15 6.86 17 E4_Da NovelBoundary 0 3.48 7.89 6.92 19.11 3.57 0.00 22.57 7.06 1.39 1.45 6.63 0.00 21.75 2.12 0.00 7.86 9.26 2.57 15.53 2.36 5.62 3.00 3.84 18 E4a_E5a KnownJunction 0 0.00 2.70 0.00 1.96 0.00 54.17 44.96 0.00 1.48 5.13 0.00 6.30 0.00 2.47 0.00 8.03 0.00 0.00 0.00 8.95 0.00 5.82 3.16 19 E5_Aa NovelBoundary 0 19.34 8.55 7.21 6.83 11.88 15.16 12.32 0.00 1.50 6.12 4.79 5.25 0.00 5.00 5.44 13.07 8.23 0.00 6.96 5.24 2.66 6.18 4.35 20 ER5a ExonRegion 0 35.12 79.90 21.27 47.81 51.44 84.73 100.26 39.00 97.98 101.93 140.32 306.02 315.88 124.51 40.17 150.84 186.95 125.11 76.30 207.04 94.66 145.49 130.11 21 E5a_E6a KnownJunction 0 41.93 91.69 35.24 63.66 32.00 69.28 82.23 41.40 136.37 113.09 155.88 271.74 356.63 194.36 78.13 325.04 201.87 216.55 193.89 274.72 125.04 225.09 244.05 22 I5_AR2 ActiveIntronRegion 0 8.20 4.07 0.00 2.73 13.38 3.44 19.86 3.46 2.47 2.29 1.93 4.33 4.69 3.25 0.00 0.00 0.83 0.00 3.19 2.93 0.00 4.17 2.94 23 E6_Aa NovelBoundary 0 13.63 6.51 5.03 12.99 7.98 2.16 2.08 1.97 3.07 0.00 9.16 25.06 12.01 0.00 22.25 21.87 3.55 0.00 12.80 5.11 0.00 2.51 6.74 24 ER6a ExonRegion 0 34.69 66.33 34.72 55.24 51.16 94.04 91.08 47.18 93.63 105.65 116.42 172.80 182.12 132.96 48.97 136.13 151.52 105.71 79.22 200.19 107.17 112.26 119.05 25 E6_Da NovelBoundary 0 7.56 9.67 17.89 20.38 0.00 0.00 13.07 14.46 15.60 9.78 26.80 44.11 28.24 0.00 0.00 3.25 4.77 0.00 4.80 7.99 3.15 34.66 10.84 26 E6a_E7a KnownJunction 0 31.78 114.39 15.35 48.84 49.58 91.42 123.52 39.60 56.60 57.73 51.22 144.35 173.04 71.87 36.59 58.62 69.38 29.89 25.04 133.27 22.98 64.05 44.73 27 I6_AR3 ActiveIntronRegion 0 6.04 17.41 6.51 13.03 9.07 10.14 20.78 6.90 8.87 9.14 1.72 8.90 5.67 2.08 2.71 8.49 9.42 3.13 5.70 12.90 0.79 7.43 3.67 28 E7_Aa NovelBoundary 0 6.89 52.49 11.15 8.99 3.48 0.00 78.83 6.08 19.79 4.75 2.68 0.00 40.42 0.00 0.00 3.50 8.23 0.00 9.60 10.80 0.00 3.00 3.59 29 ER7a ExonRegion 0 27.36 93.24 21.12 65.31 73.08 98.14 126.29 43.87 75.21 79.17 50.36 179.26 131.10 75.57 30.65 72.80 88.21 38.49 45.58 140.38 37.71 98.09 73.48 30 E7_Da NovelBoundary 0 10.74 10.00 6.80 16.78 20.80 20.16 54.41 4.52 22.11 9.40 0.00 0.00 26.13 7.00 9.39 0.00 0.00 0.00 4.80 11.89 2.90 8.39 4.27 31 E7a_E8a KnownJunction 1 14.52 76.17 21.61 58.80 38.79 60.31 98.26 34.26 51.13 65.14 34.32 42.46 55.68 92.77 8.90 67.16 65.17 65.50 43.11 143.24 62.02 61.23 50.28 32 I7 Intron 0 11.05 14.15 7.19 13.94 17.02 6.04 16.18 6.49 12.05 11.03 2.39 15.71 19.65 3.83 9.74 8.16 7.10 0.88 2.62 11.40 1.61 2.96 6.05 33 I7_AR1 ActiveIntronRegion 0 10.97 12.29 5.05 14.27 24.69 5.92 17.44 6.47 9.71 7.73 4.37 20.84 23.20 2.92 12.98 4.22 14.62 1.16 4.86 8.95 2.68 4.33 5.96 34 I7_SR1 SilentIntronRegion 0 11.09 14.60 7.68 13.90 15.35 6.09 15.94 6.50 12.60 11.79 1.95 14.60 18.89 4.04 9.04 9.06 5.44 0.82 2.13 11.97 1.38 2.66 6.08 35 E8_Aa NovelBoundary 0 13.56 28.74 14.19 13.78 33.45 11.24 33.08 5.91 39.44 34.28 4.69 5.40 15.10 4.77 18.91 11.88 4.30 5.14 21.65 12.53 5.68 2.39 12.12 36 ER8a ExonRegion 0 31.93 99.38 30.97 73.74 53.73 110.76 102.10 32.69 82.80 106.05 53.64 98.44 60.53 102.36 39.48 120.87 86.22 79.75 67.75 171.90 78.96 76.30 93.92 37 E8_Da NovelBoundary 0 14.37 39.53 10.08 16.18 14.94 0.00 16.21 9.04 12.27 8.76 0.00 0.00 0.00 0.00 6.30 4.36 4.11 2.28 4.80 5.88 0.00 0.00 20.15 38 E8a_E9a KnownJunction 0 56.16 84.46 35.45 73.02 84.38 201.08 106.30 50.40 88.14 98.23 64.12 104.28 26.30 116.31 33.13 117.32 80.22 92.03 94.50 213.68 60.11 95.34 81.01 39 I8 Intron 0 9.76 23.72 1.98 8.82 2.18 0.99 4.67 1.40 3.00 6.95 0.00 5.39 3.14 1.04 3.33 1.61 0.90 0.50 0.00 5.77 0.00 2.83 3.19 40 I8_SR1 SilentIntronRegion 0 9.87 23.98 2.00 8.91 2.20 1.01 4.72 1.41 3.03 7.02 0.00 5.45 3.18 1.05 3.37 1.63 0.91 0.51 0.00 5.83 0.00 2.86 3.22 41 E9_Aa NovelBoundary 0 52.23 74.46 0.00 12.55 0.00 5.68 20.09 5.01 5.76 5.56 0.00 0.00 6.82 3.00 8.90 0.00 0.00 0.00 0.00 3.26 0.00 3.06 4.27 42 ER9a ExonRegion 0 51.17 104.59 30.38 81.21 72.15 115.70 100.97 46.43 80.32 106.59 61.00 107.47 70.09 93.46 38.56 134.05 82.46 70.04 76.24 173.99 63.35 83.13 113.21 43 E9_Da NovelBoundary 0 21.11 93.01 29.98 45.85 15.20 14.03 56.84 10.72 41.38 35.35 0.00 16.81 14.45 4.59 8.90 36.83 8.60 15.34 0.00 59.25 0.00 14.02 4.27 44 E9a_E10a KnownJunction 0 17.63 73.08 13.48 43.65 41.26 104.77 69.07 17.54 52.69 76.56 56.01 82.38 53.24 71.69 22.13 75.02 64.70 55.26 49.41 112.81 48.00 71.64 89.20 45 I9 Intron 0 19.02 21.59 10.34 27.63 32.03 18.91 31.95 14.19 19.71 21.25 3.75 10.31 17.87 6.50 12.03 21.68 13.41 11.03 15.19 26.26 3.46 6.80 13.20 46 I9_SR1 SilentIntronRegion 0 19.10 21.68 10.39 27.74 32.16 18.99 32.07 14.25 19.80 21.33 3.76 10.34 17.94 6.52 12.07 21.77 13.46 11.08 15.26 26.37 3.47 6.82 13.25 47 E10_Aa NovelBoundary 0 51.49 27.69 12.48 49.51 52.29 50.60 88.94 20.58 26.62 60.68 14.00 12.60 49.67 12.36 14.83 23.67 17.11 9.24 8.75 64.75 5.25 10.72 23.82 48 ER10a ExonRegion 0 32.89 130.00 19.17 79.13 101.80 123.44 133.51 52.78 115.35 124.46 58.78 193.22 176.82 88.64 32.96 80.48 88.41 39.04 43.03 159.20 41.75 115.32 72.91 49 E10_Da KnownBoundary 1 47.71 260.55 40.92 129.55 96.69 95.17 182.70 75.41 139.52 181.43 67.75 363.87 304.36 75.76 29.54 55.28 74.80 24.08 34.64 203.77 47.20 153.94 58.99 50 ER10b ExonRegion 1 38.60 229.47 22.03 87.68 110.90 116.20 117.82 64.02 95.57 128.44 38.50 184.12 202.10 70.70 31.88 42.74 36.92 15.56 33.70 103.21 13.19 138.46 46.57 51 IG22 Intergenic 0 27.90 101.38 21.97 76.03 118.57 111.04 127.73 31.49 61.88 87.17 32.87 119.18 124.58 44.85 26.50 40.88 23.96 7.57 22.51 89.01 10.94 73.23 20.75 52 IG22_AR1 ActiveIntergenicRegion 0 28.10 102.13 22.14 76.60 119.47 111.88 128.67 31.73 62.34 87.82 33.11 120.05 125.52 45.19 26.70 41.18 24.14 7.63 22.68 89.67 11.03 73.77 20.90