Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TNFAIP3 Gene 0 173.90 4.62 49.85 27.96 138.99 56.14 63.48 145.14 216.01 35.21 1392.98 392.70 263.82 540.66 243.99 604.68 919.03 0.03 0.49 0.65 124.53 1341.65 1123.07 2 421450 Transcript 0 3.43 0.00 1.06 0.68 1.99 4.03 1.90 2.93 8.12 2.44 85.54 1.95 1.05 27.51 7.44 26.23 55.41 0.00 0.00 0.00 13.42 57.76 63.18 3 420009 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 237289 Transcript 0 98.68 3.82 50.92 26.77 110.16 48.31 50.91 150.27 245.02 38.50 1572.81 456.14 325.02 603.31 221.94 742.95 1070.70 0.00 1.62 0.29 135.02 1544.47 1421.85 5 433680 Transcript 0 0.00 0.00 1.48 0.00 0.41 0.95 1.08 1.66 2.77 0.00 14.43 0.08 1.35 7.46 3.81 6.41 15.82 0.00 0.00 0.00 5.38 14.48 20.77 6 485192 Transcript 0 56.21 0.69 5.24 8.55 37.68 15.12 17.83 38.66 35.39 10.78 409.88 110.36 136.66 177.32 68.81 197.36 230.96 0.00 0.00 0.68 39.64 209.64 229.70 7 ER1a ExonRegion 0 8.25 0.00 0.52 0.00 5.97 7.67 4.37 1.36 3.30 0.45 83.13 4.77 2.97 35.91 7.69 38.80 50.42 0.00 0.00 0.00 14.92 79.86 79.42 8 E1_Ab KnownBoundary 0 25.71 0.00 3.61 0.00 28.52 7.61 15.81 4.93 12.24 1.67 213.58 11.25 8.28 30.14 10.14 96.56 116.97 0.00 0.00 0.00 40.40 223.87 242.09 9 ER1b ExonRegion 0 6.63 0.00 0.41 0.79 3.53 3.88 2.53 4.39 12.93 2.59 203.84 10.50 7.57 64.27 13.27 73.65 134.04 0.00 0.00 0.00 30.45 103.70 113.40 10 E1_Ac KnownBoundary 1 13.48 0.00 0.00 3.63 0.00 0.00 4.06 15.69 41.58 7.71 664.64 6.30 12.99 177.88 50.81 125.01 474.61 0.00 0.00 0.00 87.66 192.95 223.22 11 ER1c ExonRegion 1 8.34 0.00 5.42 4.66 5.73 7.45 3.20 20.60 38.66 3.69 581.92 35.59 36.39 314.49 55.30 219.46 347.25 0.00 0.00 0.00 56.37 478.83 406.96 12 E1_Da KnownBoundary 0 6.52 0.00 8.22 3.80 8.23 9.26 2.16 14.33 23.93 2.69 119.29 0.00 6.33 112.72 24.11 81.69 76.67 0.00 0.00 0.00 0.00 260.98 187.37 13 E1a_E3a KnownJunction 1 6.74 0.00 1.48 0.00 8.40 2.90 2.25 17.83 21.87 1.13 358.56 19.96 6.66 150.86 40.18 233.70 185.88 0.00 0.00 0.00 34.66 362.93 341.96 14 E1b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER1d ExonRegion 0 8.03 0.00 6.18 2.56 4.35 5.35 2.65 23.12 32.73 7.69 246.28 3.79 3.32 119.03 25.39 76.78 140.43 0.00 0.00 0.00 19.83 210.26 193.33 16 E1c_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER1e ExonRegion 0 2.03 0.00 2.65 2.04 0.00 4.43 1.32 7.42 21.05 6.88 173.48 1.08 0.20 46.63 14.63 39.88 115.81 0.00 0.00 0.00 25.34 93.41 110.12 18 ER2a ExonRegion 0 0.00 0.00 2.96 0.00 0.81 1.89 2.16 3.32 5.53 0.00 28.87 0.17 2.69 14.91 7.62 12.83 31.65 0.00 0.00 0.00 10.76 28.97 41.55 19 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 I2_AR2 ActiveIntronRegion 0 5.62 0.00 1.60 1.25 5.15 1.18 10.01 10.90 48.75 0.00 89.49 17.28 5.14 17.61 6.84 23.44 51.00 0.00 0.51 0.00 22.53 124.54 177.44 21 I2_SR2 SilentIntronRegion 0 8.36 0.17 4.30 1.11 10.24 1.75 9.41 16.83 50.22 1.79 115.72 28.99 12.42 33.50 8.54 42.25 73.15 0.00 0.54 0.00 22.22 136.02 247.58 22 I2_AR3 ActiveIntronRegion 1 25.48 0.00 2.12 2.60 4.56 2.06 5.60 11.21 47.67 3.98 249.53 19.25 7.23 117.84 21.52 118.40 272.19 0.00 0.00 0.00 30.14 120.48 231.16 23 ER3a ExonRegion 0 31.08 5.19 8.38 10.77 31.50 47.78 14.38 71.94 161.14 23.32 1143.77 197.70 144.27 319.28 83.35 379.04 803.52 0.00 0.00 0.00 60.72 678.12 795.86 24 E3_Da KnownBoundary 1 62.16 3.29 12.98 18.31 82.34 82.00 45.49 95.99 213.97 30.14 1556.18 288.69 275.96 529.64 122.13 475.60 1056.94 0.00 0.00 0.00 73.95 1017.70 821.88 25 ER3b ExonRegion 0 74.93 3.04 20.70 12.21 69.68 51.67 39.17 133.72 245.65 39.26 1830.93 539.91 358.31 677.21 172.40 724.74 1330.06 0.27 0.00 0.50 144.16 1361.91 1282.06 26 E3b_E4a KnownJunction 0 79.94 0.00 28.18 10.22 85.99 50.37 20.27 138.75 255.61 32.37 1445.89 605.60 417.83 585.09 155.51 693.49 1074.99 2.57 0.00 0.00 118.43 1313.09 1280.45 27 ER4a ExonRegion 0 77.01 4.80 29.72 15.16 86.38 44.26 52.87 125.66 263.11 39.81 1790.10 583.89 397.55 703.35 189.90 820.14 1371.34 0.43 0.00 0.57 166.55 1511.15 1478.61 28 E4a_E5a KnownJunction 0 65.12 8.88 31.46 17.31 93.29 46.39 41.47 123.96 274.85 39.51 1558.92 562.98 468.48 501.44 144.63 602.92 1098.36 0.00 0.00 0.00 91.68 1482.16 1307.85 29 E4a_E6a NovelJunction 1 21.41 0.00 1.83 0.00 0.00 2.73 2.03 26.25 14.35 9.27 114.71 0.00 7.47 5.77 17.80 78.18 117.34 0.00 0.00 0.00 0.00 8.76 25.10 30 ER5a ExonRegion 0 76.87 4.86 28.74 17.78 83.78 50.38 53.28 131.18 290.29 39.12 2015.05 664.19 486.94 611.31 170.13 765.74 1350.36 0.00 0.00 0.73 137.94 1987.59 1691.68 31 E5a_E6a NovelJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 10.82 6.04 14.81 1.67 43.22 0.00 0.00 0.00 6.06 28.88 27.02 0.00 0.00 0.00 12.05 77.22 66.41 32 E5a_E6b KnownJunction 0 59.71 7.76 37.08 27.40 148.13 29.76 56.53 159.12 289.87 36.59 1816.30 876.59 542.33 642.89 214.85 670.85 1280.97 0.00 0.00 0.00 110.95 1477.81 1354.46 33 ER6a ExonRegion 0 56.21 0.69 5.24 8.55 37.68 15.12 17.83 38.66 35.39 10.78 409.88 110.36 136.66 177.32 68.81 197.36 230.96 0.00 0.00 0.68 39.64 209.64 229.70 34 E6_Ab KnownBoundary 0 79.35 0.00 3.87 9.32 63.16 34.98 36.04 43.78 51.07 9.67 368.15 154.40 267.19 211.31 103.59 206.70 247.22 0.00 0.00 0.00 48.12 163.13 220.32 35 ER6b ExonRegion 0 127.04 8.37 40.59 31.23 136.97 66.21 79.03 190.41 321.12 49.16 2089.62 733.46 542.20 826.44 235.82 903.81 1428.14 0.00 0.00 1.86 176.21 1927.81 1708.73 36 E6a_E7a KnownJunction 0 181.37 19.86 47.84 32.16 176.57 57.98 35.86 167.58 334.78 52.33 1874.32 658.56 512.30 784.28 228.32 935.65 1240.86 0.00 0.00 0.00 206.95 1652.02 1606.79 37 ER7a ExonRegion 0 147.01 4.72 44.72 31.38 161.24 60.32 76.06 195.77 358.28 47.77 2401.24 725.63 639.84 912.63 248.85 1030.97 1466.02 0.00 0.90 1.43 167.15 1959.54 1917.29 38 E7a_E8a KnownJunction 0 184.48 2.70 46.15 30.17 133.53 59.06 65.45 201.39 405.20 60.20 2720.64 763.45 644.28 823.30 228.07 1203.62 1571.20 0.00 0.00 3.00 185.58 2479.04 2132.11 39 ER8a ExonRegion 0 149.53 6.27 51.75 27.43 137.97 70.70 67.92 220.16 375.99 52.15 2927.68 821.82 653.51 890.52 284.35 880.76 1735.99 0.00 0.00 0.79 225.90 2054.51 1715.09 40 E8_Da KnownBoundary 0 239.97 3.29 67.41 39.09 206.54 52.24 59.31 205.66 394.41 39.35 2304.22 1033.99 521.88 710.11 316.58 699.65 1426.74 0.00 0.00 0.00 225.61 1640.75 1478.15 41 ER8b ExonRegion 0 75.85 3.08 47.72 21.36 63.90 44.60 40.31 133.81 231.03 34.23 1592.75 417.53 342.45 688.86 247.40 682.41 1132.22 0.00 0.59 0.66 178.02 1217.06 1287.33 42 E8b_E9a KnownJunction 0 83.87 0.00 59.02 34.19 123.77 81.20 68.81 174.15 243.75 43.92 1725.96 388.18 332.61 813.71 231.04 1082.71 1087.42 0.00 0.00 0.00 134.55 1478.36 1823.70 43 E8b_E10a NovelJunction 0 0.00 2.96 3.16 2.06 0.00 0.00 0.00 18.32 18.87 1.48 58.38 6.45 0.00 4.65 0.00 3.16 8.51 0.00 0.00 0.00 8.40 8.94 11.01 44 ER9a ExonRegion 0 87.00 3.49 77.40 44.65 104.12 57.66 53.67 191.70 279.37 48.34 1839.58 435.11 328.64 780.22 287.72 948.83 1214.84 0.00 4.17 0.60 180.87 1772.85 1770.51 45 E9a_E10a KnownJunction 0 136.10 0.00 105.20 38.66 143.72 47.42 49.59 242.05 347.91 63.66 1933.75 368.37 220.28 735.01 340.19 1104.67 1462.74 0.00 9.41 0.00 233.39 2583.63 2131.26 46 ER10a ExonRegion 0 296.82 6.28 70.21 39.57 222.31 74.47 92.25 178.60 226.23 40.02 1314.40 372.34 196.83 505.52 321.32 594.70 823.54 0.00 0.45 0.67 113.10 1537.81 1087.92