Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HBS1L Gene 0 40.56 50.47 30.21 54.26 52.35 60.46 43.42 43.68 40.72 36.74 69.50 128.53 92.30 67.68 62.32 83.93 82.96 18.15 31.82 56.29 37.80 46.87 29.26 2 445176 Transcript 0 0.00 0.00 0.20 0.00 0.09 0.00 0.00 0.00 0.04 0.00 0.00 0.14 0.00 0.00 0.00 0.20 0.00 0.00 0.11 0.00 0.07 0.00 0.00 3 415177 Transcript 0 0.00 0.00 0.00 2.76 0.00 5.79 0.00 4.19 1.59 1.67 0.00 0.00 0.00 4.71 0.00 4.27 3.65 4.60 0.00 3.07 0.00 0.00 8.54 4 367822 Transcript 0 0.00 0.00 0.00 1.36 0.00 0.00 3.97 1.15 0.00 1.91 1.29 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 5 367837 Transcript 0 0.00 1.36 2.18 2.27 2.08 0.00 0.00 0.77 0.55 0.00 0.00 0.00 3.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 314674 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 367820 Transcript 0 10.45 15.52 18.98 15.32 8.32 24.70 16.69 11.75 27.92 25.92 42.80 13.50 7.30 0.00 5.81 36.32 58.63 11.81 17.51 30.42 37.93 17.45 11.69 8 367826 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 367824 Transcript 0 4.28 11.45 3.84 58.26 25.90 59.99 11.21 37.86 33.01 10.21 2.63 5.64 8.45 2.85 3.26 2.74 9.09 1.43 7.14 4.85 2.90 5.38 2.27 10 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.59 0.00 0.00 0.00 0.00 1.03 0.00 0.00 1.52 0.00 1.39 0.00 1.72 0.00 0.00 2.20 0.00 0.00 11 ER1b ExonRegion 0 1.16 1.51 0.00 1.06 0.00 1.12 1.35 0.00 1.85 0.81 3.99 1.05 0.00 18.23 6.60 10.40 4.53 6.29 2.06 4.63 4.98 1.61 3.27 12 E1_Ac KnownBoundary 0 3.63 3.03 0.00 2.00 0.00 0.00 4.06 0.00 1.68 0.00 5.21 0.00 0.00 41.79 24.11 17.43 14.12 9.82 4.05 15.72 15.75 0.00 0.00 13 E1_Ad KnownBoundary 0 3.04 30.32 0.00 2.60 6.88 16.13 15.46 3.12 5.96 7.31 11.85 0.00 0.00 30.26 27.69 49.39 40.39 11.61 11.11 14.89 7.78 2.45 7.43 14 ER1c ExonRegion 0 9.17 32.40 0.00 5.72 14.98 23.47 20.21 5.88 7.41 6.88 31.70 4.33 0.00 63.34 38.10 76.09 60.52 25.25 18.48 29.36 28.50 11.11 19.38 15 ER1d ExonRegion 1 73.78 133.93 29.79 47.28 87.66 161.68 104.42 52.64 59.77 53.88 200.29 40.08 34.50 161.54 111.57 351.09 318.81 140.98 112.78 164.40 176.32 118.41 188.70 16 E1_Da KnownBoundary 0 10.00 19.01 14.52 6.99 3.82 21.46 12.54 12.20 16.32 17.78 22.85 34.51 14.12 4.71 16.56 44.35 30.67 6.38 9.04 17.71 28.79 16.29 19.12 17 E1a_E1e KnownJunction 0 10.45 15.52 18.98 15.32 8.32 24.70 16.69 11.75 27.92 25.92 42.80 13.50 7.30 0.00 5.81 36.32 58.63 11.81 17.51 30.42 37.93 17.45 11.69 18 E1_Ae KnownBoundary 0 3.04 5.20 1.39 8.59 0.00 11.41 7.86 6.94 12.01 12.68 27.06 24.76 13.64 14.13 5.81 21.87 57.32 4.06 16.38 16.75 27.74 12.86 4.01 19 ER1e ExonRegion 0 12.70 18.30 20.01 17.72 10.70 46.46 18.54 24.20 41.58 31.35 77.96 69.27 51.59 43.31 44.49 65.39 105.63 21.56 22.30 43.97 71.99 31.25 17.62 20 ER1f ExonRegion 1 7.53 11.71 17.18 27.21 14.02 21.12 12.14 42.12 55.76 46.87 216.56 69.75 71.74 100.79 51.42 59.83 295.00 25.73 35.98 90.82 189.07 31.72 20.39 21 E1b_E2a KnownJunction 1 6.15 5.59 24.48 41.99 32.85 13.17 16.96 73.85 79.77 71.56 433.21 150.35 84.09 186.36 120.77 89.72 616.08 38.14 52.71 227.99 372.02 56.89 36.19 22 E1b_E3a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.06 0.00 0.00 5.47 6.06 3.67 0.00 6.05 0.00 0.00 0.00 0.00 0.00 23 ER2a ExonRegion 0 9.27 35.13 44.08 83.07 23.43 32.81 20.60 77.20 94.67 90.66 209.75 184.92 133.59 295.29 148.84 350.04 403.31 79.57 146.86 236.04 186.48 199.32 162.85 24 E2a_E3a KnownJunction 1 10.45 56.50 62.06 105.81 36.76 63.60 44.07 86.67 103.04 92.75 179.62 98.43 113.79 282.24 144.14 628.89 257.41 168.59 239.35 234.13 118.18 169.43 265.91 25 E2a_E4a KnownJunction 0 0.00 0.00 0.00 2.76 0.00 5.79 0.00 4.19 1.59 1.67 0.00 0.00 0.00 4.71 0.00 4.27 3.65 4.60 0.00 3.07 0.00 0.00 8.54 26 ER3a ExonRegion 0 16.81 73.56 53.59 80.56 115.55 168.94 108.26 86.75 86.41 91.89 257.89 396.73 280.51 233.46 139.38 320.00 325.14 86.02 97.96 176.93 162.03 123.14 119.52 27 E3a_E4a KnownJunction 0 12.59 192.33 80.01 129.55 115.37 226.74 165.26 117.18 95.60 128.24 249.85 471.00 301.44 284.54 158.85 278.90 387.56 54.76 104.76 224.60 182.68 132.82 106.79 28 ER4a ExonRegion 0 65.36 162.25 75.63 148.99 99.03 152.30 91.05 129.55 128.17 133.46 339.52 667.29 425.04 325.74 165.39 405.61 400.53 79.21 128.82 218.79 177.12 197.41 114.24 29 E4a_E5a KnownJunction 0 24.23 41.77 7.98 21.61 23.60 2.90 20.18 20.82 21.87 22.99 49.85 94.53 80.03 33.90 14.83 51.18 53.67 1.91 3.58 24.54 6.12 22.90 15.11 30 E4a_E6a KnownJunction 0 56.31 125.04 79.51 147.87 132.68 148.61 113.10 144.62 152.69 117.82 352.62 668.92 336.34 253.93 190.00 510.29 441.61 119.55 168.38 215.91 178.10 275.06 176.27 31 ER5a ExonRegion 0 13.02 21.08 19.62 25.78 32.16 21.41 39.85 23.74 27.38 21.28 53.61 156.61 103.61 28.73 20.72 48.68 28.21 2.90 4.86 30.78 5.49 15.42 13.60 32 E5_Da KnownBoundary 0 6.15 19.34 34.62 22.14 35.40 5.05 33.78 25.92 36.75 18.16 62.65 174.51 178.40 28.25 26.70 48.11 20.29 0.00 4.80 39.31 6.12 8.33 12.98 33 ER5b ExonRegion 0 22.09 19.73 14.68 17.75 36.67 17.92 39.57 25.04 23.17 21.72 42.20 116.27 88.93 30.11 26.90 36.70 37.29 2.53 7.05 18.74 5.60 14.92 11.32 34 ER5c ExonRegion 0 0.00 0.00 0.00 1.36 0.00 0.00 3.97 1.15 0.00 1.91 1.29 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 35 I5 Intron 0 11.79 12.56 11.73 13.36 22.02 14.08 26.78 11.90 10.35 7.72 7.57 21.99 16.31 6.32 9.99 12.68 9.94 1.85 2.08 10.26 1.55 4.18 7.22 36 I5_SR1 SilentIntronRegion 0 11.05 14.57 9.98 9.12 23.06 10.68 27.32 8.76 11.85 6.64 7.51 17.72 11.19 5.10 10.26 15.88 14.43 1.35 2.71 8.53 1.61 3.79 8.20 37 I5_AR2 ActiveIntronRegion 0 11.82 11.35 8.81 9.81 25.52 17.86 27.23 12.05 6.52 5.43 5.18 20.64 19.96 5.59 8.91 10.93 6.98 3.15 2.38 10.72 1.71 4.09 8.63 38 I5_SR2 SilentIntronRegion 0 10.96 4.07 25.37 33.72 7.71 15.99 26.77 29.31 13.04 12.62 11.06 33.42 17.82 9.39 14.62 11.29 11.42 1.48 0.64 16.81 0.00 5.38 1.41 39 I5_AR3 ActiveIntronRegion 0 13.81 12.86 16.93 22.90 18.65 14.99 25.88 14.17 13.03 12.53 10.82 30.59 21.03 9.37 10.37 9.79 5.57 0.99 0.77 11.76 1.60 4.96 4.70 40 I5_AR1 ActiveIntronRegion 1 29.39 24.62 7.61 11.68 24.41 4.01 19.69 12.28 5.84 4.75 0.00 26.43 11.66 0.00 3.59 12.98 2.62 2.37 2.53 6.33 0.44 3.31 4.66 41 I5_AR3 ActiveIntronRegion 0 10.68 14.91 4.16 6.16 16.32 4.09 17.25 9.81 4.75 5.67 1.07 17.68 13.55 0.44 3.72 6.38 6.02 0.31 2.83 8.96 0.24 2.58 0.88 42 ER6a ExonRegion 0 38.87 112.76 78.54 169.37 112.90 153.77 98.91 139.53 136.96 140.91 330.65 627.61 338.84 281.21 166.73 446.94 409.67 94.86 145.30 213.47 194.41 243.39 114.48 43 E6_Da NovelBoundary 0 39.41 0.00 5.03 13.98 11.71 0.00 13.91 10.19 0.00 1.48 0.00 11.70 0.00 0.00 11.99 8.20 9.16 0.00 0.00 12.14 2.97 2.94 3.93 44 E6a_E7a KnownJunction 0 55.12 217.92 79.54 207.00 142.70 169.22 164.77 176.99 185.44 167.97 385.99 764.80 526.59 284.89 234.13 623.43 396.91 96.84 207.91 246.15 211.16 287.55 167.40 45 ER7a ExonRegion 0 48.20 152.15 66.23 122.82 99.36 184.76 104.75 109.29 114.48 103.98 231.48 488.70 284.81 283.52 186.12 357.11 317.50 92.39 145.44 187.33 203.78 171.25 133.24 46 E7_Da NovelBoundary 0 3.63 0.00 5.80 3.73 0.00 11.36 0.00 3.98 0.00 3.98 0.00 0.00 0.00 2.24 0.00 0.00 9.44 0.00 0.00 6.20 0.00 2.76 12.38 47 E7a_E8a KnownJunction 0 59.34 94.85 63.27 131.19 140.58 202.72 90.27 87.36 153.01 111.02 213.37 358.62 214.11 266.76 264.54 381.27 370.08 76.81 170.83 207.99 234.01 178.13 155.19 48 ER8a ExonRegion 0 67.24 149.64 76.02 116.45 131.34 206.78 107.95 105.34 117.41 117.37 254.27 309.14 234.05 300.66 200.76 339.50 347.39 87.35 141.65 199.11 186.53 158.25 135.01 49 E8a_E9a KnownJunction 0 79.50 160.37 76.67 104.02 102.21 214.14 94.77 83.22 97.54 100.30 166.36 256.58 173.20 256.93 182.21 365.46 245.54 49.83 119.82 151.87 107.31 130.79 117.29 50 E9a_E16b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 E9b_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 ER9a ExonRegion 0 65.74 121.63 74.75 91.23 83.12 185.67 87.80 79.08 99.81 100.57 186.52 291.43 198.74 265.04 179.33 355.91 257.06 62.48 131.79 140.16 146.00 125.79 104.25 53 ER9b ExonRegion 0 67.20 111.34 74.75 90.29 92.98 169.63 91.35 75.19 102.82 97.77 191.84 312.80 175.88 265.95 156.67 373.74 281.40 66.52 115.47 135.11 166.93 144.80 118.93 54 ER9c ExonRegion 0 65.63 131.46 85.40 101.60 110.74 176.76 92.33 100.13 110.06 103.00 256.09 356.78 173.00 278.32 158.21 296.76 344.88 66.65 131.74 180.20 193.14 157.20 114.17 55 E9c_E11a KnownJunction 0 86.53 169.44 69.54 97.96 94.65 194.26 89.69 100.30 107.06 103.02 242.32 448.35 175.64 248.34 175.78 216.10 302.57 88.05 144.38 154.74 194.72 143.29 91.08 56 E10a_E17a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 ER10a ExonRegion 0 0.00 0.00 0.61 0.00 0.27 0.00 0.00 0.00 0.12 0.00 0.00 0.43 0.00 0.00 0.00 0.59 0.00 0.00 0.32 0.00 0.22 0.00 0.00 58 ER11a ExonRegion 0 73.13 143.06 70.96 95.75 84.64 169.50 96.09 99.18 100.45 100.69 235.66 319.41 193.92 238.67 177.35 278.59 272.54 78.13 116.04 159.27 186.58 132.42 101.12 59 E11a_E12a KnownJunction 0 54.82 251.14 94.35 110.81 75.81 168.71 154.53 109.22 116.46 114.03 294.50 327.11 173.85 279.12 159.59 222.51 274.05 69.35 95.25 165.99 119.17 179.23 77.00 60 ER12a ExonRegion 0 97.81 148.91 87.56 122.79 118.05 216.36 110.84 130.12 107.55 119.25 311.33 421.75 206.92 250.61 209.90 265.71 300.51 67.97 119.09 184.82 142.24 181.35 84.03 61 E12a_E13a KnownJunction 0 114.54 132.15 78.71 139.74 199.15 209.71 114.12 144.62 118.05 118.73 246.64 350.81 192.20 234.62 234.63 369.73 281.81 64.17 73.13 197.31 86.36 193.25 76.66 62 ER13a ExonRegion 0 113.90 135.54 87.13 146.89 139.34 210.87 121.02 142.54 125.02 142.79 290.41 393.17 283.51 202.75 219.49 275.38 282.28 60.98 113.22 181.55 62.97 211.32 77.57 63 E13a_E14a KnownJunction 0 212.93 296.39 108.98 144.77 188.88 270.36 178.86 159.37 148.12 153.17 277.75 633.06 436.34 257.52 301.13 332.48 295.09 57.21 147.67 280.09 71.54 336.05 98.51 64 ER14a ExonRegion 0 164.51 267.40 78.74 101.92 147.48 223.11 129.04 133.09 108.65 131.50 234.22 518.78 342.17 265.91 228.36 320.69 293.97 51.04 87.76 208.57 107.82 193.31 88.52 65 E14_Da NovelBoundary 0 9.71 16.97 1.83 31.60 11.63 10.56 13.91 20.37 7.78 11.07 7.32 5.55 6.66 0.00 0.00 0.00 0.00 0.00 9.22 6.14 0.00 5.27 0.00 66 E14a_E15b KnownJunction 0 146.62 325.21 80.19 83.27 176.66 175.30 194.10 129.51 87.09 111.91 255.06 541.08 304.53 216.14 209.16 293.51 270.59 53.35 45.08 156.60 127.57 138.88 43.71 67 I14 Intron 0 1.65 5.39 0.71 12.67 6.89 19.17 6.61 11.04 8.33 3.87 1.21 5.58 4.52 1.44 1.25 1.62 3.86 0.86 6.96 4.48 0.86 1.95 0.46 68 I14_SR1 SilentIntronRegion 0 0.49 5.88 0.21 8.46 5.57 17.19 7.50 10.13 7.67 4.15 1.12 3.80 4.02 0.88 1.62 1.03 3.82 1.28 5.89 5.17 0.51 2.41 0.68 69 I14_SR2 SilentIntronRegion 0 4.59 4.96 1.98 24.24 10.89 26.36 5.39 14.66 10.98 3.71 1.57 10.50 6.29 2.93 0.56 3.23 4.48 0.00 10.37 3.45 1.79 1.13 0.00 70 E15_Aa NovelBoundary 0 0.00 24.34 4.49 41.89 18.93 46.22 16.12 56.02 45.49 22.43 2.26 11.40 15.10 0.00 4.45 0.00 17.77 1.82 16.66 14.32 5.50 5.88 0.00 71 ER15a ExonRegion 0 4.28 11.45 3.84 58.26 25.90 59.99 11.21 37.86 33.01 10.21 2.63 5.64 8.45 2.85 3.26 2.74 9.09 1.43 7.14 4.85 2.90 5.38 2.27 72 E15_Ab KnownBoundary 0 0.00 2.83 4.26 99.85 44.31 37.54 21.90 50.69 42.48 6.15 9.05 12.15 0.00 4.53 6.30 8.20 3.55 3.23 7.91 3.13 0.00 2.45 3.41 73 ER15b ExonRegion 0 105.95 212.16 94.11 191.03 223.55 293.27 175.27 164.59 123.70 125.54 253.93 430.41 298.45 230.50 235.00 256.69 287.94 60.90 87.38 177.72 131.40 179.08 82.93 74 E15a_E16a KnownJunction 0 201.52 219.57 129.98 204.90 246.77 213.29 116.02 159.20 122.77 115.83 240.75 427.49 346.08 243.34 225.11 294.11 329.97 87.09 114.26 200.57 203.49 206.30 143.24 75 I15_AR3 ActiveIntronRegion 0 2.12 5.08 1.23 1.36 10.70 0.00 3.97 0.00 7.00 5.73 3.87 10.10 23.45 7.31 0.00 2.97 3.30 0.00 3.19 3.19 0.00 1.39 5.87 76 E16_Aa NovelBoundary 0 16.37 2.70 7.92 11.82 7.22 0.00 22.17 9.16 9.06 7.01 5.16 13.80 6.82 5.06 0.00 0.00 19.26 1.78 8.94 9.27 8.34 10.96 3.76 77 ER16a ExonRegion 0 111.52 146.73 98.11 191.28 141.27 179.64 92.90 181.75 123.86 119.81 210.02 538.96 409.18 300.02 315.79 402.38 303.01 56.55 135.42 199.10 165.33 158.61 149.35 78 E16a_E17a KnownJunction 0 141.21 240.15 141.60 256.78 205.43 227.09 157.00 223.73 148.73 164.50 393.84 527.87 330.34 286.30 290.62 261.64 480.78 68.56 141.27 170.47 232.96 126.88 115.50 79 ER16b ExonRegion 0 108.92 183.80 115.28 222.05 174.54 188.60 134.53 213.53 134.25 153.16 340.34 535.52 313.87 281.47 248.62 303.16 446.38 64.24 152.90 196.89 212.40 138.79 128.99 80 ER17a ExonRegion 0 232.23 275.32 106.10 206.05 264.14 265.14 173.54 165.49 110.08 127.94 258.10 380.83 273.83 256.28 274.69 321.75 330.27 69.52 133.20 196.13 173.41 145.81 107.39 81 E17a_E18a KnownJunction 0 451.64 486.76 86.72 199.58 391.43 442.53 346.37 196.79 121.06 136.27 329.87 398.08 379.03 315.97 390.88 667.77 418.98 120.92 229.47 237.00 191.88 262.20 242.52 82 E17a_E19a NovelJunction 0 9.71 15.13 13.22 54.57 56.28 89.61 18.37 30.39 22.97 14.16 2.68 0.00 6.82 2.47 4.45 11.45 11.78 0.00 0.00 5.75 2.47 0.00 3.50 83 E18_Aa NovelBoundary 0 24.67 12.76 5.47 10.22 24.87 19.02 27.65 11.75 5.12 0.00 7.05 12.60 6.82 2.12 4.94 20.76 0.00 6.51 4.24 2.94 6.12 0.00 0.00 84 ER18a ExonRegion 0 203.02 206.18 71.04 128.29 196.63 219.87 157.87 100.10 76.31 75.51 198.28 255.78 306.85 256.55 293.17 298.48 252.89 56.55 106.73 134.53 115.12 120.95 100.89 85 E18a_E19a KnownJunction 0 308.13 181.09 102.01 145.47 289.90 201.02 144.81 138.42 99.28 92.00 194.94 265.89 278.88 223.56 237.96 238.31 212.90 39.38 74.07 164.71 129.30 140.10 72.05 86 ER19a ExonRegion 0 200.56 223.64 97.02 165.67 180.22 177.01 124.53 128.93 98.32 98.63 193.89 249.05 203.97 215.54 253.75 193.48 209.89 26.14 92.64 139.05 101.78 118.16 63.25 87 E19a_E20a KnownJunction 0 384.07 416.24 107.51 202.84 231.15 146.51 113.76 127.33 111.75 128.27 188.47 239.03 191.22 181.06 236.85 192.26 203.65 23.67 66.45 91.79 94.70 96.81 57.53 88 ER20a ExonRegion 1 191.46 170.91 93.85 160.97 182.09 162.25 102.97 122.51 87.66 97.72 108.21 282.49 181.61 98.62 213.80 112.38 102.32 12.57 51.01 91.27 25.60 141.03 36.34 89 E20_Da KnownBoundary 0 7.26 3.09 1.27 12.05 3.57 0.00 11.04 21.93 9.23 4.54 0.00 12.30 6.82 4.94 4.45 3.67 18.14 0.00 4.33 18.79 2.59 6.12 0.00 90 ER20b ExonRegion 0 10.41 4.31 12.36 18.41 9.21 4.99 11.06 6.05 11.05 5.26 1.49 7.08 15.67 2.76 3.96 4.96 3.77 2.81 3.32 19.05 1.98 1.79 2.44 91 ER20c ExonRegion 0 0.00 1.36 2.18 2.27 2.08 0.00 0.00 0.77 0.55 0.00 0.00 0.00 3.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 92 IG50_AR2 ActiveIntergenicRegion 0 3.32 2.51 10.05 8.52 5.47 8.30 7.58 7.26 13.52 5.39 1.24 5.50 6.02 1.66 3.29 5.67 0.00 6.32 1.91 18.64 3.64 2.35 0.47