Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 UST Gene 0 21.53 6.64 1.63 3.88 10.74 4.26 6.39 4.26 3.87 1.43 138.91 14.73 157.66 113.51 141.33 117.56 153.89 1.83 3.13 4.80 76.94 93.96 65.28 2 367463 Transcript 0 13.32 2.12 0.53 2.05 6.10 2.74 2.42 3.48 3.74 0.83 212.78 15.92 318.37 201.52 210.50 196.78 260.28 0.23 0.40 1.23 116.04 107.23 97.33 3 473631 Transcript 0 1.89 0.00 0.00 0.18 0.24 0.00 0.00 0.46 0.49 0.00 8.53 1.34 23.35 8.81 18.87 8.37 7.10 0.00 0.00 0.00 2.00 0.37 1.06 4 466695 Transcript 0 1.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.72 0.03 1.25 0.46 0.66 1.94 0.02 0.00 0.00 0.00 0.00 0.70 0.00 5 IG6_AR2 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 13.80 0.00 5.50 20.67 13.26 29.15 9.47 0.00 0.00 0.00 23.38 2.11 22.05 6 ER1a ExonRegion 1 1.90 0.89 1.06 1.48 1.27 1.07 0.19 2.96 1.07 0.00 80.08 0.52 35.63 92.39 83.95 62.53 101.69 0.00 0.00 0.82 57.94 22.57 22.14 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 3.33 3.48 0.00 0.00 1.60 1.33 0.00 126.24 0.00 132.30 131.50 162.80 154.66 237.87 0.00 0.00 5.56 115.77 49.60 81.18 8 I1_AR1 ActiveIntronRegion 0 31.26 1.24 0.48 3.00 9.99 0.00 1.61 2.91 1.44 0.30 5.04 3.72 40.20 2.09 23.35 18.08 17.50 0.00 0.00 0.37 1.91 2.53 7.40 9 I1_AR8 ActiveIntronRegion 1 0.00 0.00 0.00 1.36 2.68 0.00 0.00 0.00 0.00 0.00 0.00 4.33 39.28 0.00 8.70 1.49 6.19 0.00 0.00 0.00 0.00 0.00 2.94 10 I1_AR9 ActiveIntronRegion 1 0.00 0.00 0.00 1.36 3.34 0.00 0.00 0.00 0.00 0.00 0.00 4.33 35.18 0.00 10.88 2.97 8.66 0.00 0.00 0.00 0.00 0.00 2.94 11 ER2a ExonRegion 1 9.24 0.00 0.00 1.95 2.98 0.00 2.41 0.67 0.36 0.10 175.06 0.00 109.26 206.12 180.01 199.67 245.69 0.00 0.00 0.87 135.83 87.27 89.30 12 E2a_E3a KnownJunction 1 10.30 0.00 0.00 0.00 3.57 0.00 8.74 1.60 1.24 0.00 159.83 0.00 92.53 206.61 154.89 194.22 227.68 0.00 0.00 0.00 107.74 119.59 67.27 13 ER3a ExonRegion 1 8.66 2.66 0.33 2.76 4.72 2.48 2.06 3.96 3.02 0.81 256.75 10.80 279.69 191.01 190.66 192.12 308.02 0.00 0.00 0.70 109.99 97.70 84.82 14 E3a_E4a KnownJunction 1 23.93 3.29 1.83 0.00 4.33 8.69 2.12 9.82 6.22 1.67 407.52 6.15 859.36 312.97 345.88 453.21 519.68 0.00 0.00 0.00 140.11 191.11 204.87 15 E3a_E5a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.27 0.00 0.00 2.41 0.00 0.00 4.77 0.00 0.00 0.00 0.00 5.82 0.00 16 I3_AR2 ActiveIntronRegion 1 4.62 0.00 0.00 0.87 0.00 0.00 0.90 0.00 0.00 0.00 2.23 0.82 33.25 0.31 2.64 5.98 8.07 0.00 0.00 0.00 1.47 0.00 2.03 17 ER4a ExonRegion 1 18.05 0.68 1.16 0.57 6.99 2.24 2.10 6.48 9.50 1.15 391.57 16.96 706.63 336.78 324.86 343.86 379.60 0.00 0.00 0.35 135.96 169.29 141.53 18 E4_Ab KnownBoundary 1 14.22 2.76 0.00 1.50 12.14 0.00 2.12 6.00 10.30 0.00 334.35 26.26 697.84 228.03 220.90 223.36 233.75 0.00 0.00 0.00 100.51 137.29 54.97 19 ER4b ExonRegion 0 8.27 1.80 0.00 3.00 7.91 0.00 0.84 5.97 6.43 0.05 304.21 40.24 525.50 201.98 164.84 182.31 261.15 0.00 0.00 2.13 94.66 113.98 67.68 20 E4a_E5a KnownJunction 1 3.11 0.00 0.00 5.43 3.14 0.00 0.00 8.38 1.07 0.00 245.17 65.12 491.85 200.48 229.19 133.38 240.86 0.00 0.00 0.00 78.83 112.18 98.59 21 ER5a ExonRegion 1 12.11 2.69 0.00 2.54 4.74 2.57 1.75 3.84 4.22 0.00 267.00 38.63 610.53 215.28 233.10 174.27 298.45 0.00 0.00 0.72 107.11 131.18 93.99 22 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.48 0.00 26.78 9.77 8.90 4.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E5a_E7a KnownJunction 1 5.85 0.00 0.00 3.73 16.04 0.00 0.00 0.00 1.48 0.00 182.47 37.06 526.59 208.19 187.53 166.79 159.79 0.00 0.00 0.00 86.36 130.37 76.91 24 I5_SR2 SilentIntronRegion 1 1.42 0.00 0.00 0.00 1.80 0.00 0.30 0.00 0.00 0.00 0.65 0.88 40.26 1.46 5.24 2.00 4.81 0.00 0.00 0.00 0.00 0.70 1.97 25 I5_AR5 ActiveIntronRegion 0 13.68 0.00 0.00 0.00 1.93 0.00 0.90 0.00 0.00 0.00 5.44 0.00 32.54 3.65 6.43 17.83 15.08 0.00 0.00 0.00 9.87 0.00 5.47 26 I5_AR7 ActiveIntronRegion 1 0.00 0.00 0.00 1.36 0.00 0.00 0.00 0.00 0.00 1.15 1.93 8.66 48.46 6.23 32.40 36.66 7.15 0.00 0.00 0.00 2.20 0.00 13.70 27 I5_AR8 ActiveIntronRegion 1 7.20 0.00 0.00 0.39 2.10 0.00 1.56 1.35 0.24 0.28 1.90 1.86 39.72 5.03 13.03 21.88 22.95 0.00 0.00 0.00 5.63 0.82 4.25 28 ER6a ExonRegion 1 3.77 0.00 0.00 0.36 0.48 0.00 0.00 0.92 0.98 0.00 7.59 2.68 19.91 7.85 28.83 12.54 14.20 0.00 0.00 0.00 4.00 0.74 2.13 29 ER7a ExonRegion 0 14.34 1.06 0.00 2.38 6.83 5.71 2.07 5.26 3.81 0.50 231.32 25.89 424.06 215.91 186.89 170.17 295.23 0.00 0.00 0.00 132.67 117.40 97.81 30 E7a_E8a KnownJunction 1 17.56 0.00 0.00 3.33 3.74 5.62 0.00 0.00 6.11 1.67 178.52 43.51 418.15 178.41 249.34 132.27 242.36 0.00 0.00 0.00 113.55 90.99 80.92 31 ER8a ExonRegion 0 14.70 2.64 0.00 1.64 6.81 1.57 2.14 3.74 4.49 1.10 227.09 16.55 271.72 222.82 233.50 213.03 256.88 0.00 0.00 0.00 133.76 128.55 121.24 32 E8a_E10a KnownJunction 1 18.15 6.64 0.00 0.00 3.23 2.16 0.00 4.19 5.35 1.67 222.64 32.86 155.02 219.32 295.07 160.56 271.34 0.00 0.00 0.00 165.87 83.46 130.01 33 I8 Intron 0 3.83 0.10 0.14 0.28 1.50 0.55 0.61 0.64 0.51 0.09 13.48 7.61 38.14 12.33 14.49 11.14 18.27 0.03 0.00 0.00 3.44 1.95 3.96 34 I8_AR1 ActiveIntronRegion 0 3.15 0.00 0.00 1.73 1.71 3.11 0.28 0.55 0.00 0.00 22.59 5.36 66.31 25.32 22.82 21.49 42.09 0.59 0.00 0.00 6.56 2.21 10.61 35 I8_SR1 SilentIntronRegion 0 3.47 0.00 0.45 0.10 2.39 0.36 0.59 0.26 0.64 0.00 13.34 3.91 46.52 24.13 29.24 13.87 24.92 0.00 0.00 0.00 4.92 1.86 4.37 36 I8_SR2 SilentIntronRegion 0 3.09 0.35 0.31 0.00 1.38 0.30 1.14 1.28 0.57 1.17 4.42 3.44 36.11 6.05 16.69 15.90 8.65 0.00 0.00 0.00 2.63 1.43 5.47 37 I8_AR3 ActiveIntronRegion 0 2.78 0.19 0.00 0.00 0.50 0.53 0.25 0.00 0.17 0.00 6.21 3.33 34.26 4.03 4.11 15.12 17.17 0.00 0.00 0.00 2.91 1.17 2.08 38 I8_SR3 SilentIntronRegion 0 3.82 0.08 0.00 0.34 1.11 0.15 0.55 0.73 0.30 0.00 6.38 8.66 34.54 3.11 6.44 5.16 11.36 0.00 0.00 0.00 1.91 1.93 2.05 39 I8_AR4 ActiveIntronRegion 1 5.40 0.00 0.00 0.27 1.76 1.21 0.52 1.74 1.71 0.00 57.12 30.71 24.92 24.92 9.90 9.40 17.31 0.00 0.00 0.00 3.77 3.18 5.07 40 Ix_SR1 SilentIntronRegion 0 2.03 0.27 0.00 0.13 0.67 0.00 0.56 0.06 0.66 0.06 9.73 11.50 38.14 6.01 6.20 2.90 10.95 0.00 0.00 0.07 1.94 1.50 2.03 41 I8_AR1 ActiveIntronRegion 1 3.43 0.00 0.00 0.00 0.00 0.25 2.05 1.51 0.00 0.00 52.39 6.27 17.74 15.46 9.37 3.52 6.64 0.00 0.00 0.00 8.79 3.04 2.84 42 ER9a ExonRegion 0 2.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.76 0.05 2.49 0.93 1.32 3.88 0.04 0.00 0.00 0.00 0.00 1.40 0.00 43 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER10a ExonRegion 0 10.40 4.24 0.00 1.49 6.06 1.37 3.22 3.67 3.45 0.30 192.67 13.19 179.81 157.90 174.03 141.87 204.77 0.00 0.39 0.52 112.13 113.79 87.53 45 E10_Da KnownBoundary 0 7.33 9.01 0.00 0.00 11.97 0.00 7.99 1.85 1.56 0.00 178.15 25.21 202.10 171.46 125.60 121.42 209.16 0.00 0.00 0.00 126.77 148.37 94.58 46 ER10b ExonRegion 0 30.49 9.76 2.55 5.44 15.31 6.14 9.64 5.03 4.63 2.19 127.06 16.64 127.88 97.77 141.14 114.98 137.75 3.05 5.16 7.68 72.98 106.12 67.33