Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RSG17 Gene 0 6.20 40.44 23.68 30.89 25.70 85.75 37.06 17.42 22.20 23.55 1.27 3.69 8.13 6.68 8.43 1.02 14.10 9.93 24.62 50.87 36.40 75.60 41.55 2 206262 Transcript 0 1.29 6.18 5.61 3.38 5.42 68.61 10.38 2.41 1.68 5.52 0.00 0.00 0.00 1.64 0.83 0.00 10.19 4.87 12.36 12.84 31.45 13.14 32.63 3 367225 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ER1a ExonRegion 0 2.57 9.73 4.36 2.86 10.83 126.76 18.51 0.63 1.74 3.19 0.00 0.00 0.00 3.29 1.66 0.00 9.06 9.74 19.92 18.00 34.17 26.28 50.41 5 E1a_E2a KnownJunction 0 0.00 2.63 6.86 3.90 0.00 10.45 2.25 4.19 1.62 7.84 0.00 0.00 0.00 0.00 0.00 0.00 11.31 0.00 4.80 7.67 28.73 0.00 14.85 6 E2_Aa NovelBoundary 0 0.00 0.00 0.00 1.60 0.00 7.78 5.70 1.73 2.86 0.00 0.00 0.00 5.84 4.59 0.00 0.00 0.00 4.23 4.05 3.26 0.00 2.69 16.99 7 ER2a ExonRegion 0 0.75 10.46 15.86 7.18 1.47 25.43 6.49 5.53 17.36 12.42 0.00 0.00 0.00 7.40 4.37 0.00 20.58 23.43 27.63 42.29 76.50 60.74 45.66 8 E2a_E3a KnownJunction 0 0.00 8.88 13.99 10.42 11.63 84.89 11.35 12.94 19.04 16.39 0.00 0.00 0.00 14.48 5.19 0.00 14.12 29.89 7.34 50.24 48.50 47.82 51.56 9 ER3a ExonRegion 0 0.00 15.27 19.44 10.51 32.32 288.62 40.01 16.73 23.23 18.34 0.00 2.02 0.00 9.22 5.96 0.00 28.94 23.30 38.68 63.31 109.01 56.86 62.88 10 E3a_E4a KnownJunction 0 37.12 26.77 22.74 11.65 43.80 274.50 54.98 18.20 32.15 31.24 0.00 5.85 0.00 18.31 18.54 24.18 29.17 28.93 52.80 43.98 90.26 77.22 74.95 11 ER4a ExonRegion 0 2.95 23.04 10.57 8.72 16.40 58.79 30.20 16.75 21.27 26.15 0.53 1.93 5.51 8.08 4.64 0.65 20.56 14.66 28.37 50.32 69.08 77.71 46.06 12 E4_Da NovelBoundary 0 0.00 14.87 2.72 2.06 23.09 12.89 17.05 1.56 6.28 2.47 0.00 6.30 0.00 2.41 0.00 0.00 16.64 5.97 4.80 11.76 13.96 17.33 23.56 13 E4a_E5a KnownJunction 0 9.04 17.43 6.03 21.64 8.23 88.93 22.26 24.07 16.70 16.82 5.11 17.71 12.99 7.83 19.41 4.27 17.11 4.44 4.80 20.77 16.99 68.83 29.19 14 I4 Intron 0 0.96 4.40 1.92 4.60 3.27 8.03 9.50 2.65 2.51 2.24 0.40 1.08 4.55 2.30 1.16 0.31 5.05 3.23 4.43 15.87 9.08 17.26 13.33 15 I4_SR1 SilentIntronRegion 0 0.84 3.50 1.68 3.86 2.65 7.13 9.27 2.66 1.98 1.93 0.23 0.72 4.76 2.22 1.23 0.21 5.05 2.94 4.48 15.39 9.03 17.40 13.12 16 I4_AR1 ActiveIntronRegion 0 1.66 10.81 3.60 9.94 7.72 14.56 11.29 2.65 6.21 4.49 1.66 3.67 3.20 2.97 0.69 1.00 5.10 5.36 4.20 19.66 9.61 16.67 15.03 17 E5_Aa NovelBoundary 0 0.00 6.38 7.66 13.48 0.00 10.68 31.05 2.30 4.11 6.04 0.00 6.00 8.44 2.24 4.45 0.00 4.58 0.00 8.47 8.05 3.15 5.57 13.83 18 ER5a ExonRegion 0 8.67 54.41 30.42 44.33 32.38 77.68 44.83 21.31 25.47 27.42 1.87 5.19 11.53 6.45 10.89 1.46 11.06 5.86 22.72 55.09 17.46 84.78 37.05 19 IG10 Intergenic 0 3.05 19.86 8.78 19.95 20.10 59.50 26.10 10.42 17.86 18.65 1.68 11.52 12.72 6.15 3.76 2.07 4.24 3.44 9.76 27.01 5.28 45.27 14.34 20 IG10_AR6 ActiveIntergenicRegion 0 3.10 2.58 0.78 16.04 5.71 19.38 12.80 2.82 5.97 5.58 0.00 3.75 3.13 4.33 3.77 0.00 0.99 2.96 9.66 10.07 2.94 17.57 13.90 21 IG10_SR5 SilentIntergenicRegion 0 4.06 19.06 9.64 25.46 23.14 68.84 33.53 11.73 23.11 22.29 0.85 12.23 17.97 7.09 4.42 0.96 6.99 4.19 11.41 37.47 7.59 60.20 20.00 22 IG10_AR5 ActiveIntergenicRegion 0 2.59 21.48 5.73 17.30 25.35 80.02 33.52 9.18 18.47 18.00 0.77 9.55 8.90 4.25 3.12 1.08 2.51 2.71 9.99 27.04 5.82 48.42 16.96 23 IG10_SR4 SilentIntergenicRegion 0 5.72 41.36 24.78 47.55 43.80 147.29 46.05 33.99 35.40 39.05 2.18 12.37 13.49 5.70 6.42 1.86 6.69 7.49 20.86 34.48 6.36 116.42 22.94 24 IG10_AR4 ActiveIntergenicRegion 0 2.84 39.70 15.40 23.45 20.83 50.73 21.20 14.39 15.48 24.31 0.86 21.02 17.99 4.23 4.15 2.40 2.72 1.09 9.97 22.51 2.21 43.79 8.07 25 IG10_SR3 SilentIntergenicRegion 0 1.27 5.49 0.00 6.13 7.22 8.07 6.36 1.73 0.25 2.29 0.00 13.42 36.58 1.30 6.09 5.94 0.00 0.00 1.91 4.89 0.00 2.08 0.00 26 IG10_AR3 ActiveIntergenicRegion 0 1.14 6.03 4.87 7.85 4.06 4.18 4.17 1.68 4.30 5.33 4.16 17.44 10.94 3.57 3.02 2.97 0.00 0.00 1.11 9.18 0.76 1.86 0.44 27 IG10_SR2 SilentIntergenicRegion 0 1.12 4.66 7.08 9.13 5.70 6.00 4.39 2.88 9.66 8.68 5.57 21.44 12.68 7.39 1.74 2.90 2.02 1.41 0.49 14.05 1.34 2.45 2.05 28 IG10_AR2 ActiveIntergenicRegion 0 1.73 6.08 2.34 4.97 3.66 6.74 6.05 1.00 6.27 6.39 3.80 3.63 4.95 9.45 2.94 5.63 1.97 4.51 6.07 13.25 3.26 2.55 6.08