Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HEBP2 Gene 0 85.33 65.63 94.46 49.61 59.21 239.78 59.97 59.27 15.36 72.18 83.48 23.49 60.47 134.14 181.40 19.12 15.04 13.72 26.59 65.66 90.25 181.96 105.13 2 448741 Transcript 0 0.00 0.00 0.28 0.00 0.00 0.00 0.00 0.39 0.00 0.00 0.00 0.54 0.00 0.20 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 3 58691 Transcript 0 65.51 79.53 193.40 91.64 137.22 366.09 106.67 122.49 28.37 145.02 146.37 35.11 116.50 255.88 356.14 37.40 27.49 17.76 54.34 124.27 141.69 339.67 199.83 4 367697 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 453452 Transcript 0 3.82 1.19 2.31 2.18 3.65 13.23 4.62 1.27 0.58 2.43 1.33 1.92 0.79 3.78 4.29 1.16 0.00 0.52 0.62 3.00 1.96 6.80 4.02 6 ER1a ExonRegion 0 0.00 0.00 0.55 0.00 0.00 0.00 0.00 0.78 0.00 0.00 0.00 1.08 0.00 0.41 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 7 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 1.53 0.00 0.89 0.00 0.00 14.29 1.96 0.00 0.00 0.24 10.33 0.00 0.00 4.09 8.80 0.41 0.23 2.61 1.32 2.57 4.33 1.80 11.04 9 ER2b ExonRegion 1 11.73 13.74 11.32 4.84 8.52 156.39 17.23 4.67 2.11 13.19 35.33 0.52 10.34 65.91 68.89 11.07 9.25 10.16 13.21 17.33 64.40 34.46 56.93 10 E2a_E3a KnownJunction 1 45.19 51.50 50.41 23.11 28.18 259.40 42.48 22.39 8.80 57.14 87.97 0.00 28.24 184.89 222.14 32.98 25.71 32.54 41.22 53.95 118.43 175.25 115.75 11 ER3a ExonRegion 1 198.42 128.92 174.08 81.14 121.06 564.12 109.22 99.37 26.73 141.29 154.76 11.33 82.59 297.11 351.80 39.23 28.15 36.82 53.92 126.36 250.74 290.65 237.59 12 E3a_E4a KnownJunction 0 463.71 177.67 219.48 113.04 246.18 688.07 253.14 156.25 43.58 201.30 210.53 32.56 184.40 373.71 535.26 30.42 29.64 41.25 73.23 170.59 297.64 342.36 320.45 13 ER4a ExonRegion 1 235.20 167.46 240.91 138.00 153.54 598.95 154.63 161.54 44.23 209.83 241.37 34.91 226.68 396.90 468.07 47.32 31.02 46.84 79.58 186.66 266.37 445.58 288.26 14 E4_Da KnownBoundary 0 237.08 164.84 368.70 188.69 112.73 531.51 132.93 195.88 45.63 239.69 242.06 43.81 140.74 374.83 422.03 56.91 34.97 55.34 81.13 258.42 218.01 471.50 240.38 15 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 16 E4a_E6a KnownJunction 0 0.00 2.76 13.48 31.93 4.07 71.72 15.94 20.74 0.00 10.34 10.16 0.00 0.00 14.01 8.90 0.00 4.68 0.00 9.60 11.95 6.30 20.27 6.40 17 ER4b ExonRegion 0 121.81 133.10 295.53 137.34 119.30 463.59 123.96 173.24 42.25 213.65 226.41 62.26 159.10 348.51 477.62 59.67 33.71 30.66 70.21 192.10 229.24 504.64 288.91 18 E4_Db NovelBoundary 1 3.63 2.43 3.67 6.66 7.89 13.17 9.41 4.15 4.77 4.46 2.11 0.00 33.93 14.95 13.35 13.07 0.00 7.13 8.94 14.13 17.24 24.13 4.35 19 E4b_E6a KnownJunction 0 73.20 105.51 283.79 137.58 292.36 620.38 194.10 194.24 42.85 221.15 202.37 43.06 190.41 415.04 581.99 52.12 48.53 20.02 91.48 178.14 191.51 512.59 299.54 20 I4 Intron 0 26.40 7.86 4.84 13.16 10.29 41.37 15.21 8.03 2.34 11.04 8.45 5.84 17.94 16.68 17.22 2.61 2.53 2.18 2.86 13.03 10.29 19.26 16.01 21 I4_SR1 SilentIntronRegion 0 18.19 6.35 3.14 9.83 7.31 31.01 12.46 6.34 2.52 10.34 7.93 6.27 17.32 17.57 15.11 3.95 2.58 3.05 2.61 14.87 11.79 14.81 17.43 22 I4_AR1 ActiveIntronRegion 0 18.32 8.60 2.24 12.41 11.05 48.97 18.82 8.30 2.61 9.43 6.45 1.30 13.25 18.96 10.62 0.42 1.20 2.16 1.67 9.07 7.54 16.35 18.16 23 I4_SR2 SilentIntronRegion 0 40.60 9.54 8.17 17.86 13.89 51.82 17.31 10.16 2.00 12.67 9.99 7.20 20.77 14.60 22.79 1.79 3.03 1.06 3.68 12.34 9.51 26.35 13.31 24 E5_Aa NovelBoundary 0 34.01 15.46 8.04 20.84 60.70 90.00 20.36 10.97 0.00 4.08 7.74 0.00 0.00 28.67 45.24 0.00 0.00 1.82 4.80 15.72 5.37 10.53 12.98 25 ER5a ExonRegion 0 7.82 3.58 5.11 6.55 7.64 33.90 13.87 3.80 0.16 4.06 3.99 5.77 2.37 8.86 12.87 3.47 0.00 1.55 1.87 6.07 5.89 12.81 12.05 26 E5_Da NovelBoundary 0 7.48 0.00 13.63 11.09 8.15 66.61 4.02 11.58 0.00 6.77 10.16 13.95 6.17 13.89 30.04 15.81 0.00 1.53 9.60 11.44 13.04 19.84 12.04 27 E5a_E6a KnownJunction 0 3.63 0.00 1.83 0.00 3.31 5.79 0.00 0.00 0.00 3.22 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 2.94 0.00 5.02 0.00 28 I5_AR1 ActiveIntronRegion 0 13.71 7.41 1.48 5.75 6.50 48.25 6.43 3.13 0.00 2.08 4.69 1.44 5.32 9.98 11.74 1.20 0.00 0.00 0.00 5.17 4.44 7.59 4.75 29 E6_Aa NovelBoundary 0 10.45 3.35 4.64 17.28 7.72 75.58 10.33 7.27 2.86 8.38 4.16 6.45 6.82 5.42 25.59 0.00 0.00 1.91 0.00 15.15 0.00 5.94 4.35 30 ER6a ExonRegion 0 188.73 138.39 171.14 99.29 124.88 324.15 116.65 117.72 30.01 120.42 126.55 67.26 117.05 171.51 293.98 20.22 25.33 10.17 35.56 103.95 67.59 365.10 120.26 31 ER6b ExonRegion 0 3.68 7.71 3.10 0.72 0.00 1.93 4.11 0.73 2.15 2.60 3.56 17.55 2.22 9.15 25.65 2.97 3.30 0.00 1.17 3.36 0.00 25.33 3.25 32 IG40 Intergenic 0 26.64 13.45 12.15 11.46 16.81 37.43 10.50 7.48 1.82 14.05 3.98 1.14 4.26 8.32 14.42 0.67 0.41 1.23 1.51 9.73 3.95 13.09 11.19 33 IG40_AR1 ActiveIntergenicRegion 0 11.40 1.58 4.63 2.12 6.75 8.92 6.35 2.35 1.43 4.99 5.27 6.15 9.51 16.42 37.87 0.58 0.64 0.00 1.24 6.21 2.57 34.86 11.11 34 IG40_AR2 ActiveIntergenicRegion 0 47.85 23.26 20.72 20.91 30.48 66.29 17.23 13.65 3.06 25.31 6.10 1.05 5.06 10.93 18.33 1.30 0.58 2.14 2.37 13.61 5.98 15.43 17.11