Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 L3MBTL3 Gene 0 42.00 21.74 27.09 18.57 41.54 8.89 26.67 19.09 16.48 24.64 81.50 72.90 29.80 53.98 32.89 53.30 38.50 12.33 1.93 18.73 12.35 47.66 33.35 2 361794 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 368139 Transcript 1 20.67 33.09 15.79 7.56 0.00 5.11 16.74 4.48 11.75 11.44 75.86 73.52 15.10 55.45 14.96 46.91 22.07 8.71 0.00 26.65 8.71 18.68 16.48 4 368136 Transcript 0 0.37 0.36 0.32 0.00 0.00 0.57 0.00 0.00 0.00 0.00 0.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.75 1.15 1.22 1.67 5 ER1a ExonRegion 1 54.08 26.54 10.24 5.09 59.92 4.61 50.64 14.56 7.96 16.12 58.14 3.13 2.47 31.41 19.09 80.09 67.19 8.24 6.41 30.91 7.77 20.12 87.75 6 E1a_E3a KnownJunction 0 26.67 0.00 20.11 10.55 35.91 4.71 22.70 29.98 12.50 29.68 31.74 5.85 6.82 17.25 4.45 38.62 8.60 13.85 0.00 12.08 5.50 19.90 27.74 7 ER2a ExonRegion 0 1.11 1.07 0.96 0.00 0.00 1.70 0.00 0.00 0.00 0.00 2.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.41 0.54 1.09 8 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.03 3.12 3.93 9 ER3a ExonRegion 0 17.53 1.04 8.90 9.54 11.71 0.86 10.92 13.86 8.02 13.59 33.66 27.37 16.90 18.20 5.53 34.43 26.53 7.29 0.00 10.04 7.07 14.07 20.17 10 E3_Da NovelBoundary 0 23.41 2.89 3.96 8.42 0.00 0.00 3.84 0.00 9.37 8.70 34.80 29.41 26.46 14.24 4.45 14.53 36.65 2.45 0.00 10.61 8.59 0.00 16.39 11 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E3b_E4a KnownJunction 0 18.37 12.63 5.47 12.02 3.31 0.00 2.21 22.88 13.77 23.50 68.28 38.26 19.48 24.43 25.59 25.29 72.56 1.58 0.00 30.10 8.28 16.41 12.21 13 ER3b ExonRegion 1 14.73 6.73 4.19 9.70 2.37 0.00 3.00 15.62 11.40 14.38 43.86 33.30 17.86 19.74 13.06 10.06 38.72 1.85 0.00 21.11 8.48 9.30 17.39 14 ER4a ExonRegion 0 14.31 5.25 19.66 14.50 17.02 4.22 12.40 21.97 22.02 25.15 109.46 59.84 20.56 56.77 29.81 84.08 61.39 17.02 11.11 38.81 18.57 57.09 75.42 15 E4a_E5a KnownJunction 0 23.26 8.35 29.42 9.42 82.00 13.17 21.82 12.94 9.06 15.58 104.82 36.61 19.97 58.57 13.35 44.09 56.47 14.26 0.00 37.52 16.12 44.33 48.23 16 ER5a ExonRegion 0 23.98 20.01 27.81 19.17 59.44 10.99 49.16 9.48 17.21 20.91 111.16 90.07 33.21 61.63 38.60 66.87 49.72 15.59 1.31 23.59 19.77 42.79 31.36 17 E5a_E6a KnownJunction 0 3.26 3.03 12.42 15.35 0.00 0.00 3.36 0.00 4.57 12.52 45.96 17.86 19.97 12.18 4.45 15.55 4.02 11.03 3.58 18.54 11.31 30.80 22.37 18 E5a_E7a KnownJunction 0 20.67 33.09 15.79 7.56 0.00 5.11 16.74 4.48 11.75 11.44 75.86 73.52 15.10 55.45 14.96 46.91 22.07 8.71 0.00 26.65 8.71 18.68 16.48 19 ER6a ExonRegion 0 3.08 3.61 16.44 6.38 8.74 1.49 2.86 3.36 2.50 11.09 33.04 31.40 21.32 17.67 9.17 16.21 18.09 7.61 0.21 14.81 16.37 16.64 17.38 20 E6a_E7a KnownJunction 0 0.00 2.83 17.68 4.79 4.16 0.00 1.94 1.60 1.59 12.71 25.64 24.46 13.96 24.02 14.09 4.10 16.08 3.15 0.00 2.56 14.09 10.90 8.02 21 ER7a ExonRegion 0 30.05 16.26 26.35 17.86 20.89 6.11 12.63 12.95 15.86 20.60 102.09 73.03 32.60 69.57 34.27 60.87 43.20 13.55 0.00 25.86 19.56 47.18 34.67 22 E7_Da NovelBoundary 0 11.34 2.70 15.11 0.00 3.99 2.61 2.08 0.00 1.79 2.85 11.90 12.60 6.17 0.00 6.30 8.20 8.60 7.71 0.00 3.26 0.00 0.00 3.76 23 E7a_E8a KnownJunction 0 56.23 22.50 23.12 22.61 63.58 21.69 31.09 8.67 18.46 18.75 71.91 60.02 65.58 103.13 37.70 70.75 59.84 9.33 0.00 19.81 16.80 24.43 32.86 24 I7 Intron 0 11.20 2.55 4.26 3.74 5.88 0.66 6.24 3.23 3.55 2.45 9.45 5.76 4.06 5.10 4.07 6.80 4.74 2.06 0.00 3.53 0.79 5.79 4.87 25 I7_SR1 SilentIntronRegion 0 11.22 2.56 4.27 3.74 5.89 0.66 6.25 3.24 3.56 2.46 9.47 5.77 4.07 5.11 4.08 6.81 4.75 2.06 0.00 3.54 0.79 5.80 4.88 26 E8_Aa NovelBoundary 0 68.23 16.64 15.61 15.32 8.57 0.00 20.89 4.27 4.48 5.69 24.85 12.60 14.28 14.77 14.71 7.78 8.70 0.00 0.00 9.14 0.00 2.51 7.60 27 ER8a ExonRegion 0 27.39 24.07 28.97 15.43 28.37 10.75 21.87 13.23 19.46 21.98 101.28 96.19 41.65 89.73 40.81 64.54 57.03 17.25 0.77 19.55 17.25 55.17 35.90 28 E8a_E9a KnownJunction 0 27.71 26.51 47.78 23.71 19.78 2.90 8.39 19.43 22.11 20.87 94.50 101.28 38.80 75.81 33.62 57.42 63.58 13.89 4.71 24.22 30.33 49.05 47.29 29 I8_AR1 ActiveIntronRegion 0 11.40 18.50 0.62 0.53 10.28 2.52 10.30 0.00 0.00 1.08 0.00 0.00 1.98 0.00 0.00 1.36 0.00 0.00 0.00 0.79 1.17 0.00 1.34 30 E9_Aa NovelBoundary 0 21.78 24.80 0.00 0.00 35.65 0.00 25.22 6.57 0.00 11.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.82 0.00 0.00 0.00 0.00 4.35 31 ER9a ExonRegion 0 31.25 35.07 25.49 19.69 25.28 8.09 23.77 17.12 13.60 26.47 103.29 80.83 37.41 94.89 27.99 65.39 44.85 14.52 0.71 25.06 23.02 50.25 35.00 32 E9a_E10a KnownJunction 0 24.30 32.43 21.94 9.92 44.99 4.32 8.83 17.83 11.55 31.16 84.60 61.82 41.88 67.04 20.89 49.13 64.24 22.18 0.00 22.95 20.32 81.62 49.17 33 ER10a ExonRegion 0 22.61 35.39 28.00 15.23 32.78 12.98 23.89 12.70 16.19 29.92 86.75 112.00 29.06 85.35 27.75 79.96 46.46 22.78 3.53 24.03 24.43 54.04 60.90 34 E10a_E11a KnownJunction 0 23.71 33.35 25.99 26.70 43.46 4.32 59.53 13.18 23.90 32.07 100.97 136.54 40.91 71.87 41.04 126.98 49.65 39.09 0.00 34.32 11.06 46.11 59.16 35 ER11a ExonRegion 0 35.60 49.85 21.20 24.75 44.42 8.85 27.27 11.56 19.26 38.61 103.11 95.12 36.14 100.00 31.25 98.14 54.39 30.69 0.79 27.96 23.17 51.93 53.22 36 E11a_E12a KnownJunction 1 41.19 40.65 22.83 18.38 26.49 21.81 12.90 11.87 26.65 40.53 79.97 91.68 6.49 77.29 19.04 99.12 50.58 12.81 4.80 15.34 24.15 35.88 52.24 37 ER12a ExonRegion 0 35.03 34.81 16.11 22.78 41.51 12.57 26.02 12.25 21.05 30.77 105.36 79.84 21.83 82.73 26.50 82.26 53.91 25.88 0.59 35.18 18.73 46.14 61.02 38 E12a_E13a KnownJunction 1 37.34 58.81 10.17 10.12 70.71 5.17 27.43 22.39 12.70 33.68 124.77 92.88 27.27 101.42 10.75 60.24 42.92 20.56 0.00 18.22 14.89 65.58 78.70 39 ER13a ExonRegion 0 44.47 29.09 11.40 12.00 76.26 8.29 30.11 12.10 18.26 31.29 120.79 119.44 47.97 92.06 31.72 101.99 59.77 20.65 0.00 28.93 9.65 77.18 49.48 40 E13a_E14a KnownJunction 0 60.31 24.21 10.41 21.61 82.94 9.09 52.47 21.11 23.58 19.37 101.45 119.44 40.91 118.02 42.03 117.92 45.63 25.16 0.00 53.56 16.80 79.11 60.61 41 ER14a ExonRegion 0 34.99 25.63 23.75 17.93 40.73 13.92 25.10 20.92 15.37 29.91 134.54 127.80 33.94 78.25 33.98 69.55 67.19 11.28 0.00 30.52 16.57 81.82 43.51 42 E14a_E15a KnownJunction 0 42.45 27.50 25.07 22.77 45.16 12.49 28.57 32.65 20.98 23.85 123.93 179.61 87.17 90.82 54.02 76.39 51.43 17.78 0.00 34.32 17.30 84.44 27.15 43 ER15a ExonRegion 0 58.55 32.35 32.80 22.00 51.95 13.69 28.66 30.06 21.91 34.85 161.84 167.50 80.77 92.22 41.94 98.39 68.85 13.82 3.31 39.96 12.36 103.82 50.00 44 E15a_E16a KnownJunction 0 65.57 15.92 32.11 21.51 84.04 11.92 36.13 16.31 22.02 47.33 137.77 125.89 40.74 78.11 48.46 85.96 52.92 5.02 4.80 19.94 14.52 102.63 37.13 45 ER16a ExonRegion 0 36.47 39.61 32.09 17.59 79.56 8.02 47.89 18.49 14.95 36.94 156.16 177.66 36.54 67.46 41.22 87.33 55.85 9.30 4.59 18.93 10.63 84.94 35.51 46 E16a_E17a KnownJunction 1 53.19 24.47 31.67 26.37 82.26 5.79 49.29 35.49 16.72 36.96 118.14 240.23 49.67 55.62 42.77 81.35 57.22 8.87 0.00 26.21 19.83 63.13 31.84 47 ER17a ExonRegion 0 46.98 24.75 38.80 26.15 41.85 13.73 35.88 25.77 18.35 31.28 124.98 164.29 85.90 65.04 32.36 86.25 57.96 17.63 6.06 20.66 15.84 81.54 50.29 48 E17a_E18a KnownJunction 0 55.19 41.05 44.85 19.01 30.05 8.06 34.76 19.02 18.26 35.19 127.45 149.45 99.83 75.81 65.15 106.13 72.18 22.30 13.74 18.92 26.01 76.48 46.52 49 ER18a ExonRegion 0 55.23 28.51 35.27 26.18 57.05 17.46 42.60 28.08 11.96 37.95 154.85 142.76 53.59 76.91 34.97 99.84 72.39 26.46 1.33 19.81 24.76 72.49 52.30 50 E18a_E19a KnownJunction 0 38.15 16.90 26.88 14.75 56.54 28.79 53.00 29.16 25.93 43.27 128.30 61.67 110.71 78.29 41.41 115.70 62.65 47.34 0.00 43.78 26.32 79.11 64.79 51 ER19a ExonRegion 0 54.45 31.25 32.20 16.10 47.64 20.15 36.87 21.71 18.01 34.90 125.90 99.16 59.29 91.77 47.91 106.82 65.76 29.80 3.03 25.24 21.55 58.99 47.87 52 E19a_E20a KnownJunction 0 87.79 31.97 24.10 18.38 15.96 14.99 26.50 29.94 21.85 36.88 138.03 124.39 54.05 99.30 55.38 96.21 81.16 16.37 0.00 13.74 29.53 45.99 54.63 53 ER20a ExonRegion 0 58.64 27.48 29.95 26.58 38.87 11.00 28.99 31.76 22.40 39.71 138.72 90.08 38.33 99.21 47.85 116.71 70.46 33.00 1.08 28.96 24.34 73.33 62.94 54 E20a_E21a KnownJunction 0 54.68 38.15 37.11 24.71 66.47 12.61 66.86 35.49 27.11 41.37 133.03 55.52 33.28 77.17 51.18 83.23 79.38 18.53 0.00 20.39 16.68 58.54 45.67 55 ER21a ExonRegion 0 48.60 38.03 39.20 30.39 66.69 26.70 63.98 36.99 20.07 38.34 129.48 100.50 32.42 101.04 65.57 100.38 55.37 29.49 0.52 21.06 23.11 56.52 57.48 56 E21a_E22a KnownJunction 0 107.50 41.24 47.81 37.69 105.94 58.38 66.91 43.17 23.81 38.33 182.31 136.69 34.74 108.19 64.40 140.82 78.35 40.46 4.14 44.10 35.77 106.12 94.41 57 E22_Aa NovelBoundary 0 24.23 0.00 0.00 0.00 6.45 2.33 7.77 1.77 1.79 0.00 0.00 6.30 0.00 0.00 0.00 4.27 4.68 3.98 0.00 0.00 0.00 2.88 0.00 58 ER22a ExonRegion 0 35.11 23.73 45.94 29.12 25.28 10.33 22.21 31.51 25.30 33.52 121.52 98.86 31.01 78.59 60.19 92.82 55.03 21.37 4.53 29.14 28.75 56.90 60.29 59 E22_Da NovelBoundary 0 34.67 0.00 0.00 0.00 7.05 2.44 2.21 8.09 2.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.35 3.12 0.00 60 E22a_E23a KnownJunction 1 30.15 5.79 51.03 15.35 22.67 8.23 29.37 27.85 26.10 36.42 151.14 117.64 0.00 75.99 69.72 29.82 101.54 16.91 0.00 28.25 31.44 45.07 48.66 61 ER23a ExonRegion 0 31.48 11.56 27.78 15.21 54.92 9.81 36.21 27.24 19.43 30.31 108.67 78.14 39.08 70.43 39.05 35.48 47.10 12.70 3.64 21.85 10.63 50.24 31.70 62 E23a_E24a KnownJunction 0 61.27 21.05 18.60 23.97 96.10 10.16 68.76 23.70 26.97 41.13 86.18 114.19 27.43 98.83 43.27 33.32 25.81 8.58 4.80 20.84 0.00 76.42 51.30 63 ER24a ExonRegion 0 51.25 17.62 28.54 18.42 44.94 6.81 25.26 19.25 16.06 20.00 44.96 44.74 21.06 28.88 30.32 21.21 18.27 4.24 1.47 9.92 4.61 36.57 15.09