Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KPNA5 Gene 0 35.19 136.77 31.98 121.62 76.80 95.93 83.03 59.22 65.21 55.52 23.90 60.63 48.09 23.67 21.39 17.11 20.18 21.72 18.48 54.26 9.02 47.81 21.11 2 413340 Transcript 0 0.00 1.22 0.29 1.30 1.71 0.29 0.42 1.37 1.04 2.01 5.88 0.00 0.00 2.47 0.66 0.48 10.83 3.41 0.51 4.35 0.71 2.37 1.36 3 368564 Transcript 0 45.21 201.14 46.28 171.69 103.75 110.81 99.24 80.26 77.55 73.11 12.66 59.20 47.62 18.25 22.98 12.80 11.91 15.44 18.42 53.32 4.23 53.75 16.92 4 356348 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 392517 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 2.59 2.26 0.00 0.00 5.95 2.75 2.43 0.00 1.24 0.00 2.68 0.00 0.00 0.99 4.03 0.00 4.40 2.46 0.00 0.83 1.84 1.39 9.14 7 ER1b ExonRegion 0 16.57 21.58 0.00 6.81 19.59 46.80 29.11 4.02 6.34 1.36 9.33 0.00 1.47 19.21 15.61 6.12 19.73 13.42 13.45 15.32 14.60 9.89 18.04 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.74 0.00 0.00 2.94 0.00 0.00 0.00 9 E1a_E3a KnownJunction 0 0.00 15.33 0.00 11.09 0.00 15.10 15.28 7.06 23.38 6.50 14.79 0.00 0.00 17.48 4.45 4.36 17.11 15.84 17.98 5.88 5.87 5.94 3.41 10 E2_Aa NovelBoundary 0 0.00 0.00 8.07 8.02 0.00 0.00 12.67 13.51 10.07 7.87 0.00 0.00 0.00 2.41 18.42 4.36 0.00 9.99 17.04 8.18 0.00 3.12 10.76 11 ER2a ExonRegion 1 0.00 0.71 0.88 3.90 5.12 0.88 1.27 1.70 1.34 3.12 3.37 0.00 0.00 2.47 1.97 1.43 11.83 3.73 1.53 6.84 2.12 1.12 4.07 12 E2_Da NovelBoundary 0 0.00 5.92 1.45 9.82 11.97 13.40 7.46 11.46 14.90 6.82 0.00 0.00 8.28 2.47 0.00 20.34 0.00 15.01 4.24 8.25 6.12 0.00 7.51 13 E2a_E3a KnownJunction 0 0.00 2.96 0.00 0.00 0.00 0.00 0.00 2.42 0.00 2.93 14.27 0.00 0.00 4.94 0.00 0.00 16.92 6.51 0.00 3.26 0.00 6.00 0.00 14 ER3a ExonRegion 0 8.64 22.64 11.34 44.56 33.53 32.47 26.13 20.92 39.04 20.91 33.96 43.68 39.45 33.72 24.10 24.26 45.55 55.07 24.60 61.50 18.16 28.84 40.76 15 E3a_E4a KnownJunction 0 3.78 29.53 8.66 100.42 112.31 113.00 26.14 34.26 53.53 22.59 31.01 80.58 59.41 11.89 30.90 28.71 8.79 93.85 41.60 76.89 3.15 25.53 35.68 16 ER4a ExonRegion 0 8.24 47.61 14.92 81.65 57.90 135.14 78.11 22.00 58.52 32.78 41.16 58.07 50.21 20.87 19.71 16.00 29.61 44.53 20.11 71.59 7.00 45.47 16.76 17 E4a_E5a KnownJunction 0 6.96 77.42 21.58 53.77 4.33 119.76 70.97 27.56 52.29 32.72 35.06 55.52 60.71 12.71 15.20 12.99 24.78 25.20 8.75 57.46 8.90 48.74 8.71 18 ER5a ExonRegion 0 22.54 52.38 18.56 93.45 20.60 59.58 57.42 23.06 71.11 36.70 45.19 133.17 64.16 24.43 19.76 23.12 25.22 31.65 23.64 88.57 8.81 52.94 26.61 19 E5_Da NovelBoundary 0 0.00 5.79 0.00 3.76 0.00 0.00 4.02 4.03 1.62 1.42 0.00 0.00 25.49 0.00 0.00 0.00 0.00 0.00 0.00 9.08 0.00 0.00 0.00 20 E5a_E6a KnownJunction 1 45.71 60.52 17.18 80.18 60.10 87.11 63.59 26.78 76.65 36.69 31.59 86.13 80.03 52.74 4.45 39.14 20.66 33.62 27.29 86.74 14.52 51.37 27.66 21 ER6a ExonRegion 1 15.39 52.36 12.86 52.78 43.12 64.88 73.10 28.75 62.15 31.67 56.50 83.72 63.69 37.37 11.79 25.50 35.58 37.19 21.09 79.06 8.86 54.48 19.38 22 E6a_E7a KnownJunction 0 20.08 85.77 9.64 59.73 12.05 56.05 104.97 33.52 88.43 27.08 81.28 125.29 60.22 36.26 22.99 42.04 21.51 40.67 21.37 100.80 8.34 37.84 19.80 23 ER7a ExonRegion 0 15.59 54.29 16.72 57.49 22.12 89.29 70.32 35.79 65.48 26.73 56.79 127.06 74.97 43.19 23.23 27.22 38.31 33.85 21.50 64.76 14.49 49.97 23.94 24 E7_Da NovelBoundary 0 3.33 0.00 3.37 15.15 3.74 8.40 19.83 1.77 5.32 0.00 0.00 0.00 0.00 2.24 0.00 0.00 13.46 0.00 0.00 11.25 2.97 3.00 0.00 25 E7a_E8a KnownJunction 0 9.33 36.11 13.93 62.13 25.04 72.00 66.46 20.50 53.30 14.16 38.64 47.12 49.19 24.31 5.19 15.55 25.53 17.74 17.79 65.00 13.04 43.05 20.06 26 ER8a ExonRegion 0 15.39 47.09 15.94 74.99 34.60 79.35 62.42 35.07 63.74 24.99 55.73 55.70 54.75 34.38 14.77 34.86 30.78 46.05 28.49 73.89 18.35 53.63 32.90 27 E8_Da NovelBoundary 0 0.00 0.00 1.77 12.69 11.97 2.90 5.70 2.55 1.22 3.33 0.00 6.30 21.91 7.42 0.00 3.42 0.00 0.00 0.00 17.77 3.15 6.06 0.00 28 E8a_E9a KnownJunction 0 27.71 42.16 17.00 66.76 25.89 122.54 69.42 32.12 57.61 29.31 31.80 30.61 63.47 30.26 29.67 27.77 36.56 47.46 20.71 61.17 16.12 28.35 42.77 29 E9_Aa NovelBoundary 0 25.93 33.68 4.52 7.59 3.57 2.21 17.22 11.05 8.13 18.53 5.00 19.36 13.31 14.42 20.40 0.00 8.70 2.45 4.42 12.46 2.90 5.39 0.00 30 ER9a ExonRegion 0 24.53 58.36 7.71 64.53 30.02 99.39 80.66 37.89 59.40 28.75 41.29 59.31 65.43 39.19 18.57 41.13 41.23 67.55 29.34 61.23 22.37 47.61 48.75 31 E9a_E10a KnownJunction 0 52.08 88.54 6.65 67.36 31.32 131.63 121.67 33.39 51.21 37.58 33.11 74.87 46.91 48.03 18.54 52.81 57.32 63.88 22.59 60.72 28.73 63.87 36.45 32 ER10a ExonRegion 1 23.59 49.00 5.80 59.73 33.71 113.84 75.47 43.69 60.51 46.23 47.32 75.29 64.80 53.14 20.80 42.28 40.78 62.24 32.09 74.01 31.44 47.41 46.93 33 E10_Da NovelBoundary 1 17.93 3.22 8.96 16.71 4.33 2.90 38.69 4.44 12.01 8.35 0.00 6.30 0.00 0.00 0.00 0.00 35.81 15.71 4.80 21.09 6.30 3.12 3.84 34 E10a_E11a KnownJunction 0 21.34 48.94 7.45 35.06 26.74 102.50 38.95 44.20 44.59 46.79 45.49 62.42 40.42 69.40 13.35 24.52 30.39 24.71 4.80 88.53 13.41 59.15 59.41 35 I10 Intron 0 3.50 3.85 1.51 7.44 4.27 3.03 20.26 5.02 6.09 7.37 2.97 9.62 9.34 6.36 1.95 5.97 3.32 7.07 4.33 7.54 3.91 4.31 3.47 36 I10_SR1 SilentIntronRegion 0 3.51 3.85 1.51 7.46 4.28 3.04 20.31 5.03 6.11 7.39 2.98 9.64 9.36 6.37 1.96 5.99 3.32 7.08 4.34 7.56 3.92 4.32 3.48 37 ER11a ExonRegion 1 23.39 67.47 6.06 47.44 30.86 94.20 52.64 39.23 50.59 45.66 54.68 101.33 45.18 54.34 16.12 29.76 28.50 40.00 17.14 68.19 22.12 36.05 42.56 38 E11_Da NovelBoundary 0 0.00 5.92 0.00 1.50 0.00 2.84 55.03 4.31 5.64 8.14 11.48 13.95 14.45 4.77 0.00 0.00 0.00 4.52 0.00 14.45 2.66 2.33 3.76 39 E11a_E12a KnownJunction 0 27.71 84.20 2.54 79.18 44.57 121.69 76.75 40.83 60.44 58.45 73.18 74.57 66.07 43.20 14.09 20.59 37.31 39.34 18.82 58.04 18.04 46.78 28.85 40 I11 Intron 0 5.25 5.33 2.18 6.87 5.87 3.58 30.36 5.65 6.67 6.19 5.34 11.77 16.67 4.27 1.20 5.24 7.08 5.93 2.88 12.17 1.05 8.24 3.64 41 I11_SR1 SilentIntronRegion 0 6.35 6.07 1.68 7.47 5.04 3.61 27.01 6.40 4.33 5.52 6.07 12.42 12.70 3.97 1.19 4.22 5.63 7.62 4.15 11.28 1.74 7.84 4.54 42 I11_AR1 ActiveIntronRegion 0 4.26 4.74 2.65 6.42 6.75 3.62 33.96 5.05 8.98 6.92 4.73 11.32 20.72 4.63 1.23 6.25 8.55 4.45 1.75 13.22 0.41 8.78 2.86 43 E12_Aa NovelBoundary 0 3.04 11.18 6.92 8.42 19.61 0.00 48.31 2.55 7.41 2.69 6.63 6.30 13.15 4.94 4.45 0.00 0.00 8.08 7.15 20.26 2.78 16.53 3.24 44 ER12a ExonRegion 0 33.53 81.15 9.60 63.58 66.87 118.13 101.09 35.80 60.54 49.87 46.36 66.63 61.23 37.05 21.39 29.11 47.29 31.88 19.59 76.16 21.55 54.39 39.48 45 E12_Da NovelBoundary 0 0.00 0.00 5.47 14.15 3.90 0.00 35.33 0.00 1.77 4.89 2.42 0.00 6.33 0.00 0.00 0.00 9.16 4.81 4.24 8.63 3.15 3.12 0.00 46 E12a_E13a KnownJunction 0 38.38 86.83 10.47 85.04 73.09 114.88 91.28 39.02 67.56 38.84 52.86 106.68 93.83 34.38 17.68 22.64 29.27 23.88 30.12 97.35 13.59 75.87 43.28 47 E13_Aa NovelBoundary 0 3.19 3.03 12.80 1.93 0.00 2.21 50.30 2.46 6.48 3.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 3.26 0.00 3.12 0.00 48 ER13a ExonRegion 0 40.40 72.78 23.64 71.78 60.25 124.08 112.95 43.35 64.07 47.44 53.85 105.06 72.15 40.59 21.69 30.79 48.25 32.68 22.50 79.67 26.79 64.31 33.47 49 E13_Da NovelBoundary 0 0.00 2.63 0.00 3.00 3.23 7.67 63.37 6.74 11.02 4.27 0.00 12.45 13.64 2.94 0.00 0.00 0.00 6.55 0.00 2.68 0.00 8.33 4.35 50 E13a_E14a KnownJunction 0 48.08 82.55 21.76 75.22 97.62 180.92 110.14 51.84 49.31 29.98 58.23 106.53 66.07 21.54 19.28 43.41 20.10 27.65 15.53 74.72 19.21 60.62 48.14 51 I13 Intron 0 3.61 5.16 1.25 6.58 7.63 5.81 24.33 3.64 6.73 6.29 2.35 8.32 12.13 3.88 1.41 2.68 3.14 3.59 1.55 7.52 0.64 4.21 1.86 52 I13_SR1 SilentIntronRegion 0 3.62 5.16 1.25 6.59 7.64 5.82 24.36 3.65 6.74 6.30 2.36 8.33 12.14 3.89 1.42 2.68 3.14 3.60 1.55 7.53 0.64 4.22 1.86 53 E14_Aa NovelBoundary 0 6.59 15.52 3.55 7.29 21.99 16.30 48.49 10.19 13.22 9.24 2.68 6.00 42.85 17.42 4.45 3.16 0.00 9.37 3.76 14.13 0.00 2.88 3.59 54 ER14a ExonRegion 0 41.61 73.82 20.58 68.48 76.77 108.15 89.59 49.01 80.01 48.23 76.30 83.76 86.96 43.43 33.96 36.28 44.35 37.32 27.17 84.99 23.88 61.26 35.73 55 E14_Da NovelBoundary 0 6.59 19.27 0.00 20.51 7.89 28.00 64.79 14.99 34.00 14.00 7.95 7.65 14.12 6.71 0.00 0.00 0.00 18.65 3.95 8.69 5.62 15.06 10.76 56 E14a_E15a KnownJunction 0 38.90 38.81 13.66 40.52 70.80 110.73 71.50 40.25 70.95 43.19 51.54 76.83 53.08 46.27 24.72 24.44 43.10 26.82 16.47 61.36 13.34 36.37 44.99 57 I14 Intron 0 6.42 9.76 1.78 15.40 16.90 13.04 28.82 7.72 13.22 9.00 1.67 8.41 15.50 2.99 2.06 5.69 3.69 5.52 3.33 13.67 1.19 9.70 3.82 58 I14_SR1 SilentIntronRegion 0 6.43 9.78 1.78 15.42 16.92 13.06 28.86 7.73 13.24 9.02 1.68 8.42 15.52 3.00 2.06 5.69 3.70 5.53 3.34 13.69 1.19 9.72 3.82 59 ER15a ExonRegion 0 30.59 62.34 18.37 69.10 67.70 106.12 84.19 49.56 71.29 52.99 51.71 81.16 70.51 47.19 31.63 28.75 42.93 23.29 19.22 64.72 21.70 55.90 31.48 60 E15_Da KnownBoundary 0 17.78 60.52 13.13 74.52 76.91 53.21 92.39 41.28 49.04 41.69 30.53 62.27 39.61 34.79 14.71 4.36 21.60 11.65 12.99 84.56 19.83 45.68 19.55 61 E15a_E16a KnownJunction 1 34.90 5.72 10.76 9.06 11.63 20.10 7.86 25.75 14.84 9.11 20.69 52.07 0.00 2.30 4.45 12.56 12.53 0.00 4.80 6.46 6.05 14.33 4.10 62 ER15b ExonRegion 0 45.21 201.14 46.28 171.69 103.75 110.81 99.24 80.26 77.55 73.11 12.66 59.20 47.62 18.25 22.98 12.80 11.91 15.44 18.42 53.32 4.23 53.75 16.92 63 E16_Aa NovelBoundary 0 22.30 14.87 4.82 4.10 3.82 0.00 8.61 4.89 4.46 3.09 2.58 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 9.72 0.00 5.14 0.00 64 ER16a ExonRegion 0 10.67 5.59 4.99 9.62 12.14 9.81 15.71 8.39 5.85 6.84 10.88 16.91 10.21 5.25 8.32 4.49 8.78 0.65 2.90 8.94 2.83 9.12 5.95 65 IG47 Intergenic 0 3.83 0.66 3.77 12.72 3.84 6.37 41.62 2.74 5.29 16.11 0.00 0.25 1.00 0.11 0.07 0.14 0.00 0.09 1.03 3.33 0.75 2.59 1.23 66 IG47_SR1 SilentIntergenicRegion 0 2.47 0.72 4.21 14.47 3.12 6.26 34.98 3.28 4.74 15.56 0.00 0.33 1.47 0.19 0.11 0.24 0.00 0.10 1.04 3.17 0.36 1.36 1.19 67 IG47_AR1 ActiveIntergenicRegion 0 11.94 1.67 6.01 14.56 6.29 7.33 54.62 2.43 7.79 19.07 0.00 0.00 0.91 0.00 0.00 0.00 0.00 0.00 1.12 3.25 0.52 5.39 1.04 68 IG47_SR2 SilentIntergenicRegion 0 2.69 0.00 1.66 7.87 4.21 6.11 49.80 1.72 5.24 15.84 0.00 0.19 0.00 0.00 0.00 0.00 0.00 0.11 0.96 3.74 1.74 3.91 1.42