Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SMPD2 Gene 0 28.89 8.70 26.54 24.33 13.42 19.78 9.99 14.48 10.25 12.99 35.97 15.82 21.80 46.70 61.77 45.23 42.71 14.39 34.36 14.82 18.58 27.12 25.73 2 258052 Transcript 0 35.17 7.47 33.56 23.80 18.03 20.49 12.70 18.55 11.86 15.23 48.87 19.63 27.68 64.04 75.58 53.15 52.25 16.47 36.61 16.12 20.09 29.43 22.76 3 439615 Transcript 0 7.08 1.31 9.99 8.06 3.41 9.61 3.04 5.48 5.95 3.44 3.56 0.27 2.19 3.09 3.25 3.03 2.84 6.57 9.56 3.10 7.51 2.72 3.86 4 458487 Transcript 0 19.62 4.61 16.93 9.23 5.60 19.13 4.24 2.19 7.94 8.52 5.72 3.51 5.80 17.38 19.08 7.58 4.50 19.79 16.03 6.72 4.22 6.92 9.80 5 ER1a ExonRegion 0 5.71 2.52 7.39 6.42 1.44 6.51 3.45 6.21 5.02 4.50 14.87 2.73 4.40 22.46 24.74 21.03 22.04 8.11 13.05 5.96 8.26 8.65 10.35 6 E1a_E2a KnownJunction 0 20.89 9.87 29.60 20.64 8.23 25.61 19.34 12.73 16.64 12.36 50.70 7.50 20.29 62.69 63.66 37.17 22.53 23.38 35.67 14.06 13.78 11.88 11.44 7 ER2a ExonRegion 0 25.20 8.39 29.26 14.13 14.84 24.58 12.34 21.86 11.83 12.60 51.89 19.95 25.72 69.65 63.62 50.77 38.49 14.53 29.49 11.41 21.47 24.42 24.22 8 E2a_E3a KnownJunction 0 43.42 6.51 38.85 29.37 23.68 34.07 15.15 29.57 12.56 16.82 43.38 0.00 7.30 64.22 85.05 53.15 49.84 21.89 26.35 8.63 17.36 28.96 28.77 9 ER3a ExonRegion 1 21.82 8.02 39.02 27.28 16.47 18.06 8.45 25.89 16.41 17.18 54.08 3.25 27.24 68.21 78.17 95.79 52.43 17.66 37.31 19.27 19.88 50.33 26.66 10 E3_Da NovelBoundary 0 9.93 6.45 5.17 8.62 7.22 0.00 0.00 11.42 1.79 2.95 12.16 0.00 0.00 7.36 18.67 4.36 7.85 0.00 13.27 0.00 0.00 2.57 7.94 11 E3a_E4a KnownJunction 0 20.23 3.03 51.48 26.07 22.67 11.36 2.21 16.39 17.59 12.81 45.12 6.00 6.82 85.59 111.01 47.42 47.97 11.07 41.79 33.62 37.25 17.57 18.27 12 ER3b ExonRegion 1 17.19 3.90 44.95 23.82 17.34 13.86 5.93 16.94 18.97 15.28 45.38 2.08 22.14 86.86 90.75 73.95 59.81 7.24 41.41 26.47 23.98 32.25 20.67 13 I3 Intron 0 15.61 2.50 5.61 4.68 6.58 5.63 1.63 2.77 4.52 3.94 5.05 2.19 2.92 12.67 6.50 7.76 4.56 1.27 7.83 3.60 4.74 6.72 9.92 14 I3_AR1 ActiveIntronRegion 0 16.25 2.76 5.47 4.34 6.78 4.45 2.05 3.50 5.15 4.43 5.40 1.00 2.30 14.18 7.41 6.92 5.76 1.60 7.56 4.04 5.56 7.62 10.98 15 I3_SR1 SilentIntronRegion 0 16.38 1.62 7.26 6.71 6.24 11.51 0.00 0.00 2.47 2.29 4.37 7.22 5.73 8.51 3.28 12.93 0.00 0.00 11.21 2.40 1.92 4.21 7.02 16 E4_Aa NovelBoundary 0 64.90 6.05 14.25 17.85 8.23 16.47 12.01 18.03 10.21 11.17 14.95 5.85 0.00 30.49 37.83 25.46 41.14 10.82 23.15 2.43 8.46 8.45 20.32 17 ER4a ExonRegion 0 33.17 9.67 61.50 32.43 23.51 32.58 13.07 20.80 13.95 17.64 54.92 30.03 29.84 81.81 95.71 59.03 72.41 15.84 48.39 26.60 40.02 39.25 34.30 18 E4a_E5a KnownJunction 0 82.24 15.00 41.81 43.38 34.80 38.56 20.80 22.84 16.03 27.80 76.70 43.96 53.41 119.37 84.80 81.00 69.66 31.59 69.18 24.61 28.36 51.25 54.80 19 ER5a ExonRegion 0 67.05 17.87 67.11 46.46 28.75 32.23 21.23 32.00 23.87 26.79 74.20 48.83 40.39 93.46 109.67 91.61 111.68 30.43 67.21 34.37 43.61 62.07 50.25 20 E5_Da KnownBoundary 0 7.56 0.00 4.79 9.89 3.74 12.32 0.00 4.60 9.78 6.15 5.11 0.00 0.00 2.47 0.00 4.27 0.00 6.14 4.80 3.07 0.00 3.12 0.00 21 E5a_E5b KnownJunction 0 83.94 5.33 80.42 33.20 43.80 39.30 25.44 26.04 12.36 28.07 81.81 96.33 72.40 134.26 133.14 70.32 119.49 17.37 70.31 38.09 40.22 57.13 30.73 22 ER5b ExonRegion 0 7.08 1.31 9.99 8.06 3.41 9.61 3.04 5.48 5.95 3.44 3.56 0.27 2.19 3.09 3.25 3.03 2.84 6.57 9.56 3.10 7.51 2.72 3.86 23 E5_Ab NovelBoundary 0 24.23 0.00 2.93 8.62 4.07 38.39 12.90 4.76 2.92 1.67 5.21 0.00 6.82 7.59 5.32 3.67 4.68 4.93 8.09 0.00 2.53 5.45 8.02 24 E5_Db NovelBoundary 0 22.60 2.70 36.40 38.99 28.10 12.66 6.32 20.95 7.73 13.22 21.22 25.06 13.15 24.84 25.96 32.73 23.84 12.81 19.58 12.14 8.03 13.72 10.93 25 ER5c ExonRegion 0 79.67 9.66 66.61 36.55 43.10 42.11 21.18 27.96 13.19 24.58 82.63 59.68 74.71 133.47 128.38 80.35 91.60 20.26 80.66 30.40 37.70 47.18 44.89 26 ER5d ExonRegion 0 76.70 19.70 45.36 38.01 36.37 34.26 19.69 14.63 15.12 19.84 77.82 26.94 58.02 101.33 102.62 76.12 72.44 23.03 73.26 32.35 34.16 49.27 43.67 27 E5_Dc KnownBoundary 0 35.49 11.51 19.34 12.82 0.00 27.31 6.27 0.00 6.45 7.33 4.32 0.00 13.64 17.19 27.81 6.58 0.00 16.25 0.00 8.50 2.41 6.25 3.93 28 E5c_E5d KnownJunction 0 59.42 11.64 31.02 44.98 30.05 5.22 11.22 11.54 14.58 19.07 65.38 18.61 55.52 60.92 99.26 72.03 77.79 21.68 58.35 20.26 24.65 36.92 31.67 29 ER5e ExonRegion 0 19.62 4.61 16.93 9.23 5.60 19.13 4.24 2.19 7.94 8.52 5.72 3.51 5.80 17.38 19.08 7.58 4.50 19.79 16.03 6.72 4.22 6.92 9.80 30 E5_Ad KnownBoundary 0 3.63 6.25 11.35 18.71 4.16 30.10 10.60 4.85 4.51 12.01 7.00 0.00 0.00 8.06 4.45 18.63 13.46 23.67 26.17 5.69 8.53 13.04 3.41 31 ER5f ExonRegion 0 54.69 19.95 55.36 54.91 35.39 45.15 29.85 21.80 20.98 20.83 68.08 47.10 55.93 83.43 125.33 104.56 86.95 27.97 65.16 38.10 34.49 60.07 54.97 32 E5_Dd NovelBoundary 0 2.82 0.00 3.43 4.10 0.00 0.00 0.00 7.93 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.81 14.21 2.49 0.00 3.12 10.59 33 E5d_E6a KnownJunction 0 62.23 11.91 39.44 86.60 38.71 61.78 15.19 23.95 20.34 17.86 70.12 35.71 34.09 117.19 164.91 109.71 83.78 20.60 89.88 26.97 26.69 77.89 45.33 34 ER6a ExonRegion 0 45.43 17.14 48.17 65.52 29.84 32.10 19.86 20.15 15.75 29.71 70.97 33.23 63.56 85.75 133.37 99.86 81.01 29.19 97.65 24.56 29.55 70.26 72.02 35 E6_Da NovelBoundary 0 13.04 0.00 10.88 5.56 0.00 0.00 2.25 4.56 0.00 2.85 6.63 0.00 0.00 0.00 0.00 0.00 4.39 13.18 4.05 0.00 0.00 0.00 0.00 36 E6a_E7a KnownJunction 0 78.53 25.65 51.74 85.50 60.87 29.02 26.37 23.86 17.62 38.31 74.18 37.51 53.89 87.47 104.83 57.08 96.21 24.21 69.84 38.41 33.55 55.11 49.60 37 ER7a ExonRegion 0 71.01 19.89 37.93 56.95 23.37 34.22 14.94 23.99 14.56 23.66 58.05 28.03 43.15 73.09 108.89 95.24 67.24 20.81 56.45 15.97 22.97 52.02 46.60 38 E7_Da NovelBoundary 0 48.82 0.00 14.04 12.42 22.75 5.00 11.44 5.79 1.33 10.02 2.53 6.30 6.49 9.30 4.45 18.88 20.10 9.04 73.98 2.49 0.00 12.80 11.61 39 E7a_E8a KnownJunction 0 45.19 6.71 22.50 50.61 4.33 48.61 3.84 28.63 5.61 12.71 44.54 6.00 32.79 48.97 86.53 18.46 30.39 13.97 35.39 24.10 22.92 29.51 20.49 40 I7_AR1 ActiveIntronRegion 0 7.13 0.21 0.00 0.00 3.10 1.83 1.32 1.73 3.71 0.00 3.87 4.33 0.00 3.08 5.80 8.13 3.47 1.85 0.00 0.45 0.00 8.22 0.00 41 E8_Aa NovelBoundary 0 16.60 2.83 1.54 2.96 4.24 13.69 0.00 2.55 1.79 10.02 2.11 6.30 6.82 2.12 5.07 8.72 13.37 1.58 8.47 3.26 0.00 8.70 4.10 42 ER8a ExonRegion 0 38.89 5.24 20.56 35.54 18.06 32.37 7.02 18.32 9.29 12.21 39.72 14.18 22.63 49.98 64.05 22.29 32.18 11.50 29.54 16.49 17.19 23.60 29.44 43 E8_Da KnownBoundary 0 63.49 5.59 18.92 35.66 34.13 25.16 12.28 17.33 15.05 15.31 38.33 6.15 27.11 43.50 90.61 37.68 44.04 14.88 26.64 9.46 15.32 19.41 38.58 44 ER8b ExonRegion 0 20.97 7.46 12.92 14.39 5.68 10.59 6.19 14.58 5.46 11.21 28.84 8.66 8.53 29.87 56.99 24.90 35.35 7.14 22.39 11.30 15.12 17.14 18.21