Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LACE1 Gene 0 6.09 8.27 4.26 9.03 8.79 11.61 6.63 5.99 6.87 10.80 5.16 9.64 6.61 7.31 7.51 4.90 6.18 4.94 5.92 6.68 3.28 4.83 4.62 2 368977 Transcript 0 6.49 9.95 3.13 7.68 14.69 26.26 8.32 4.31 4.90 12.20 1.45 8.83 8.22 10.10 3.35 2.84 5.01 3.98 5.65 9.73 1.85 3.98 5.22 3 430458 Transcript 0 0.00 0.00 0.39 0.05 2.89 0.00 0.73 0.00 0.59 0.03 0.38 0.00 0.00 0.00 0.40 1.52 1.29 0.54 0.59 1.33 0.00 0.00 0.00 4 421954 Transcript 0 0.00 0.00 0.00 1.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 437715 Transcript 0 2.10 3.90 1.68 2.70 2.13 2.74 3.34 1.06 2.56 1.09 1.76 5.34 2.07 1.92 3.10 1.43 4.72 2.23 4.23 6.48 0.99 0.54 5.31 6 442745 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 441543 Transcript 0 2.65 1.02 3.68 5.11 2.68 2.75 0.99 3.46 3.40 6.02 7.73 5.41 3.52 6.90 7.25 7.43 4.95 1.39 1.59 4.79 1.65 4.17 3.67 8 431865 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.76 0.00 9 486863 Transcript 0 0.90 1.06 0.24 1.44 4.00 1.38 1.92 0.64 2.23 1.69 0.47 1.72 1.48 0.86 2.29 0.72 3.68 2.57 1.26 0.63 0.54 1.98 0.87 10 481842 Transcript 0 0.00 0.34 1.51 2.35 3.99 3.64 1.10 1.71 2.44 4.18 0.00 0.59 1.92 0.66 1.64 0.00 0.00 0.91 1.58 1.41 1.09 0.69 0.49 11 ER1a ExonRegion 0 2.53 0.15 1.61 0.11 4.67 8.79 5.39 0.53 0.21 4.05 0.00 1.94 0.00 7.14 1.42 2.40 3.60 1.81 0.00 3.82 1.53 0.00 1.26 12 E1_Ab KnownBoundary 0 2.82 0.00 1.63 1.27 7.64 13.69 5.26 3.70 1.16 2.63 0.00 5.85 0.00 0.00 4.45 10.08 0.00 4.27 0.00 3.26 6.05 0.00 7.60 13 ER1b ExonRegion 0 6.53 2.90 3.24 3.28 4.38 12.47 5.31 5.19 4.61 5.02 8.35 0.72 2.08 11.40 6.76 9.13 13.44 12.37 2.32 8.98 8.58 3.07 10.84 14 E1a_E4a KnownJunction 0 3.11 2.89 0.00 5.33 3.06 23.91 6.49 8.13 1.13 8.38 7.84 0.00 0.00 7.30 0.00 7.52 20.57 2.57 3.67 5.56 14.76 3.12 15.62 15 E1a_E8b KnownJunction 0 0.00 0.00 0.00 1.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER1c ExonRegion 0 1.49 1.56 0.50 5.37 5.98 20.28 7.01 7.63 3.34 6.34 7.62 6.11 0.00 8.12 3.24 11.54 23.49 4.02 1.50 4.26 10.50 2.33 12.78 17 E2_Aa NovelBoundary 0 0.00 8.09 0.00 3.36 4.33 24.64 5.79 3.86 0.00 1.67 2.47 6.30 0.00 2.12 0.00 7.78 8.79 2.57 0.00 12.08 0.00 2.69 3.16 18 ER2a ExonRegion 0 0.85 4.90 4.40 7.34 3.22 2.21 1.60 3.10 2.96 0.69 1.55 13.19 3.10 1.20 3.34 0.00 4.18 1.19 3.81 11.11 0.00 0.00 0.00 19 E2_Da NovelBoundary 0 9.85 6.38 8.19 12.79 3.82 0.00 0.00 6.33 1.30 10.07 5.37 14.55 13.64 7.24 0.00 8.72 7.11 4.31 4.24 13.23 2.78 0.00 0.00 20 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 I2_AR6 ActiveIntronRegion 0 3.70 17.92 0.00 2.64 0.84 0.00 4.72 4.86 2.47 4.16 0.60 4.33 0.00 0.00 0.00 0.00 3.30 3.00 0.00 8.38 0.00 2.60 5.87 22 I2_AR7 ActiveIntronRegion 0 4.23 16.27 0.00 4.09 2.68 8.56 2.65 5.19 2.47 7.07 1.93 4.33 0.00 0.00 0.00 0.00 1.10 1.85 0.00 8.51 0.00 2.08 5.87 23 E3_Aa NovelBoundary 0 23.78 20.85 18.27 30.53 27.50 23.34 45.93 50.44 113.69 55.77 9.95 6.45 0.00 7.59 4.45 11.96 43.85 19.40 33.04 14.64 5.56 8.27 36.71 24 ER3a ExonRegion 0 5.45 6.80 0.64 0.76 3.17 6.01 8.42 0.06 4.71 2.57 3.74 2.83 3.10 4.55 5.97 4.28 9.98 5.49 8.88 8.34 2.97 1.62 15.94 25 E3_Ab KnownBoundary 0 96.91 89.59 18.04 42.02 70.54 37.93 89.12 49.49 29.08 36.72 29.85 35.71 44.96 26.19 31.15 65.79 34.32 46.84 77.46 77.60 40.77 27.74 67.18 26 ER3b ExonRegion 0 6.02 6.57 1.54 0.00 6.31 6.54 5.26 5.85 8.27 5.53 2.87 0.44 3.61 4.46 6.40 9.83 10.83 7.11 6.70 10.09 2.66 2.40 14.08 27 E3a_E4a KnownJunction 0 10.67 3.35 1.77 1.90 8.57 2.90 0.00 10.10 6.16 9.40 2.63 0.00 0.00 5.47 5.19 16.41 12.72 18.99 0.00 11.76 3.15 0.00 12.04 28 ER4a ExonRegion 0 8.68 11.64 7.54 9.70 14.16 19.52 14.01 15.42 12.01 18.75 24.11 12.20 7.77 17.55 20.78 16.88 30.52 13.77 13.81 15.55 8.24 10.18 17.79 29 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.02 0.00 0.00 0.00 3.20 0.00 0.00 0.00 30 E4a_E6a KnownJunction 0 18.37 18.22 15.11 14.82 12.73 42.02 10.16 13.84 11.05 21.60 14.27 36.91 28.73 19.13 9.77 8.12 28.33 8.08 18.35 5.62 8.46 15.37 15.45 31 ER5a ExonRegion 0 0.00 0.00 1.17 0.16 0.00 0.00 2.19 0.00 0.00 0.08 1.13 0.00 0.00 0.00 1.20 0.55 3.87 1.61 1.76 0.78 0.00 0.00 0.00 32 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 8.66 0.00 0.00 0.00 1.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER6a ExonRegion 0 22.58 16.27 11.03 14.99 8.92 28.73 9.27 13.83 11.12 19.50 16.11 34.64 28.14 14.62 22.24 14.86 33.01 10.47 15.93 7.09 8.81 16.67 14.68 34 ER6b ExonRegion 0 16.50 11.25 13.70 17.44 11.80 18.71 5.38 12.03 10.86 20.97 25.80 31.01 16.85 19.42 24.81 23.47 15.09 5.69 8.26 15.89 4.59 11.95 13.36 35 E6b_E8b KnownJunction 0 10.15 5.99 14.01 16.65 11.80 12.15 4.42 13.60 10.59 18.08 26.80 23.86 19.80 31.79 39.19 32.21 11.22 5.60 8.38 24.35 8.77 17.64 11.01 36 E6b_E9a NovelJunction 0 2.82 0.00 0.00 0.00 0.00 0.00 2.25 0.00 2.92 1.64 2.37 6.75 0.00 9.30 0.00 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 37 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER8a ExonRegion 0 5.29 2.03 7.35 10.22 5.35 5.50 1.99 6.91 6.79 12.04 15.46 10.82 7.04 13.81 14.51 14.86 9.90 2.77 3.19 9.57 3.31 8.33 7.34 39 ER8b ExonRegion 0 9.85 10.15 14.92 18.54 10.94 8.57 9.31 17.87 10.86 18.98 24.29 45.31 21.64 23.82 21.37 17.10 24.90 7.87 17.16 9.67 13.42 19.41 11.48 40 E8a_E9a KnownJunction 0 7.41 8.16 23.51 22.04 22.33 8.01 16.74 16.68 10.71 14.13 24.43 69.47 23.38 31.79 24.35 12.73 13.00 3.48 4.42 14.70 11.31 3.12 3.76 41 E9_Aa NovelBoundary 0 12.89 0.00 0.00 1.30 3.99 0.00 2.25 4.76 0.00 0.00 0.00 0.00 6.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER9a ExonRegion 0 15.16 21.58 20.89 22.71 27.23 14.82 17.98 13.27 15.22 20.29 26.66 54.96 22.47 35.08 25.69 25.74 25.18 9.86 14.64 14.72 9.42 17.27 12.50 43 E9_Da KnownBoundary 0 26.67 48.22 15.37 17.38 12.05 13.46 14.09 18.28 12.93 26.62 28.17 55.07 32.79 27.90 9.52 11.54 20.66 10.78 9.32 19.24 8.34 19.23 15.28 44 ER9b ExonRegion 0 11.17 35.16 9.64 11.97 7.68 14.22 14.18 14.75 12.98 20.56 15.16 36.33 36.30 24.46 18.63 16.33 19.71 8.97 19.48 12.64 12.78 19.05 11.53 45 E9b_E10a KnownJunction 0 2.96 33.81 15.43 9.06 8.23 12.72 8.57 16.06 15.60 18.45 23.06 43.96 6.17 43.97 24.23 14.70 13.46 12.02 27.11 9.27 17.05 36.56 25.27 46 ER10a ExonRegion 0 17.08 29.16 12.81 12.08 4.25 7.04 12.01 9.04 15.44 17.71 14.81 44.07 24.76 27.82 30.75 14.65 22.25 5.93 10.86 14.21 8.26 15.25 8.90 47 E10a_E11a KnownJunction 0 9.04 27.17 16.03 5.13 7.98 21.69 6.58 7.56 7.90 16.33 19.32 38.56 14.28 11.48 15.20 11.02 25.81 4.19 13.84 14.25 5.50 9.19 3.50 48 E10a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.76 0.00 49 ER11a ExonRegion 0 12.16 10.17 7.48 8.94 9.39 20.95 15.08 15.47 10.53 30.19 24.05 29.65 9.14 21.75 28.37 17.43 20.53 15.85 21.06 9.45 4.67 10.03 7.27 50 E11a_E12a KnownJunction 0 13.56 8.62 1.57 13.52 7.05 13.06 5.52 23.17 15.19 39.25 27.06 19.36 33.76 28.37 19.28 12.30 19.26 14.55 8.09 12.27 8.59 11.94 0.00 51 ER12a ExonRegion 0 15.89 10.29 8.42 9.70 9.99 9.92 8.58 11.33 8.44 22.40 17.16 10.48 19.49 25.67 28.24 19.62 23.54 11.24 7.37 9.54 10.28 10.59 8.31 52 E12a_E13a KnownJunction 0 7.04 24.60 15.79 7.06 22.58 10.05 15.41 3.66 0.00 16.65 16.11 12.30 13.64 30.96 18.42 15.04 30.20 25.91 8.75 11.89 9.20 8.27 15.96 53 ER13a ExonRegion 0 5.90 21.77 6.92 5.53 14.89 9.81 8.88 9.74 5.95 15.51 26.98 6.77 8.98 26.01 15.41 12.35 22.83 13.25 13.41 7.19 15.80 3.93 6.29 54 E13a_E14b KnownJunction 0 12.74 15.19 6.95 7.59 20.12 16.92 10.02 3.78 8.97 22.30 38.90 0.00 12.01 27.84 27.69 24.78 30.67 13.93 13.46 3.26 30.70 4.71 4.27 55 ER14a ExonRegion 0 0.77 1.02 0.03 2.02 2.44 0.51 3.65 0.05 0.27 1.44 0.16 1.25 0.94 0.13 2.54 0.81 0.76 0.94 1.58 0.01 0.66 0.03 1.43 56 E14_Ab KnownBoundary 0 3.78 0.00 0.00 0.00 3.74 0.00 6.32 0.00 1.68 6.72 0.00 6.30 0.00 0.00 0.00 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 57 ER14b ExonRegion 0 16.42 15.98 8.72 11.76 15.76 27.05 17.53 8.83 19.00 27.86 24.80 22.08 19.14 29.66 21.85 17.68 25.38 13.53 10.51 7.64 17.67 13.71 7.75 58 E14a_E15a KnownJunction 0 10.37 6.51 8.57 14.78 8.49 19.42 20.80 5.38 12.53 22.19 23.48 11.55 6.82 19.66 13.35 18.46 18.42 11.03 12.71 14.32 8.40 5.94 3.41 59 E14a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 7.81 2.50 0.00 0.00 5.09 2.93 0.00 0.00 0.00 0.00 0.00 0.00 8.79 5.55 0.00 0.00 0.00 5.27 0.00 60 ER15a ExonRegion 0 17.26 9.00 6.31 10.97 20.25 13.97 14.66 6.86 14.41 22.76 26.94 14.09 8.55 31.31 19.88 24.37 11.24 16.52 11.82 8.60 10.99 10.11 7.98 61 E15a_E16a KnownJunction 0 6.59 14.47 8.49 18.21 20.03 2.56 25.08 14.54 12.62 19.69 31.27 12.45 19.32 14.07 0.00 8.72 0.00 10.82 9.60 18.34 18.10 14.08 7.68 62 ER16a ExonRegion 0 3.43 5.42 6.75 13.17 13.75 20.70 10.84 8.04 12.77 20.24 19.84 36.84 17.11 22.42 29.01 12.91 10.13 14.44 15.70 13.61 9.88 10.53 6.00 63 E16_Da KnownBoundary 0 0.00 0.00 0.00 1.83 0.00 2.38 2.25 0.00 1.30 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 14.12 3.13 0.00 0.00 0.00 64 E16a_E16b KnownJunction 0 0.00 13.02 5.09 10.26 20.54 17.94 16.38 10.10 9.09 20.09 33.01 13.20 8.28 34.49 19.66 11.88 19.64 13.43 0.00 3.26 14.33 9.37 3.24 65 ER16b ExonRegion 0 1.92 2.17 0.68 2.31 1.75 1.13 2.11 1.87 1.34 0.71 1.24 3.90 3.50 2.45 4.32 1.35 1.49 1.21 2.21 1.89 0.96 0.65 1.18 66 E16_Ab KnownBoundary 0 3.33 0.00 0.00 3.70 3.82 0.00 0.00 5.01 1.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 4.35 67 ER16c ExonRegion 0 11.44 8.35 5.90 19.78 22.27 9.12 12.99 14.58 8.18 14.41 29.20 19.89 12.42 19.01 17.72 19.60 15.88 14.58 10.24 7.59 14.65 11.99 8.02 68 E16_Db KnownBoundary 0 29.12 11.12 4.91 22.37 23.09 4.77 16.83 15.12 8.39 10.48 29.22 12.45 26.78 12.13 13.97 23.16 14.03 15.21 20.99 9.01 9.45 14.94 7.77 69 ER16d ExonRegion 0 9.90 8.97 3.05 12.23 22.69 13.51 9.64 8.11 13.32 12.97 8.00 34.31 12.42 14.26 12.42 7.31 9.63 6.97 9.26 7.88 4.95 7.84 4.39 70 E16_Dc KnownBoundary 0 13.41 20.59 3.49 15.78 19.78 14.31 6.76 4.23 8.97 11.17 2.26 58.82 0.00 13.48 15.20 6.75 13.00 5.43 11.11 8.50 8.96 3.00 10.07 71 ER16e ExonRegion 0 4.01 6.36 3.40 10.32 11.97 21.63 10.31 6.02 7.57 12.62 1.49 18.00 10.88 9.74 5.16 3.91 7.78 4.37 4.90 7.45 2.06 5.35 4.30 72 E16_Dd KnownBoundary 0 7.11 5.79 1.83 4.40 18.68 37.36 23.89 0.00 8.51 14.24 0.00 0.00 6.66 2.41 0.00 0.00 9.26 2.57 4.80 2.68 0.00 3.06 0.00 73 ER16f ExonRegion 0 3.61 7.82 0.67 5.49 12.85 29.39 12.44 1.90 7.48 10.69 0.27 4.21 7.33 2.91 1.92 0.46 3.86 3.98 3.19 6.59 0.37 1.44 3.60 74 E16_De KnownBoundary 0 0.00 6.71 0.00 4.13 0.00 19.99 2.25 5.09 7.12 16.65 0.00 6.30 0.00 2.41 0.00 3.85 0.00 4.73 4.61 0.00 0.00 0.00 3.16 75 E16_Ac KnownBoundary 0 11.19 16.05 0.00 2.06 38.03 56.62 15.46 0.00 0.00 1.64 2.68 18.46 26.30 27.08 6.30 8.12 12.81 2.49 9.41 25.38 3.15 3.00 12.55 76 ER16g ExonRegion 0 6.35 13.32 0.00 4.09 24.48 49.15 10.59 3.46 3.89 12.62 1.93 16.88 18.53 18.51 2.90 2.97 8.42 5.54 9.56 16.70 2.20 4.17 9.69 77 ER16h ExonRegion 0 3.51 5.06 1.97 7.03 9.42 14.05 3.79 9.00 12.96 14.14 2.08 5.23 3.34 1.91 2.00 2.18 2.77 10.06 7.17 12.87 5.36 2.56 6.23 78 E16_Df KnownBoundary 0 3.48 5.85 4.46 22.34 8.66 29.64 5.43 11.13 10.27 20.93 4.11 12.30 6.33 5.47 4.45 3.33 4.77 2.57 3.58 14.19 0.00 2.94 12.98 79 E16f_E17a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 80 ER16i ExonRegion 0 10.60 16.40 7.79 18.84 14.91 20.84 8.97 8.95 10.59 19.94 2.40 7.65 6.15 4.63 5.72 3.15 3.01 4.59 7.38 8.67 1.81 7.78 4.70 81 E16_Dg NovelBoundary 0 2.82 14.80 10.61 12.65 8.66 8.23 8.61 14.25 11.05 15.79 2.16 0.00 6.82 0.00 4.57 3.25 0.00 0.00 0.00 3.13 3.03 3.12 0.00 82 ER17a ExonRegion 0 0.00 0.67 3.02 4.71 7.98 7.29 2.19 3.41 4.88 8.36 0.00 1.18 3.84 1.33 3.28 0.00 0.00 1.82 3.16 2.82 2.19 1.38 0.97