Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C6orf203 Gene 0 55.61 50.59 39.83 43.39 50.09 51.79 33.40 26.26 22.99 34.30 30.25 52.75 52.86 47.24 62.91 43.78 46.98 25.82 28.02 34.74 23.23 30.64 32.06 2 443043 Transcript 0 3.37 5.39 9.66 7.66 11.00 4.47 6.00 2.69 6.47 9.72 8.22 12.39 31.53 20.00 22.71 12.54 15.52 4.77 3.87 7.02 3.87 4.27 4.09 3 405204 Transcript 0 0.00 3.35 0.00 6.03 0.00 2.33 3.71 1.93 1.30 5.75 2.68 0.00 0.00 2.30 4.45 0.00 12.16 1.74 0.00 2.88 0.00 0.00 0.00 4 311381 Transcript 1 103.37 86.46 16.88 18.11 81.81 94.43 44.76 27.48 28.82 34.85 60.47 5.17 29.78 54.86 74.20 111.68 96.83 36.87 72.38 45.99 69.14 42.07 73.41 5 489790 Transcript 0 18.18 14.26 17.29 17.68 16.21 18.28 11.55 13.53 9.48 11.54 16.46 27.03 25.45 15.86 21.54 20.29 31.76 12.28 16.45 15.81 11.47 22.40 19.56 6 ER1a ExonRegion 0 11.35 7.21 0.67 0.37 2.92 10.00 6.38 0.00 0.00 0.00 1.76 0.00 0.00 16.24 3.96 18.10 3.00 4.37 6.66 3.09 2.20 3.60 12.81 7 ER1b ExonRegion 1 115.90 80.54 12.93 12.50 70.45 148.32 53.19 18.86 16.55 29.50 43.59 2.54 23.85 78.27 64.88 129.90 83.95 49.41 91.44 51.94 78.42 85.64 156.10 8 E1_Da KnownBoundary 0 21.86 2.76 1.27 6.59 3.99 14.48 8.57 0.00 0.00 1.45 2.63 0.00 0.00 2.47 13.35 7.86 4.77 48.21 4.80 6.52 15.38 9.37 15.88 9 E1a_E2a NovelJunction 0 0.00 3.29 0.00 0.00 3.31 36.17 1.72 0.00 1.56 3.01 2.42 0.00 6.82 0.00 0.00 3.59 13.18 6.47 4.80 0.00 6.30 2.39 7.68 10 E1a_E3a KnownJunction 1 204.63 170.89 28.86 34.86 160.95 188.87 87.53 54.96 57.64 69.71 119.98 6.00 54.87 109.72 145.50 223.36 190.37 73.75 144.76 91.98 134.98 84.13 146.82 11 ER1c ExonRegion 0 3.90 7.25 19.87 16.69 9.26 11.67 6.68 10.05 7.69 12.49 9.19 5.89 11.81 17.32 27.96 16.26 14.33 24.85 7.98 20.41 9.94 7.70 11.74 12 E1_Db NovelBoundary 0 3.70 3.35 34.59 14.32 12.65 12.44 3.89 20.99 20.78 15.66 13.85 67.52 32.47 16.78 18.05 15.98 20.01 9.78 3.95 17.90 6.30 6.06 12.04 13 E1b_E2a KnownJunction 0 0.00 0.00 7.48 8.16 0.00 0.00 6.62 0.00 4.60 6.53 0.00 0.00 0.00 2.12 8.90 0.00 7.57 0.00 4.05 2.56 0.00 3.12 0.00 14 E1b_E3a KnownJunction 0 0.00 3.35 0.00 6.03 0.00 2.33 3.71 1.93 1.30 5.75 2.68 0.00 0.00 2.30 4.45 0.00 12.16 1.74 0.00 2.88 0.00 0.00 0.00 15 I1 Intron 0 4.80 4.61 22.76 16.57 12.74 6.65 7.50 11.09 7.93 6.97 9.20 18.88 37.77 22.63 26.81 24.25 11.97 17.51 5.05 17.36 6.49 9.92 13.98 16 I1_SR1 SilentIntronRegion 0 4.82 4.63 22.85 16.65 12.79 6.68 7.54 11.14 7.96 7.00 9.24 18.96 37.94 22.73 26.93 24.36 12.02 17.59 5.08 17.44 6.52 9.96 14.04 17 E2_Aa NovelBoundary 0 0.00 9.93 12.98 12.85 29.12 10.45 9.19 6.90 1.79 11.15 2.16 5.40 38.47 26.02 8.90 16.58 8.32 8.46 0.00 17.39 0.00 5.45 4.10 18 ER2a ExonRegion 1 2.78 12.89 14.82 6.19 21.89 11.25 7.90 3.83 7.50 8.86 6.45 19.77 40.68 29.80 22.27 22.42 9.62 5.68 7.56 7.82 2.76 7.36 8.42 19 E2_Da NovelBoundary 0 7.56 8.95 11.83 13.19 8.49 0.00 11.97 2.01 4.08 10.53 2.68 5.40 0.00 4.83 14.71 24.87 4.77 11.03 0.00 11.70 0.00 0.00 3.59 20 E2a_E3a KnownJunction 0 7.33 3.29 6.68 8.62 11.12 2.16 3.49 4.23 7.32 13.78 18.22 17.41 53.89 28.08 36.96 15.21 29.36 8.62 0.00 10.67 8.83 2.33 3.84 21 E3_Aa NovelBoundary 0 0.00 12.56 11.29 10.69 10.95 7.21 10.73 5.05 1.56 8.97 12.21 12.15 0.00 12.48 9.64 8.63 16.08 11.52 8.75 8.56 3.15 2.33 7.77 22 ER3a ExonRegion 0 83.49 79.55 43.42 65.71 83.68 86.07 57.99 53.66 39.95 72.46 65.08 53.32 88.07 89.27 90.87 120.20 97.97 52.87 75.95 58.73 62.38 62.76 84.61 23 E3_Ab KnownBoundary 0 232.26 92.48 97.28 101.25 164.09 205.00 106.70 78.82 37.07 95.74 60.44 109.39 135.87 75.11 88.88 65.37 68.26 48.58 22.02 90.63 19.65 67.17 39.18 24 ER3b ExonRegion 0 149.93 142.75 81.49 104.63 136.70 153.24 94.48 64.51 47.07 77.98 79.83 151.86 147.66 108.56 134.92 72.16 106.24 37.82 36.74 76.05 40.42 63.14 36.07 25 E3_Da NovelBoundary 1 13.48 18.29 6.71 19.81 34.38 13.63 12.14 18.65 2.98 18.56 0.00 0.00 39.28 0.00 0.00 0.00 15.71 3.44 8.75 18.47 2.97 14.51 3.59 26 E3a_E4a KnownJunction 0 20.60 9.34 13.54 15.22 10.53 17.26 5.34 20.54 4.83 10.83 22.06 29.71 25.32 11.48 13.35 14.61 40.67 10.74 13.37 10.93 13.65 28.66 12.72 27 E3a_E5a KnownJunction 0 152.40 145.24 92.63 118.77 63.92 97.84 76.36 53.89 45.69 87.81 49.22 97.53 101.45 75.99 140.92 85.02 135.30 48.29 32.10 102.08 30.95 31.66 16.82 28 I3_AR1 ActiveIntronRegion 0 10.52 9.69 7.39 9.09 8.83 5.17 14.04 1.73 0.74 4.65 5.24 15.78 17.92 5.50 1.35 0.00 4.07 4.35 2.14 13.58 0.00 6.25 11.46 29 E4_Aa NovelBoundary 0 10.37 10.92 13.07 18.21 15.53 12.78 18.95 7.02 3.04 14.42 0.00 12.60 12.17 2.41 16.69 7.01 4.77 4.73 0.00 11.70 0.00 2.45 4.35 30 ER4a ExonRegion 0 15.77 19.17 21.04 20.14 21.89 19.29 17.76 6.52 14.12 12.26 10.85 24.36 25.58 20.25 29.73 25.97 22.84 13.82 19.54 20.69 9.28 16.13 26.40 31 E4_Da NovelBoundary 0 10.89 9.47 17.62 11.42 8.23 11.41 19.21 10.06 1.68 10.77 10.37 12.60 0.00 11.71 6.30 15.12 18.42 4.48 9.32 6.39 0.00 14.82 16.39 32 I4 Intron 0 5.32 5.40 5.11 6.45 8.75 6.18 5.53 5.13 4.63 3.65 2.57 3.75 4.15 7.12 8.23 8.88 5.32 7.15 3.78 4.04 7.73 9.19 6.13 33 I4_SR1 SilentIntronRegion 0 5.25 5.04 4.53 4.67 12.31 5.51 6.10 3.65 4.24 2.12 2.05 7.67 6.30 8.30 6.17 4.21 3.51 2.28 1.69 3.77 2.34 7.38 6.76 34 I4_AR1 ActiveIntronRegion 0 6.10 6.07 6.51 8.69 8.65 7.57 6.39 7.05 5.69 5.07 3.48 2.88 4.04 7.68 10.23 12.74 7.61 11.16 5.77 4.52 11.61 12.07 6.54 35 E5_Aa NovelBoundary 0 14.00 23.02 6.15 8.09 34.89 14.82 16.16 5.91 4.83 10.93 7.32 6.30 0.00 2.47 5.19 11.79 4.02 2.11 9.60 6.52 3.09 13.41 3.76 36 ER5a ExonRegion 0 97.65 110.59 87.52 101.30 85.48 84.61 60.45 44.32 33.94 66.44 54.57 137.59 105.43 89.99 145.06 57.37 93.69 32.12 30.76 50.39 28.23 39.16 26.95 37 E5_Da NovelBoundary 0 9.78 10.06 16.65 9.19 8.06 22.20 17.80 6.45 5.82 3.89 0.00 0.00 6.17 0.00 0.00 0.00 4.49 8.04 0.00 5.75 3.03 0.00 0.00 38 E5a_E6a KnownJunction 0 110.24 130.90 149.40 123.06 124.11 75.81 106.61 71.18 46.21 83.16 77.07 150.50 120.93 87.65 151.18 69.98 88.92 57.37 60.90 82.77 42.19 63.74 40.72 39 ER6a ExonRegion 1 116.72 78.51 75.96 69.70 73.74 57.64 37.29 41.95 37.08 47.87 33.08 109.15 68.20 54.59 97.91 24.83 52.15 17.08 25.76 33.89 20.03 39.84 15.57 40 ER6b ExonRegion 0 2.12 2.03 4.90 1.36 2.68 0.00 1.99 0.00 0.00 0.00 0.97 4.33 4.69 0.00 2.90 0.00 3.30 0.00 0.00 0.00 3.31 0.00 0.00 41 IG31_AR1 ActiveIntergenicRegion 0 11.81 13.83 0.88 5.59 1.78 2.67 0.00 3.75 0.41 3.10 1.88 7.05 5.63 2.00 8.12 7.25 4.40 2.69 4.64 2.29 1.09 1.01 4.28