Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FOXO3 Gene 0 115.57 343.55 147.93 252.60 232.35 444.95 224.98 169.96 299.21 211.93 14.40 11.30 16.68 6.01 16.92 3.92 19.17 313.71 173.22 302.82 170.10 179.14 136.66 2 343882 Transcript 0 3.29 5.84 5.41 5.30 4.76 4.10 2.13 2.84 10.22 13.28 0.21 0.65 0.00 0.00 0.00 0.00 6.53 23.72 8.14 16.33 19.18 0.83 4.70 3 406360 Transcript 0 0.49 1.78 1.92 0.47 0.62 3.93 0.61 0.59 3.49 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.06 9.26 6.00 7.33 16.12 3.44 5.46 4 ER1a ExonRegion 0 0.00 0.57 0.51 0.00 0.00 4.04 0.00 2.19 6.50 8.21 0.00 1.22 0.00 0.00 0.00 0.00 4.07 9.10 9.01 13.99 19.80 0.05 4.10 5 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.16 0.00 0.00 15.31 19.02 0.00 0.00 0.00 0.00 0.00 0.00 15.52 61.77 12.24 30.74 36.63 0.00 8.02 6 ER2a ExonRegion 0 0.49 1.78 1.92 0.47 0.62 3.93 0.61 0.59 3.49 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.06 9.26 6.00 7.33 16.12 3.44 5.46 7 E2_Ab KnownBoundary 0 0.00 2.83 4.64 0.00 0.00 5.68 0.00 0.00 4.75 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.93 4.24 11.51 25.95 0.00 0.00 8 ER2b ExonRegion 0 1.72 7.92 10.30 9.99 2.13 25.20 6.50 12.66 48.92 34.73 0.19 0.00 1.26 1.58 3.51 0.82 6.36 97.49 34.71 79.63 81.09 28.96 36.04 9 E2a_E3a KnownJunction 0 13.19 51.24 49.58 51.38 7.30 119.53 34.01 66.33 224.22 164.85 42.33 0.00 6.66 16.78 8.90 0.00 17.02 310.15 94.97 298.62 244.33 146.04 79.56 10 I2_AR3 ActiveIntronRegion 0 3.64 10.86 13.15 18.28 9.00 10.14 19.98 10.18 23.87 9.35 0.00 0.46 0.00 0.00 2.96 0.00 3.64 18.37 8.34 25.82 6.02 2.04 27.95 11 I2_AR4 ActiveIntronRegion 0 6.35 23.95 10.48 15.22 24.23 8.15 33.98 10.37 21.00 10.00 0.00 0.00 0.00 0.00 5.96 0.00 6.05 12.63 6.72 25.30 4.28 4.17 32.63 12 I2_AR5 ActiveIntronRegion 0 27.93 40.98 31.94 43.28 26.63 11.67 35.05 36.42 49.49 24.60 0.00 0.00 2.27 0.08 1.99 0.09 0.60 9.46 11.97 33.27 3.23 3.34 19.87 13 I2_AR7 ActiveIntronRegion 0 7.20 24.72 12.14 15.22 13.47 7.75 32.90 20.21 31.87 19.45 0.00 0.00 0.56 0.00 1.68 0.00 2.40 11.09 11.80 28.89 4.30 1.25 31.72 14 I2_AR8 ActiveIntronRegion 0 11.26 14.31 15.62 12.36 18.35 18.08 27.61 24.82 38.11 29.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.51 18.54 30.02 13.14 4.09 27.37 15 I2_AR9 ActiveIntronRegion 0 10.04 20.60 13.04 11.25 21.49 3.19 27.89 21.35 34.26 31.82 0.00 0.00 5.14 0.00 0.00 0.00 2.66 29.44 9.86 19.63 9.88 7.06 42.25 16 I2_SR7 SilentIntronRegion 0 7.49 17.71 15.08 21.78 13.70 8.27 23.37 21.84 40.43 16.28 0.00 0.00 2.46 0.00 2.11 0.17 1.57 14.49 13.10 28.83 7.72 2.85 30.76 17 I2_AR18 ActiveIntronRegion 0 7.26 26.69 2.45 8.38 6.34 8.07 29.20 14.60 27.88 19.94 0.00 0.00 0.88 0.00 1.83 0.00 1.52 12.83 11.76 39.36 5.96 0.47 31.36 18 I2_SR15 SilentIntronRegion 0 13.78 40.53 2.24 19.58 10.84 21.75 34.31 20.01 28.30 22.21 0.00 0.00 0.00 0.00 1.12 0.00 0.00 6.78 12.24 25.20 3.32 6.21 37.09 19 I2_AR23 ActiveIntronRegion 0 7.41 20.34 1.23 17.04 18.73 13.75 35.08 19.30 25.53 22.17 0.00 0.00 0.00 0.00 8.70 0.00 1.65 11.39 13.80 25.53 2.20 4.51 32.79 20 I2_SR16 SilentIntronRegion 0 9.61 14.70 6.35 15.20 12.93 5.16 22.75 20.32 22.86 13.16 0.00 0.00 2.96 0.00 3.44 0.00 2.44 16.32 15.83 33.06 3.46 2.95 31.58 21 I2_AR25 ActiveIntronRegion 0 7.09 15.74 15.77 32.24 14.31 10.76 26.25 30.51 41.40 23.99 0.00 0.00 0.00 0.00 9.71 0.00 0.00 5.46 3.19 18.87 2.20 5.34 30.39 22 I2_AR26 ActiveIntronRegion 0 31.35 43.97 20.40 36.50 33.90 17.99 44.36 40.89 62.82 30.37 0.04 0.73 1.24 0.00 2.39 0.14 1.37 16.06 15.66 34.86 6.46 5.87 23.99 23 I2_SR18 SilentIntronRegion 0 46.27 35.85 28.73 31.96 33.14 14.16 36.85 29.28 53.64 29.64 0.28 0.00 0.56 0.00 2.21 0.43 0.96 7.78 11.60 28.83 2.25 5.16 19.68 24 I2_AR27 ActiveIntronRegion 0 17.28 38.20 16.99 35.17 26.84 17.63 49.22 44.55 68.16 33.86 0.00 0.42 1.36 0.47 0.92 0.70 2.71 22.26 25.91 36.13 9.93 5.72 31.78 25 I2_AR28 ActiveIntronRegion 0 12.42 25.62 20.10 26.17 13.91 3.67 39.37 19.47 52.29 23.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.14 20.39 17.45 3.23 7.64 32.30 26 I2_SR19 SilentIntronRegion 0 12.07 37.25 9.73 33.31 29.37 12.55 42.70 29.78 53.82 17.83 0.00 0.60 2.76 0.00 2.09 0.50 0.04 15.16 12.74 31.43 1.86 7.93 27.96 27 I2_AR29 ActiveIntronRegion 0 16.70 45.58 15.56 38.62 23.83 12.25 40.28 31.84 59.72 27.06 0.00 0.65 2.20 0.00 2.32 0.00 2.09 17.05 18.43 29.16 4.42 7.22 28.99 28 I2_SR20 SilentIntronRegion 0 14.63 23.08 10.37 23.01 22.01 9.30 30.51 21.50 37.56 21.94 0.15 0.00 2.34 0.00 3.42 0.00 2.00 23.73 13.89 22.00 10.44 5.26 29.34 29 I2_AR30 ActiveIntronRegion 0 35.22 30.95 11.03 29.48 30.82 10.58 37.40 27.47 53.88 29.87 0.00 0.00 2.21 0.00 3.01 0.00 2.33 12.47 8.57 20.19 3.39 5.50 14.07 30 I2_AR3 ActiveIntronRegion 0 28.19 22.76 14.67 12.09 18.88 6.37 17.73 13.57 22.26 11.05 0.00 0.00 0.49 0.00 1.68 0.00 2.17 12.66 19.01 19.10 8.28 0.46 13.69 31 ER3a ExonRegion 0 13.00 73.57 44.32 72.11 28.36 161.59 63.82 72.67 210.94 131.76 4.96 3.10 7.90 3.18 8.03 1.82 14.61 444.40 136.28 242.37 205.25 116.51 116.97 32 E3a_E4a KnownJunction 0 44.45 384.47 181.04 164.15 143.29 565.30 236.05 158.42 455.20 262.68 67.70 0.00 20.29 17.25 14.83 19.14 65.54 798.64 302.50 743.17 492.12 251.12 339.75 33 ER4a ExonRegion 0 171.97 500.65 210.80 362.30 345.33 626.73 323.16 235.78 386.77 278.97 20.46 16.27 22.93 8.00 22.91 5.32 23.85 333.41 218.47 378.08 185.88 234.54 168.38 34 ER4b ExonRegion 0 9.88 16.95 15.73 15.90 14.27 6.11 6.40 6.34 8.85 12.62 0.64 0.72 0.00 0.00 0.00 0.00 0.00 0.31 3.19 4.26 1.10 2.43 1.96