Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	TUBE1	Gene	0	63.16	134.40	64.31	171.07	103.55	154.10	62.11	69.98	115.75	97.22	69.02	96.23	134.76	52.08	37.50	47.31	42.81	32.45	39.89	75.41	25.85	65.54	41.05
2	368662	Transcript	1	8.10	17.60	2.17	3.74	7.57	116.84	15.32	0.40	5.47	4.88	10.16	0.00	19.83	20.79	17.08	32.01	8.11	5.02	12.83	16.23	8.37	9.35	22.57
3	368657	Transcript	1	4.54	28.45	3.99	30.50	24.16	41.49	15.54	12.91	52.14	28.48	5.65	20.87	29.01	14.35	1.28	6.10	9.12	14.66	13.33	51.99	3.61	20.03	8.09
4	441191	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	368658	Transcript	0	6.14	9.14	0.15	2.16	4.18	16.86	9.46	0.41	0.67	0.48	0.00	2.51	1.85	0.01	0.07	0.17	0.00	0.00	0.21	0.02	0.00	0.07	0.00
6	ER1a	ExonRegion	1	8.10	17.60	2.17	3.74	7.57	116.84	15.32	0.40	5.47	4.88	10.16	0.00	19.83	20.79	17.08	32.01	8.11	5.02	12.83	16.23	8.37	9.35	22.57
7	E1_Ab	KnownBoundary	1	29.49	50.06	8.40	13.52	56.20	344.52	42.09	6.94	17.36	11.20	37.06	0.00	64.28	27.78	28.68	77.07	16.27	47.38	48.19	31.38	21.50	18.68	72.05
8	ER1b	ExonRegion	1	22.82	41.20	13.23	10.25	28.11	139.98	31.51	5.06	32.11	18.55	26.50	0.82	41.60	45.57	33.72	82.27	27.75	11.78	25.99	53.01	36.28	44.42	73.76
9	E1a_E2a	KnownJunction	1	20.82	15.72	17.92	11.95	20.37	20.78	25.04	8.30	31.77	11.39	4.47	0.00	47.07	15.95	19.53	31.44	0.00	0.00	4.24	45.83	11.18	13.35	23.99
10	ER2a	ExonRegion	0	11.01	4.31	9.52	6.70	11.39	10.21	10.88	17.03	31.91	18.06	29.12	12.17	37.65	9.88	13.17	10.64	29.57	9.39	8.91	26.16	27.13	5.55	13.45
11	E2a_E3a	KnownJunction	1	7.19	3.09	7.72	6.69	17.15	7.50	6.09	29.82	40.19	36.69	98.55	13.05	21.26	9.77	29.30	8.72	66.76	7.09	13.93	38.73	64.43	8.14	3.24
12	ER3a	ExonRegion	1	6.19	6.83	14.87	20.21	8.94	24.88	8.57	26.32	53.83	40.70	101.42	19.69	46.28	51.51	38.65	38.02	62.28	53.06	59.26	76.72	53.18	36.60	46.76
13	E3a_E5a	KnownJunction	0	6.67	12.17	21.58	40.19	4.33	16.30	4.02	22.84	57.12	37.07	56.59	25.06	61.52	99.12	56.37	74.68	40.02	102.22	40.47	88.14	27.99	71.21	102.09
14	E3a_E6a	NovelJunction	0	0.00	3.35	4.85	13.29	0.00	2.44	2.25	6.70	21.15	9.21	9.42	0.00	0.00	34.02	10.75	16.06	13.65	23.21	26.35	37.52	0.00	21.06	28.43
15	I3	Intron	0	1.21	1.41	0.35	2.44	2.37	3.48	6.37	0.98	4.89	2.16	3.67	20.00	27.38	3.84	0.39	1.69	3.55	2.10	1.21	6.73	4.04	8.31	5.20
16	I3_AR2	ActiveIntronRegion	0	1.32	1.31	0.16	2.81	2.47	4.38	7.06	0.92	4.72	2.58	3.60	21.75	32.94	4.78	0.26	0.79	3.81	2.49	1.09	6.35	5.09	7.48	6.42
17	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER4b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.20	0.00	0.00	1.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER5a	ExonRegion	1	14.56	18.55	23.81	48.15	14.16	51.73	12.87	39.49	62.46	41.01	54.95	67.11	139.49	73.81	51.57	146.30	44.16	112.14	58.00	61.74	30.24	75.73	156.50
20	E5a_E6a	KnownJunction	0	29.93	26.57	19.57	42.82	21.14	117.89	25.70	52.94	68.63	52.14	67.70	63.47	174.34	89.00	27.44	47.94	83.03	77.14	12.89	49.98	31.01	45.19	81.61
21	I5_AR1	ActiveIntronRegion	1	2.95	1.34	2.36	7.47	5.05	7.00	4.64	2.49	1.80	3.68	1.54	20.63	33.39	3.25	1.90	2.91	1.97	0.55	1.57	5.08	0.87	6.84	0.58
22	E6_Aa	NovelBoundary	1	2.89	6.51	3.37	3.73	4.33	7.44	9.85	0.00	5.53	6.39	4.74	6.30	65.42	7.24	0.00	11.88	0.00	0.00	0.00	5.82	0.00	11.45	7.51
23	ER6a	ExonRegion	0	13.36	45.30	23.83	45.55	73.95	219.47	49.41	53.19	74.38	57.89	95.05	78.12	156.02	76.88	31.34	68.90	72.34	51.90	34.79	67.70	40.41	49.18	50.10
24	E6a_E7a	KnownJunction	0	16.60	126.49	32.49	70.59	48.90	132.59	57.46	36.51	93.49	63.53	113.98	69.17	114.77	99.54	34.98	38.79	78.63	39.42	33.88	62.83	42.63	66.07	43.11
25	ER7a	ExonRegion	1	30.69	64.02	27.70	65.13	55.34	120.17	64.70	50.90	97.13	78.42	98.25	81.20	178.57	100.59	32.18	62.71	84.77	37.39	26.58	82.80	44.91	68.02	46.50
26	E7_Da	KnownBoundary	0	0.00	19.01	8.81	35.96	19.52	35.66	18.50	18.94	54.31	31.24	7.58	20.56	48.21	24.02	0.00	8.72	31.70	12.81	3.67	57.91	14.52	14.63	7.85
27	E7a_E8a	KnownJunction	0	13.41	33.88	20.82	33.13	12.22	37.25	5.92	25.38	33.51	44.56	73.18	50.12	154.05	76.99	41.54	47.00	67.98	16.54	17.32	20.13	27.12	51.62	25.01
28	ER7b	ExonRegion	1	4.54	28.45	3.99	30.50	24.16	41.49	15.54	12.91	52.14	28.48	5.65	20.87	29.01	14.35	1.28	6.10	9.12	14.66	13.33	51.99	3.61	20.03	8.09
29	E7_Db	NovelBoundary	0	6.82	45.12	0.00	27.30	11.54	112.95	39.13	8.09	36.28	14.56	14.06	56.87	13.64	12.77	5.19	8.72	0.00	7.34	35.86	46.79	5.19	25.35	16.39
30	I7	Intron	0	8.00	39.82	13.42	67.64	37.22	69.03	30.58	27.72	75.36	36.38	14.20	49.40	80.84	15.38	5.61	10.45	7.10	10.80	12.21	51.94	4.74	25.27	7.01
31	I7_AR1	ActiveIntronRegion	0	8.01	39.86	13.43	67.71	37.26	69.09	30.61	27.75	75.44	36.42	14.22	49.45	80.92	15.40	5.61	10.46	7.11	10.82	12.22	51.99	4.75	25.29	7.02
32	E8_Aa	NovelBoundary	0	46.30	46.70	31.19	115.44	68.68	131.57	65.80	42.96	112.88	67.05	24.59	18.91	27.60	26.08	13.60	18.03	11.59	44.06	13.27	103.23	20.88	25.60	34.40
33	ER8a	ExonRegion	0	43.87	95.66	44.93	132.27	60.83	114.25	49.21	65.42	117.13	86.24	112.34	111.07	150.78	67.06	34.75	58.18	76.25	27.45	44.15	79.54	22.74	75.07	44.08
34	E8_Da	NovelBoundary	0	41.27	152.80	56.98	234.57	62.22	63.94	35.46	70.15	162.18	80.45	34.59	57.77	140.25	14.36	22.75	24.52	15.52	20.31	46.59	84.05	7.35	48.74	20.06
35	E8a_E9a	KnownJunction	0	44.23	41.83	22.62	45.32	27.67	73.88	35.15	24.19	26.42	36.18	80.81	69.77	157.94	67.10	13.35	81.60	48.71	7.42	21.55	12.34	11.80	54.99	41.74
36	I8	Intron	0	45.45	118.10	34.75	174.42	82.27	113.65	50.40	50.27	112.29	56.71	14.62	53.57	67.25	14.64	6.58	10.88	8.05	8.54	24.87	55.55	2.15	28.99	14.33
37	I8_AR1	ActiveIntronRegion	0	45.88	119.24	35.09	176.08	83.04	114.74	50.87	50.75	113.37	57.25	14.76	54.09	67.90	14.78	6.64	10.98	8.13	8.61	25.11	56.08	2.17	29.27	14.47
38	E9_Aa	NovelBoundary	1	87.72	249.82	48.31	212.09	170.54	146.11	117.34	50.03	122.37	60.71	9.42	114.34	79.70	39.14	4.45	23.67	8.32	13.47	20.61	49.92	11.43	16.10	8.11
39	ER9a	ExonRegion	0	71.65	218.18	63.90	219.68	94.73	183.56	71.08	82.07	120.49	100.70	114.85	142.26	187.93	57.06	41.36	52.95	56.35	42.69	62.34	94.03	27.51	72.63	46.70
40	E9_Da	KnownBoundary	0	98.54	275.94	95.71	309.12	140.66	180.69	98.57	100.26	158.62	122.36	106.55	224.17	219.79	57.51	50.07	61.86	61.06	59.40	69.37	112.05	27.37	89.09	61.97
41	ER9b	ExonRegion	0	87.26	239.70	79.25	284.05	128.74	206.18	81.10	105.13	178.49	123.31	108.09	202.51	211.66	81.91	36.13	74.30	63.30	61.87	68.95	114.00	41.91	100.31	81.56
42	E9_Db	NovelBoundary	0	14.74	25.26	5.85	25.14	8.57	10.62	5.92	22.43	22.80	24.28	14.37	12.60	45.78	14.95	4.45	11.28	12.16	1.58	20.52	6.33	5.44	21.55	6.91
43	E9b_E10a	KnownJunction	0	129.87	240.94	77.11	330.19	123.43	265.59	100.29	119.28	221.18	125.23	88.60	160.40	134.24	76.58	42.15	71.86	55.17	62.80	93.37	76.83	44.42	101.46	73.75
44	I9	Intron	0	14.29	17.26	10.62	15.90	15.56	14.22	14.16	10.86	15.13	17.71	6.98	17.47	27.07	10.36	5.04	4.97	2.87	3.45	2.55	15.93	1.47	12.53	4.12
45	I9_AR1	ActiveIntronRegion	0	15.21	18.89	11.52	17.26	14.30	15.59	15.89	12.19	17.26	19.92	8.80	19.64	29.59	11.41	5.82	4.95	2.02	3.88	2.79	20.14	1.74	14.61	3.86
46	E10_Aa	NovelBoundary	0	12.89	32.43	36.01	38.52	16.81	2.21	29.50	21.73	9.81	32.99	6.95	18.01	40.91	24.55	20.03	16.06	18.42	3.77	8.28	14.89	3.15	24.13	16.22
47	ER10a	ExonRegion	0	111.83	198.71	102.15	357.10	184.91	267.51	108.68	102.27	214.56	129.04	119.87	150.40	184.67	83.60	59.10	72.98	80.56	62.63	77.06	131.13	42.10	90.71	60.19
48	E10_Da	NovelBoundary	0	87.94	24.40	32.88	38.02	16.38	8.12	6.40	20.87	11.55	28.23	5.00	25.36	54.05	11.71	0.00	3.59	4.21	1.87	3.58	45.57	0.00	24.43	8.28
49	E10a_E11a	KnownJunction	0	121.06	187.14	114.72	355.70	145.84	313.74	114.91	94.47	225.72	117.20	105.34	163.25	180.35	69.10	57.73	81.18	38.71	67.94	81.32	110.38	10.26	91.73	50.88
50	I10	Intron	0	8.99	17.18	8.87	14.43	14.53	16.10	12.92	11.36	12.10	18.42	7.50	17.17	25.78	6.54	3.92	6.43	1.89	3.72	4.81	12.08	2.52	14.04	6.60
51	I10_SR1	SilentIntronRegion	0	9.01	17.23	8.90	14.46	14.56	16.14	12.95	11.39	12.13	18.47	7.52	17.21	25.84	6.55	3.93	6.44	1.89	3.73	4.82	12.11	2.53	14.07	6.61
52	E11_Aa	NovelBoundary	0	60.08	36.84	26.43	44.98	46.01	21.92	38.02	19.59	16.09	35.89	22.85	18.01	62.33	4.94	4.45	0.00	0.00	3.40	8.94	14.57	12.05	16.53	4.35
53	ER11a	ExonRegion	0	113.02	261.48	99.12	297.89	158.53	270.10	107.28	88.97	204.18	136.92	124.49	131.45	203.04	98.33	71.56	67.20	66.46	64.49	73.11	131.42	52.84	85.28	75.75
54	E11a_E12a	KnownJunction	0	137.14	322.18	108.84	341.88	206.62	337.14	149.45	90.61	204.34	137.26	117.29	115.84	225.63	84.88	60.08	53.83	47.59	43.90	107.39	122.47	55.54	72.13	57.79
55	ER12a	ExonRegion	0	136.96	239.88	127.88	349.62	194.72	277.42	109.40	112.67	210.04	157.36	113.36	161.33	214.67	84.24	66.78	85.90	70.21	69.63	82.56	133.00	56.55	91.37	81.29
56	E12a_E13a	KnownJunction	0	185.88	218.45	146.74	361.96	187.35	189.78	78.83	131.27	257.29	161.57	104.76	189.81	160.22	97.48	78.62	91.43	92.47	58.03	116.62	137.23	55.35	107.71	58.90
57	ER13a	ExonRegion	0	89.16	186.71	100.44	232.27	154.33	174.21	77.48	101.77	132.54	144.10	52.33	119.58	152.20	38.43	42.97	34.93	24.06	16.15	32.04	66.99	14.46	84.39	24.72
58	E13_Da	KnownBoundary	0	6.52	12.43	7.13	29.43	12.39	19.59	5.70	8.01	10.82	10.31	0.00	12.45	20.29	0.00	0.00	3.25	0.00	0.00	3.67	5.75	0.00	0.00	0.00
59	ER13b	ExonRegion	0	6.14	9.14	0.15	2.16	4.18	16.86	9.46	0.41	0.67	0.48	0.00	2.51	1.85	0.01	0.07	0.17	0.00	0.00	0.21	0.02	0.00	0.07	0.00