Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-393I2.1 Gene 0 3.32 5.81 2.33 5.19 5.12 2.98 9.31 4.18 4.80 2.88 10.10 5.42 8.01 12.77 8.82 8.46 11.12 11.67 4.07 13.60 4.35 1.33 4.43 2 392985 Transcript 0 1.15 2.50 0.80 2.38 1.79 2.63 2.82 1.76 2.73 0.97 8.91 1.88 2.12 10.62 3.41 3.57 6.49 9.70 2.51 9.79 3.32 1.00 2.17 3 IG43_AR3 ActiveIntergenicRegion 0 9.65 18.62 4.30 11.34 10.79 12.33 5.97 7.82 16.17 8.56 9.60 0.96 0.38 7.57 1.42 2.79 8.98 37.09 8.35 26.30 7.57 1.55 4.75 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.14 0.00 0.00 0.00 0.00 4.78 0.00 0.00 0.00 1.64 0.00 1.83 1.47 0.00 0.00 5 E1_Da NovelBoundary 0 39.64 68.94 4.79 10.39 46.94 20.33 12.59 6.08 16.00 3.79 2.32 11.70 6.82 14.77 0.00 0.00 0.00 25.91 17.79 18.98 0.00 9.37 7.26 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 0.00 5.00 0.00 0.00 0.00 6.80 0.00 3.20 5.50 0.00 0.00 7 I1 Intron 0 7.26 14.65 7.33 12.90 11.78 12.32 7.63 9.40 17.20 6.99 6.49 11.77 8.75 9.06 3.31 2.89 7.79 12.76 8.06 23.71 4.61 2.89 5.00 8 I1_AR1 ActiveIntronRegion 0 22.68 27.54 8.55 14.45 27.71 18.30 6.62 11.65 19.04 7.33 6.27 2.69 5.63 10.20 6.80 2.17 8.89 14.32 13.45 20.56 4.97 1.77 6.86 9 I1_SR1 SilentIntronRegion 0 9.14 20.62 5.74 15.84 12.17 11.32 8.09 11.69 20.07 8.34 6.31 10.35 10.66 6.82 2.24 3.19 6.00 9.84 8.36 25.79 1.36 2.93 6.28 10 I1_AR2 ActiveIntronRegion 0 3.28 4.83 1.86 8.24 11.91 7.87 6.28 8.08 15.06 6.07 3.59 17.29 9.93 5.48 2.97 1.85 3.29 2.95 5.81 16.30 0.29 2.13 2.52 11 I1_SR2 SilentIntronRegion 0 3.79 9.14 11.17 11.03 8.38 14.18 7.84 6.84 14.36 5.71 7.91 12.96 6.62 12.91 4.06 3.09 11.50 19.81 7.64 24.84 10.10 3.36 4.15 12 E2_Aa NovelBoundary 0 24.23 5.85 11.56 14.18 3.99 26.63 31.66 4.44 19.94 11.01 8.74 12.00 6.82 9.89 8.90 3.67 18.23 40.54 0.00 22.50 16.99 0.00 4.35 13 ER2a ExonRegion 0 2.54 4.64 1.16 4.03 4.79 7.15 3.95 2.30 7.55 1.53 6.31 3.19 0.00 18.13 1.93 4.35 6.70 27.19 7.10 25.03 10.86 1.77 3.95 14 E2a_E3a KnownJunction 0 0.00 3.35 0.00 3.73 0.00 7.78 0.00 0.00 4.31 0.00 7.84 0.00 0.00 15.66 4.45 3.33 3.83 16.75 4.80 18.60 0.00 2.39 4.27 15 ER3a ExonRegion 0 0.54 0.71 0.92 1.23 0.00 0.91 0.02 0.99 1.58 0.88 8.15 1.85 0.05 10.55 3.23 5.55 6.52 6.54 1.26 6.58 2.37 1.70 0.37 16 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 24.95 0.00 0.00 7.83 0.00 0.00 12.90 0.00 0.00 0.00 0.00 0.00 0.00 17 Ix_AR3 ActiveIntronRegion 0 5.70 7.97 7.63 15.59 11.47 4.14 31.96 20.82 11.84 16.49 2.35 12.43 17.64 1.42 10.74 11.72 18.99 8.88 3.78 14.39 0.97 0.56 6.48 18 Ix_AR4 ActiveIntronRegion 0 9.26 4.07 7.20 9.20 13.38 3.67 27.47 7.99 6.18 16.06 3.87 9.74 23.45 0.00 3.63 11.15 23.11 7.39 3.19 13.56 0.00 0.00 17.62 19 E4_Aa NovelBoundary 0 84.98 52.62 88.76 89.87 44.40 37.76 57.72 72.50 60.39 73.31 11.11 12.45 61.68 4.53 15.08 33.75 29.17 81.58 11.39 40.46 25.76 2.57 7.17 20 ER4a ExonRegion 0 5.01 8.79 3.52 7.64 7.76 2.56 15.80 6.50 5.50 4.41 13.03 8.12 14.80 12.36 14.28 11.79 15.46 8.97 4.45 13.29 3.04 1.12 6.63