Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-250B2.1 Gene 0 9.35 9.08 2.66 7.49 6.88 17.71 5.85 4.25 4.55 5.14 5.82 3.89 1.33 2.80 3.45 2.60 4.96 5.31 18.39 8.36 4.81 3.44 2.99 2 452402 Transcript 0 10.19 11.23 2.08 7.01 7.92 14.88 5.31 4.46 4.78 5.55 3.05 4.50 2.33 1.47 2.99 0.89 6.05 4.45 18.31 7.94 3.93 4.07 1.21 3 443221 Transcript 0 5.83 1.54 0.48 1.10 1.01 6.68 2.10 1.36 2.54 0.00 6.86 3.40 0.35 1.88 0.92 1.74 1.25 0.34 0.00 5.63 1.24 1.57 1.11 4 427048 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 IG29_SR5 SilentIntergenicRegion 0 2.49 6.31 2.67 3.88 3.46 12.41 4.28 3.26 6.24 4.69 6.40 7.62 8.68 5.70 1.47 3.03 6.22 3.10 13.21 15.09 3.65 2.43 3.86 6 IG29_AR5 ActiveIntergenicRegion 0 1.78 6.95 4.58 5.51 3.09 13.66 4.96 3.98 4.80 3.25 3.22 5.19 3.70 5.94 3.69 6.16 7.48 10.34 18.35 9.04 6.38 5.49 6.63 7 IG29_AR6 ActiveIntergenicRegion 0 8.69 12.48 2.46 16.39 9.96 25.86 4.83 4.95 8.80 4.43 6.68 4.01 5.64 6.53 5.42 5.42 2.85 10.85 15.55 10.38 5.80 2.80 3.95 8 ER1a ExonRegion 0 12.32 7.70 3.87 6.67 2.79 27.67 6.47 2.74 4.57 4.85 0.84 3.56 4.48 2.33 1.08 1.34 5.43 3.91 8.91 5.91 1.79 1.75 2.60 9 E1_Ab KnownBoundary 0 26.38 12.50 8.84 16.51 3.82 73.54 8.08 9.28 9.29 3.12 7.11 0.00 18.51 0.00 11.62 0.00 12.34 5.97 44.52 5.31 2.84 6.06 3.24 10 ER1b ExonRegion 0 9.73 4.96 3.81 10.35 6.69 30.95 2.73 5.00 7.25 7.54 7.73 3.06 1.03 3.01 5.94 3.70 7.53 10.03 33.21 10.30 5.43 9.25 7.38 11 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 4.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.32 0.00 0.00 0.00 0.00 0.00 12 E1a_E2b KnownJunction 0 10.37 9.54 3.67 8.79 11.54 12.44 0.00 4.19 5.56 12.36 2.68 6.15 0.00 0.00 0.00 0.00 4.39 11.48 32.19 6.39 2.84 8.57 0.00 13 ER2a ExonRegion 0 0.26 0.34 0.15 0.34 3.12 2.45 1.38 0.14 0.31 0.43 0.89 0.36 0.00 0.14 0.00 0.00 0.14 2.23 1.19 0.18 0.18 0.26 0.00 14 ER2b ExonRegion 0 16.48 7.63 4.94 9.89 9.62 14.28 6.68 5.92 9.01 7.22 7.97 3.12 0.00 3.81 5.27 2.29 9.20 8.76 23.28 9.45 6.57 3.47 4.83 15 E2a_E3a KnownJunction 0 14.22 0.00 3.19 1.27 4.33 10.22 0.00 1.77 3.18 2.79 2.16 0.00 0.00 4.77 6.30 7.95 0.00 5.47 12.14 6.39 6.05 7.84 4.18 16 E2a_E4a KnownJunction 0 11.19 12.83 0.00 6.59 11.54 4.88 10.55 6.78 3.47 1.48 2.21 0.00 0.00 0.00 9.52 0.00 8.32 0.00 20.24 8.50 5.44 3.00 0.00 17 ER3a ExonRegion 0 2.70 0.44 1.07 0.61 4.26 8.13 4.48 0.52 1.49 1.89 2.43 0.86 1.13 0.82 1.81 2.47 4.69 3.69 6.01 3.14 0.97 1.67 1.77 18 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER4a ExonRegion 0 12.03 18.66 3.60 11.26 7.75 27.09 7.62 6.88 5.72 6.88 10.79 4.65 0.75 5.54 6.44 3.36 4.25 7.55 36.43 12.87 11.26 5.41 3.08 20 E4_Da KnownBoundary 0 12.52 0.00 1.60 2.06 0.00 4.54 1.77 2.51 1.65 0.00 9.00 5.55 6.17 0.00 15.08 4.36 0.00 2.32 4.71 6.39 3.15 0.00 0.00 21 E4a_E5a KnownJunction 0 13.04 20.65 6.62 19.01 15.03 15.33 8.13 11.34 3.56 10.05 4.21 17.56 0.00 0.00 4.45 0.00 0.00 6.63 36.90 5.69 3.03 0.00 0.00 22 ER4b ExonRegion 0 5.83 1.54 0.48 1.10 1.01 6.68 2.10 1.36 2.54 0.00 6.86 3.40 0.35 1.88 0.92 1.74 1.25 0.34 0.00 5.63 1.24 1.57 1.11 23 E5_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 7.64 8.40 0.00 1.85 4.40 1.48 4.84 0.00 0.00 4.47 0.00 0.00 4.02 6.80 14.12 6.14 0.00 0.00 7.85 24 ER5a ExonRegion 0 15.07 21.49 4.18 20.73 20.96 21.06 12.81 10.59 4.82 13.25 4.22 8.50 0.17 2.13 5.24 4.09 5.27 7.66 33.99 13.68 6.21 3.90 4.01 25 E5_Da KnownBoundary 0 7.41 5.92 4.11 16.28 18.68 25.72 8.17 11.99 10.45 7.58 11.48 18.46 0.00 6.89 0.00 8.72 14.12 6.18 14.40 12.08 13.84 0.00 8.62 26 ER5b ExonRegion 0 6.88 14.86 0.78 6.00 5.80 14.54 4.23 4.13 5.52 3.50 6.47 8.30 4.82 3.54 1.37 2.23 6.05 2.41 11.90 10.96 5.66 2.95 2.24 27 IG30 Intergenic 0 10.02 15.28 7.08 17.67 8.65 21.27 4.49 7.43 7.88 7.85 3.11 2.51 2.71 1.18 1.86 0.62 1.62 4.35 18.14 7.77 2.27 2.91 2.05 28 IG30_AR1 ActiveIntergenicRegion 0 10.59 12.38 8.04 24.12 10.41 19.09 3.85 9.51 9.37 8.90 3.28 6.09 2.26 2.24 2.62 0.59 2.97 4.04 15.58 9.34 1.76 6.65 3.22 29 IG30_SR1 SilentIntergenicRegion 0 5.78 14.74 6.43 10.58 8.30 33.81 6.58 11.16 5.40 6.44 5.40 3.14 3.00 0.72 1.03 0.00 1.78 1.76 11.47 6.47 0.00 1.50 1.06 30 IG30_AR2 ActiveIntergenicRegion 0 11.82 18.19 7.89 19.07 9.38 22.59 4.89 7.24 8.93 8.81 3.03 1.67 3.06 1.13 1.98 0.81 1.44 5.34 22.08 8.43 3.01 2.50 2.16