Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SYNCRIP Gene 0 82.40 163.71 111.57 100.88 119.14 118.59 194.30 90.99 64.87 124.03 346.68 384.74 267.05 379.27 244.37 257.96 348.89 127.62 83.63 178.17 115.39 183.59 112.75 2 444272 Transcript 0 0.00 7.82 0.01 1.58 0.03 0.06 4.14 0.02 1.99 0.05 3.23 0.00 4.28 1.44 0.03 0.00 0.27 1.61 0.00 1.75 2.57 0.00 0.00 3 449619 Transcript 0 0.00 6.40 7.59 4.02 1.57 1.19 0.53 3.27 0.62 1.99 25.98 33.16 12.99 45.75 12.54 32.70 60.97 9.13 2.23 10.60 15.86 11.27 16.09 4 369622 Transcript 0 15.92 69.04 30.42 36.51 37.74 10.11 32.07 18.26 11.08 19.39 22.20 52.33 42.29 13.78 9.36 15.58 17.22 5.21 6.68 39.09 7.44 27.81 13.69 5 355238 Transcript 0 92.46 110.75 87.72 77.71 82.81 128.05 145.68 96.38 63.36 115.52 332.10 156.46 88.44 525.32 427.89 238.03 327.31 113.72 83.26 143.57 129.88 159.70 121.48 6 ER1a ExonRegion 0 0.00 3.59 0.03 0.00 0.06 0.13 1.79 0.04 1.09 0.11 1.62 0.00 1.75 0.42 0.07 0.00 0.54 0.99 0.00 0.69 2.00 0.00 0.00 7 E1a_E3a KnownJunction 0 0.00 12.04 0.00 3.16 0.00 0.00 6.49 0.00 2.89 0.00 4.84 0.00 6.82 2.47 0.00 0.00 0.00 2.24 0.00 2.81 3.15 0.00 0.00 8 E2_Ab NovelBoundary 1 3.78 3.29 18.01 9.06 4.33 2.56 21.07 2.38 8.22 8.68 129.35 5.25 20.13 191.60 60.45 149.96 517.62 91.32 54.59 34.64 145.18 18.19 114.90 9 ER2a ExonRegion 0 0.00 1.63 5.64 1.31 0.00 0.00 1.06 0.35 1.24 1.24 30.39 0.00 0.00 56.13 19.03 46.01 112.49 11.46 4.46 8.68 25.92 4.83 24.08 10 ER2b ExonRegion 0 4.31 5.22 13.90 4.53 2.42 4.56 8.60 4.44 5.58 7.47 55.16 10.93 17.13 132.99 42.37 115.33 164.27 45.83 31.45 22.78 47.88 7.75 54.01 11 E2_Ac KnownBoundary 1 43.93 57.16 6.27 10.19 11.29 30.32 78.65 3.45 10.47 7.15 113.24 30.61 33.44 153.98 111.38 465.78 134.17 60.48 84.14 63.15 55.48 46.72 236.63 12 ER2c ExonRegion 1 114.29 203.90 57.86 47.95 91.71 146.11 206.68 49.52 35.11 93.46 511.10 65.97 63.15 468.04 246.16 452.47 561.56 228.91 117.63 208.93 283.26 138.69 198.90 13 E2a_E3a KnownJunction 0 97.35 205.23 117.03 91.40 41.85 36.68 53.88 74.51 64.84 148.52 486.12 193.11 185.70 561.48 273.44 460.90 439.83 391.65 88.57 188.62 239.20 151.19 169.70 14 E2a_E4a NovelJunction 1 6.15 25.13 38.50 36.49 15.79 10.85 40.89 39.55 18.92 55.82 84.02 6.30 27.27 80.70 87.64 98.52 73.49 103.97 36.99 110.58 50.16 21.98 44.73 15 ER3a ExonRegion 0 72.17 288.98 162.85 167.82 135.89 129.16 245.10 138.46 102.75 196.13 925.25 578.61 522.50 795.48 540.18 771.86 939.83 344.31 174.88 418.00 375.48 349.63 318.11 16 E3a_E4a KnownJunction 0 62.01 144.38 280.74 300.79 287.35 206.87 356.48 188.53 158.91 274.56 980.67 972.32 890.69 1205.14 1047.66 689.22 1065.08 196.74 201.89 664.55 209.73 516.20 290.49 17 ER4a ExonRegion 0 97.77 274.00 329.74 294.59 212.35 215.56 352.55 277.13 191.01 350.60 1116.21 1326.34 1128.64 931.43 671.94 640.86 1280.28 250.94 168.58 681.17 277.11 557.82 277.48 18 E4a_E5a KnownJunction 0 180.55 520.24 361.64 266.47 346.77 244.23 462.91 341.20 204.42 396.08 1367.08 1833.30 1235.31 1346.23 608.94 864.73 1401.31 362.14 251.77 675.99 344.66 564.94 277.09 19 ER5a ExonRegion 0 290.47 644.12 327.09 254.64 341.38 353.40 614.62 311.06 217.99 400.18 1309.41 1593.93 1327.71 1344.11 773.40 980.17 1494.17 514.29 314.23 676.57 422.77 557.15 409.36 20 E5_Da NovelBoundary 0 10.22 24.54 6.89 12.69 26.49 5.79 35.02 32.90 14.84 21.01 5.16 24.31 0.00 4.71 10.38 7.95 9.07 1.82 4.61 8.37 0.00 3.12 3.50 21 E5a_E6a KnownJunction 0 297.76 754.93 349.49 294.10 234.97 256.90 412.04 272.98 219.99 369.22 1526.49 1312.33 1115.19 1477.49 654.06 1291.46 1777.84 569.78 486.98 721.11 564.15 883.78 610.69 22 E5a_E8a NovelJunction 0 0.00 5.99 3.52 1.83 0.00 0.00 0.00 3.86 1.77 2.95 22.74 31.66 0.00 7.30 10.63 0.00 4.77 6.34 4.24 5.37 2.66 3.00 0.00 23 I5 Intron 0 8.23 14.34 11.41 13.09 13.62 5.05 28.06 22.07 10.08 14.86 4.29 12.41 12.30 3.70 11.73 8.25 14.34 5.81 6.84 16.75 1.70 3.62 8.22 24 I5_SR1 SilentIntronRegion 0 8.25 14.38 11.45 13.12 13.66 5.06 28.13 22.13 10.11 14.89 4.31 12.44 12.32 3.71 11.77 8.27 14.38 5.83 6.86 16.79 1.70 3.63 8.24 25 ER6a ExonRegion 0 165.35 563.46 243.04 224.53 134.59 135.89 276.92 234.69 180.54 327.80 1179.15 1628.83 1066.37 1622.32 749.31 1030.88 1375.20 505.23 321.50 593.45 503.20 625.90 427.93 26 E6_Da NovelBoundary 0 22.08 19.67 15.88 36.59 17.91 4.83 34.18 32.90 25.17 20.87 7.58 56.87 20.45 20.07 19.16 29.31 35.62 11.86 30.59 28.25 5.81 0.00 8.28 27 E6a_E7a KnownJunction 0 168.92 705.14 268.88 200.91 104.92 157.07 314.70 211.86 177.57 302.01 926.66 1523.15 910.01 1390.14 610.79 880.11 1050.49 430.78 336.29 428.76 288.81 468.01 315.50 28 E7_Aa NovelBoundary 0 39.78 35.98 15.82 14.88 15.20 2.21 29.37 33.15 27.43 23.69 5.37 19.66 20.29 9.89 34.24 37.00 25.71 14.92 9.22 14.25 6.05 3.12 14.85 29 ER7a ExonRegion 0 177.85 741.52 291.16 267.46 299.04 289.18 567.60 230.12 184.97 338.93 1361.35 1281.98 724.33 1045.79 530.84 860.93 1376.82 546.32 267.43 556.03 451.03 571.29 370.33 30 E7_Da KnownBoundary 0 305.91 1000.94 271.04 338.15 571.99 426.35 1051.73 209.81 180.35 361.13 1242.16 1693.15 953.18 1456.77 716.36 1190.12 1431.04 491.76 437.47 721.88 356.95 817.90 526.52 31 ER7b ExonRegion 0 228.56 663.46 299.55 324.81 440.37 342.76 706.11 237.93 191.30 381.04 1239.39 1417.57 1029.19 1398.06 855.32 966.96 1298.06 415.78 314.58 661.58 315.47 664.02 446.61 32 E7_Db NovelBoundary 0 3.78 17.50 37.14 38.02 20.46 5.17 18.33 49.70 19.10 30.78 9.32 7.35 27.27 4.59 28.56 14.95 18.05 8.21 7.91 41.61 0.00 0.00 18.95 33 E7b_E8a KnownJunction 0 279.90 613.71 403.62 336.95 331.66 250.48 631.92 308.67 218.00 504.52 1570.77 1599.07 980.46 1645.25 1151.00 833.88 1594.48 272.39 341.37 744.57 249.27 885.62 295.78 34 I7 Intron 0 14.02 17.25 16.76 18.03 16.57 6.46 34.48 27.84 14.89 23.00 4.68 13.44 18.32 1.92 14.60 12.19 16.26 10.13 10.60 27.44 1.60 2.02 8.51 35 I7_SR1 SilentIntronRegion 0 14.02 17.26 16.77 18.04 16.58 6.47 34.50 27.85 14.90 23.02 4.68 13.45 18.34 1.92 14.61 12.20 16.27 10.14 10.61 27.46 1.60 2.03 8.52 36 I7 Intron 0 5.84 8.20 13.30 12.36 11.95 3.27 21.73 19.15 10.18 11.27 3.08 10.25 12.24 1.17 10.08 8.57 12.98 7.44 7.05 15.87 1.39 1.91 5.09 37 I7_SR1 SilentIntronRegion 0 5.84 8.20 13.31 12.37 11.95 3.27 21.74 19.16 10.18 11.27 3.09 10.26 12.24 1.17 10.09 8.57 12.99 7.44 7.06 15.88 1.39 1.91 5.09 38 ER8a ExonRegion 0 350.97 708.25 356.23 308.06 442.27 316.10 656.32 292.99 211.27 445.73 1483.54 1484.12 1040.57 1259.55 765.44 853.20 1367.01 381.08 246.89 633.45 313.87 714.77 374.03 39 E8a_E9a KnownJunction 0 595.66 1579.32 371.87 288.51 829.71 566.44 1254.88 401.13 267.62 487.89 1834.73 1976.59 1474.58 1797.52 1097.35 1006.23 1683.68 347.67 404.15 675.86 438.50 1059.71 519.52 40 ER9a ExonRegion 0 339.19 816.94 352.00 275.82 425.60 418.63 804.34 310.09 212.44 416.11 1273.11 1624.28 1023.03 1553.83 819.59 953.93 1399.87 386.97 296.55 588.94 439.37 671.88 373.51 41 E9_Da KnownBoundary 0 119.95 583.05 413.20 331.36 256.62 356.10 649.06 325.80 182.32 387.62 904.28 1342.94 785.50 1407.27 725.02 822.01 1019.07 493.38 272.67 539.84 433.06 469.78 347.85 42 E9a_E10a KnownJunction 1 0.00 11.18 9.55 6.73 3.14 2.38 0.00 6.20 0.00 2.74 21.58 66.32 25.97 35.38 6.06 19.40 9.44 6.80 0.00 12.53 5.81 17.70 8.11 43 ER9b ExonRegion 0 167.55 401.99 390.66 308.89 311.51 303.26 513.80 287.85 195.22 388.60 1316.10 1404.11 1117.17 1628.64 860.95 1076.93 1323.34 636.66 356.46 592.70 518.00 661.55 449.33 44 E9b_E10a KnownJunction 0 212.04 325.34 522.42 370.72 296.52 219.08 498.29 346.46 223.81 431.54 1266.69 1498.39 1318.10 1594.33 839.49 1108.85 1322.21 614.46 360.10 653.11 496.57 710.55 497.33 45 E9b_E12a NovelJunction 0 0.00 2.70 0.00 4.03 0.00 11.19 11.88 7.02 3.59 1.61 5.00 5.85 0.00 4.89 15.20 0.00 9.54 0.00 0.00 3.26 0.00 7.47 3.93 46 I9 Intron 0 11.75 16.11 8.02 13.64 13.01 12.00 37.72 21.39 11.96 14.86 24.29 32.41 24.38 21.40 15.33 18.42 26.28 8.48 7.95 21.24 5.60 17.40 12.39 47 I9_AR1 ActiveIntronRegion 0 13.25 18.65 8.01 13.91 11.81 14.42 37.11 23.98 14.24 14.80 28.00 28.04 25.93 21.43 15.68 18.83 30.58 12.45 9.78 28.62 4.35 13.04 13.43 48 I9_SR2 SilentIntronRegion 0 11.99 14.57 9.63 16.62 15.37 12.27 43.24 23.92 13.04 17.76 26.62 38.58 28.79 22.05 15.11 18.95 24.68 7.54 7.02 19.26 6.24 23.12 12.94 49 E10_Aa NovelBoundary 0 17.34 9.47 13.07 18.48 7.22 8.69 17.80 32.12 8.45 5.86 15.00 0.00 27.27 16.89 8.90 18.97 13.65 9.62 0.00 20.90 0.00 8.57 22.02 50 ER10a ExonRegion 0 288.76 370.53 519.36 390.66 397.46 349.68 613.56 334.20 217.12 435.61 1644.88 1490.58 1170.48 1690.88 980.74 1177.46 1584.94 554.73 416.86 683.70 471.62 669.21 471.82 51 E10a_E11a KnownJunction 0 604.77 578.52 532.89 378.11 639.22 432.65 927.15 382.56 221.15 474.38 1391.93 1527.95 1365.33 1824.84 1220.35 1502.77 1429.36 642.78 487.17 729.23 373.57 568.49 569.88 52 ER11a ExonRegion 0 507.11 496.79 467.44 367.45 542.98 448.78 768.35 332.13 216.11 405.09 1572.52 1385.93 1400.40 1641.59 1014.75 1051.13 1555.24 408.94 368.51 603.59 460.48 747.35 430.51 53 E11a_E12a KnownJunction 0 350.80 416.31 458.23 357.36 374.28 287.22 593.24 285.38 182.20 377.17 1044.21 1109.16 949.94 736.13 679.40 809.36 931.46 329.93 268.15 444.93 275.90 641.73 309.95 54 ER12a ExonRegion 0 239.71 312.47 420.85 259.72 266.63 324.69 493.80 244.81 178.51 328.90 819.87 940.27 486.86 1153.89 896.89 678.62 864.39 399.55 221.15 455.05 386.67 442.46 296.66 55 E12_Da KnownBoundary 1 311.76 269.62 189.97 68.46 147.96 105.56 223.77 76.69 34.20 92.19 278.44 118.09 45.78 500.21 368.13 309.83 244.60 322.63 105.04 184.66 213.32 186.09 136.15 56 E12a_E13a KnownJunction 1 148.77 146.36 136.87 99.72 93.55 178.82 181.60 146.88 92.30 166.11 557.61 137.29 74.35 938.97 772.11 410.92 571.67 199.97 141.37 220.64 237.10 239.85 210.76 57 ER12b ExonRegion 0 50.51 99.91 86.30 45.47 44.57 32.32 73.10 47.67 24.40 45.54 81.82 33.13 33.89 128.93 116.03 119.23 91.61 101.69 43.47 80.43 53.07 76.97 56.00 58 E12_Db KnownBoundary 0 24.08 107.55 48.70 53.54 53.40 24.36 43.54 36.35 12.56 36.85 13.85 48.77 70.45 18.84 18.17 19.14 12.44 8.25 13.37 41.03 5.50 49.97 16.22 59 ER12c ExonRegion 0 15.92 69.04 30.42 36.51 37.74 10.11 32.07 18.26 11.08 19.39 22.20 52.33 42.29 13.78 9.36 15.58 17.22 5.21 6.68 39.09 7.44 27.81 13.69 60 E12_Dc NovelBoundary 0 31.41 79.99 27.02 32.23 23.09 13.23 52.38 14.50 12.47 19.39 31.11 37.81 35.39 17.66 13.35 15.38 26.65 11.98 0.00 51.20 2.72 37.72 18.78 61 I12 Intron 0 13.98 45.94 21.93 22.14 38.07 18.89 42.94 16.89 12.33 21.32 22.50 39.89 24.28 15.27 12.33 15.65 21.50 14.96 7.80 38.23 6.92 21.85 14.66 62 I12_AR1 ActiveIntronRegion 0 9.77 46.26 26.05 30.91 47.97 24.69 45.42 22.76 15.61 26.80 35.86 45.61 31.38 15.44 13.01 22.99 31.52 24.10 4.22 52.19 9.36 27.54 20.90 63 I12_SR1 SilentIntronRegion 0 9.57 29.12 24.37 26.10 38.79 20.62 55.29 15.52 14.65 29.71 19.08 39.82 21.16 16.51 12.24 16.93 25.59 12.58 13.23 45.34 6.40 24.45 20.94 64 I12_AR2 ActiveIntronRegion 0 17.82 51.57 18.93 16.09 32.54 15.19 37.56 14.21 9.79 15.57 16.42 36.92 21.53 14.81 12.03 11.26 14.72 10.81 7.96 28.33 5.79 17.93 9.18 65 E13_Aa NovelBoundary 0 10.82 53.48 24.93 18.55 104.33 54.29 58.29 28.14 18.34 30.35 28.59 36.61 20.13 30.26 30.53 20.85 41.33 23.17 7.34 92.68 16.56 25.11 25.18 66 ER13a ExonRegion 0 36.14 75.15 38.58 55.69 72.08 77.28 109.76 45.87 34.42 64.92 106.58 175.62 102.54 111.68 83.66 65.15 82.95 27.48 25.15 66.50 22.65 79.54 32.19