Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TTK Gene 0 33.99 168.86 62.52 30.95 102.23 95.28 163.83 74.59 20.30 127.31 197.77 219.66 107.69 163.10 100.15 122.87 157.23 77.30 25.22 96.25 2.60 23.41 6.33 2 430061 Transcript 0 0.49 8.92 4.43 0.42 18.52 21.74 55.38 2.46 1.65 11.42 15.50 0.83 0.00 10.90 12.16 12.63 16.65 14.18 5.04 8.82 0.25 6.24 0.23 3 369798 Transcript 0 4.23 3.05 3.06 0.00 2.68 0.00 0.66 1.73 0.00 1.15 3.87 0.00 0.00 0.00 4.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 230510 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 1.41 3.39 0.00 0.00 0.00 10.39 14.12 1.15 0.41 0.76 1.93 0.00 0.00 5.96 2.90 2.97 0.00 2.46 0.00 0.00 0.00 2.08 0.98 6 ER1b ExonRegion 1 10.82 102.71 14.29 5.16 154.78 313.76 415.41 17.70 5.78 50.09 187.49 0.85 2.77 132.97 44.25 164.51 138.08 88.43 20.23 57.72 3.97 24.83 11.99 7 E1a_E2a KnownJunction 0 0.00 5.79 4.61 0.00 15.03 10.62 44.56 0.00 1.22 7.92 7.21 0.00 0.00 9.30 13.60 3.76 8.42 9.74 3.95 7.99 0.00 7.35 0.00 8 E1a_E2b KnownJunction 1 16.23 94.85 18.80 14.38 208.91 324.53 347.65 42.92 9.69 99.12 187.21 6.30 0.00 75.40 29.92 199.09 159.98 121.21 20.14 70.82 3.15 7.96 3.84 9 ER2a ExonRegion 0 0.98 12.05 4.24 0.84 22.02 32.87 66.20 4.92 2.09 14.91 23.79 1.67 0.00 12.49 10.71 21.49 24.88 18.62 6.13 9.66 0.51 5.13 0.45 10 ER2b ExonRegion 1 3.67 48.18 18.55 11.25 42.16 54.63 59.46 46.25 15.14 89.93 212.29 85.41 31.86 99.19 33.76 112.11 166.39 74.24 23.66 66.91 3.92 26.10 4.07 11 E2a_E3a KnownJunction 1 7.56 53.61 34.89 14.12 7.64 10.05 9.67 94.06 14.99 142.66 323.03 77.28 33.44 253.11 76.52 220.20 252.55 81.37 26.26 115.88 9.45 40.17 16.48 12 ER3a ExonRegion 0 10.81 183.29 26.27 15.27 99.54 152.43 200.36 58.16 14.95 102.89 186.48 181.22 68.35 138.12 55.36 143.36 165.98 96.81 24.37 112.96 5.88 25.32 9.74 13 E3a_E4a KnownJunction 0 34.52 232.92 37.96 25.17 62.22 101.13 67.92 47.97 13.14 99.98 176.89 257.48 73.70 172.94 75.28 87.84 175.32 97.62 17.13 101.69 5.56 19.10 0.00 14 ER4a ExonRegion 0 12.98 291.85 32.96 18.20 36.04 70.82 107.82 39.37 15.64 89.59 155.75 280.16 102.13 158.60 53.77 118.36 128.52 94.53 18.87 110.78 2.49 17.31 11.03 15 E4a_E5a KnownJunction 1 12.67 323.30 57.04 54.41 77.67 74.56 168.08 57.59 34.98 122.06 154.41 147.65 70.45 127.55 31.15 63.23 141.94 72.29 10.45 98.56 5.44 17.45 7.17 16 ER5a ExonRegion 1 12.64 196.47 37.28 21.94 67.23 62.39 112.19 68.20 18.56 111.36 193.09 208.72 155.75 233.72 56.13 136.59 187.39 104.37 34.07 118.03 0.60 19.81 7.69 17 E5a_E6a KnownJunction 0 16.37 149.38 33.38 25.37 51.10 96.88 133.24 47.19 13.74 105.78 222.53 249.98 110.38 190.54 57.36 126.12 212.15 78.84 17.79 133.20 2.72 32.70 4.35 18 ER6a ExonRegion 1 11.25 169.11 39.02 16.50 85.18 94.91 145.49 59.41 14.80 104.59 240.54 196.44 152.53 221.08 59.44 135.45 229.68 88.32 30.58 96.71 1.25 17.18 4.90 19 E6a_E7a KnownJunction 0 13.71 297.12 39.95 20.84 108.74 76.66 215.03 60.13 9.98 104.06 307.03 225.22 196.25 241.80 83.69 206.19 264.98 100.77 52.71 111.73 3.15 17.02 16.05 20 ER7a ExonRegion 0 16.12 128.00 28.72 18.82 85.48 80.49 154.65 44.54 16.67 93.73 243.49 199.81 99.20 180.14 68.91 164.73 199.73 70.34 42.63 109.15 5.34 22.46 7.32 21 E7a_E8a KnownJunction 1 6.15 91.04 25.69 20.71 70.97 108.63 155.01 51.38 14.93 103.47 227.32 223.87 127.59 196.42 47.96 160.56 224.31 60.23 15.53 83.86 6.18 29.58 4.10 22 ER8a ExonRegion 1 11.74 93.72 28.56 19.81 64.08 72.43 111.12 59.99 18.07 121.80 275.37 238.85 114.88 209.43 57.84 134.84 259.59 76.03 21.53 85.93 2.25 21.19 7.26 23 E8a_E9a KnownJunction 0 23.49 103.01 36.57 17.58 79.12 68.48 144.37 56.64 19.10 131.65 232.95 256.58 162.81 180.12 63.29 104.25 251.43 75.32 30.12 100.29 2.47 27.56 8.02 24 ER9a ExonRegion 0 17.53 78.45 23.67 19.02 109.40 77.69 146.99 48.95 17.66 126.49 202.60 250.86 120.08 173.97 64.82 139.01 195.77 69.40 30.37 95.33 5.23 20.91 7.81 25 E9a_E10a KnownJunction 1 16.89 78.14 20.40 20.51 116.89 86.43 246.30 42.88 16.81 130.79 190.36 224.47 128.24 239.04 58.84 135.01 175.03 38.05 34.35 75.42 0.00 35.88 11.69 26 ER10a ExonRegion 0 18.79 94.82 34.40 18.99 80.96 106.69 184.83 58.11 22.95 127.12 224.06 344.19 173.38 220.24 79.41 172.96 183.12 102.12 28.36 101.27 2.72 24.11 9.28 27 E10a_E11a KnownJunction 1 36.01 144.38 55.29 22.37 105.60 112.15 193.61 67.48 21.21 132.43 207.26 429.29 159.41 209.20 144.39 187.73 156.43 96.34 44.80 100.35 0.00 24.68 4.18 28 ER11a ExonRegion 0 17.05 107.67 51.92 27.26 94.89 86.47 139.18 77.49 20.22 135.59 296.98 324.97 154.93 223.03 95.59 178.81 243.69 122.52 36.02 105.41 1.80 29.23 11.81 29 E11a_E12a KnownJunction 0 24.23 150.50 77.82 48.18 83.28 74.79 149.00 88.84 14.96 158.32 303.08 308.65 123.86 196.72 112.00 221.91 175.88 146.74 49.13 102.01 3.15 9.12 18.35 30 ER12a ExonRegion 0 22.00 188.08 57.60 31.23 90.35 105.91 179.10 66.26 19.74 139.15 289.24 293.33 158.33 237.63 104.95 187.87 227.62 122.29 34.36 109.94 4.02 29.52 6.97 31 E12a_E13a KnownJunction 0 16.60 268.64 44.17 42.72 127.42 131.63 174.58 51.75 17.13 156.77 281.54 224.02 115.25 229.62 102.85 151.93 200.65 122.20 53.27 109.62 2.78 21.37 14.85 32 ER13a ExonRegion 0 22.63 219.64 61.38 41.48 101.26 91.04 155.82 53.85 19.06 137.66 234.90 285.10 125.78 218.55 95.76 155.51 170.97 154.64 35.19 105.29 6.04 20.03 6.29 33 E13a_E14a KnownJunction 0 41.27 219.17 63.69 26.50 125.30 56.16 209.29 71.51 12.73 146.45 228.11 409.03 137.98 247.51 102.23 122.70 217.58 100.61 29.55 101.95 5.44 16.10 0.00 34 ER14a ExonRegion 0 32.04 198.92 69.83 34.79 115.86 92.34 204.05 60.81 17.64 124.80 149.48 226.53 146.10 205.67 100.58 117.32 121.25 96.64 24.80 117.32 1.07 19.07 3.60 35 E14a_E15a KnownJunction 1 17.19 218.71 58.81 42.19 100.17 102.90 192.64 63.66 11.60 128.80 92.29 170.31 155.18 147.63 86.53 84.59 106.03 57.12 16.19 102.52 0.00 30.37 3.67 36 ER15a ExonRegion 0 33.54 225.82 79.28 45.77 83.56 98.02 182.15 68.74 19.11 136.33 168.72 224.26 132.09 148.80 111.29 97.53 105.42 43.54 16.61 121.44 0.71 26.29 3.66 37 E15a_E16a KnownJunction 0 38.97 199.18 68.45 48.94 100.51 101.93 198.25 73.19 29.46 139.52 189.00 193.41 143.33 144.62 131.28 88.78 127.44 41.95 22.40 122.53 0.00 21.43 8.71 38 ER16a ExonRegion 0 36.44 146.06 80.49 46.61 123.28 85.60 163.06 79.14 27.40 148.48 203.56 237.58 135.49 165.77 127.29 104.12 150.21 55.25 15.34 130.43 1.67 20.03 3.84 39 E16a_E17a KnownJunction 0 60.01 129.25 67.71 51.04 131.15 86.48 144.68 88.06 21.61 140.89 164.62 267.84 134.41 137.38 179.99 129.62 122.02 50.57 31.62 124.64 2.72 20.39 0.00 40 ER17a ExonRegion 0 52.46 208.94 88.55 43.50 107.99 95.77 164.27 90.27 28.58 138.79 243.92 228.91 127.61 155.56 137.10 113.92 204.26 69.61 21.43 119.49 1.85 22.20 1.41 41 E17a_E18a KnownJunction 0 51.94 288.37 87.13 59.67 122.92 81.54 220.81 83.75 29.92 110.00 214.95 326.96 88.63 153.87 154.15 108.86 178.68 74.12 25.32 103.74 2.90 26.15 3.41 42 I17_AR2 ActiveIntronRegion 0 8.96 13.83 0.00 0.00 6.82 0.00 4.50 0.00 0.00 0.00 3.29 21.43 22.04 6.66 1.74 0.00 0.00 0.00 0.00 0.00 0.00 1.77 0.00 43 ER18a ExonRegion 0 106.30 291.15 96.29 57.61 158.50 120.80 180.83 118.32 32.91 147.58 216.39 263.40 100.17 140.82 172.46 128.50 167.20 90.15 35.04 117.10 1.50 31.02 7.94 44 E18a_E19a KnownJunction 0 111.28 321.19 133.26 72.42 222.92 135.77 278.49 114.02 29.08 176.81 196.00 265.14 139.28 218.02 247.48 177.90 156.80 60.85 42.64 119.27 2.97 46.35 11.01 45 ER19a ExonRegion 0 90.76 256.70 154.61 54.12 194.57 118.24 258.49 125.56 31.20 174.21 196.84 271.31 115.53 157.81 176.50 116.79 135.82 58.61 26.63 106.08 4.53 32.57 5.62 46 E19a_E20a KnownJunction 0 121.13 447.35 131.10 49.38 314.26 150.37 341.29 115.79 30.27 165.98 182.26 255.98 207.29 166.05 233.02 107.15 124.45 41.37 25.79 111.41 3.15 28.29 7.17 47 ER20a ExonRegion 0 68.30 319.94 116.91 47.11 151.64 104.74 227.15 100.96 26.85 166.68 193.31 203.08 101.97 166.41 170.32 109.58 147.03 56.45 28.37 90.26 2.46 19.12 8.50 48 E20a_E21a KnownJunction 0 79.50 411.64 117.62 49.71 88.37 76.66 229.03 119.28 27.03 160.18 236.64 242.93 76.46 181.24 242.66 142.95 166.43 52.94 34.92 86.74 3.15 17.21 7.26 49 ER21a ExonRegion 0 81.77 196.93 86.23 40.01 116.12 78.52 137.29 113.37 31.68 156.45 217.35 262.20 91.79 150.76 167.12 107.06 163.53 56.68 32.02 79.29 2.56 22.85 6.05 50 E21a_E22a KnownJunction 0 78.61 102.09 72.11 48.11 89.81 42.13 100.16 101.90 23.58 172.29 149.62 264.09 102.27 115.43 194.33 59.64 91.44 46.47 28.61 54.46 3.09 22.23 3.33 51 ER22a ExonRegion 0 48.97 111.60 82.27 34.53 106.95 60.05 128.61 103.29 17.82 137.53 92.88 148.15 55.04 77.75 127.47 52.08 50.96 24.71 13.88 45.99 0.10 21.61 3.01 52 ER22b ExonRegion 0 4.23 3.05 3.06 0.00 2.68 0.00 0.66 1.73 0.00 1.15 3.87 0.00 0.00 0.00 4.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 IG25_SR1 SilentIntergenicRegion 0 12.36 55.83 15.91 10.80 43.49 22.08 40.28 32.83 9.10 51.36 7.80 15.06 5.20 5.26 7.30 6.19 4.29 9.33 4.56 22.70 1.72 6.23 0.00