Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CYB5R4 Gene 0 50.12 60.90 32.37 43.74 64.35 55.02 61.84 47.16 49.49 55.21 157.88 229.12 117.69 114.91 157.38 87.80 101.46 34.01 35.16 64.54 13.76 53.05 32.53 2 369681 Transcript 0 55.01 61.85 32.79 42.06 74.74 60.54 75.03 44.64 56.58 59.03 194.78 322.86 152.32 177.51 184.28 140.04 140.32 45.73 48.78 82.45 20.26 56.76 44.42 3 369679 Transcript 0 0.94 1.59 1.22 1.81 2.68 0.41 1.47 0.00 1.02 0.95 0.43 1.59 1.90 0.30 0.01 1.65 1.10 1.23 1.77 1.90 0.00 0.00 0.65 4 479164 Transcript 0 0.86 0.83 1.20 0.01 0.93 0.01 2.03 0.00 0.00 0.00 2.60 1.95 5.67 2.82 1.75 1.21 3.72 0.00 0.45 1.45 0.00 2.49 2.97 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.68 0.00 0.00 0.00 0.00 6 ER1b ExonRegion 1 12.88 10.11 1.82 3.14 14.62 22.72 28.87 7.77 6.65 8.28 60.02 12.79 4.39 39.58 34.86 30.03 74.10 5.53 8.83 13.08 22.75 9.68 15.22 7 E1a_E2a KnownJunction 1 7.48 12.37 6.77 14.28 7.13 9.31 2.08 28.75 21.35 32.48 219.42 13.50 13.15 87.41 57.23 36.14 234.88 28.85 19.20 29.53 65.55 16.41 10.76 8 ER2a ExonRegion 0 7.52 27.98 26.14 31.53 45.45 55.61 61.29 39.88 58.73 53.56 195.12 139.58 99.80 130.51 122.17 149.53 144.66 87.66 50.04 83.81 20.19 49.19 63.27 9 E2a_E3a KnownJunction 0 10.45 31.18 51.48 52.84 173.94 229.13 263.83 60.79 77.83 70.49 324.08 208.27 150.31 253.69 208.91 115.44 187.10 53.23 52.99 91.79 28.79 79.73 59.84 10 ER3a ExonRegion 0 23.09 50.60 40.52 35.69 52.77 67.65 75.06 48.33 70.93 66.58 261.53 296.08 137.40 195.52 150.64 119.00 187.37 69.32 55.67 102.19 19.88 62.34 49.11 11 E3a_E4a KnownJunction 1 37.41 55.78 42.61 22.08 45.84 37.42 32.50 54.67 79.69 52.35 208.84 400.63 61.20 168.93 196.68 147.14 165.78 84.73 80.47 133.84 37.56 65.76 53.61 12 ER4a ExonRegion 0 56.76 44.02 35.73 31.43 47.25 43.81 49.31 53.90 72.75 57.79 276.33 338.49 139.16 205.59 163.71 160.49 223.74 69.90 63.86 108.41 38.81 74.57 45.77 13 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E4a_E6a KnownJunction 0 77.20 50.45 29.77 31.43 41.43 41.45 62.27 42.68 68.40 55.71 304.50 390.43 156.65 259.35 232.77 178.59 232.35 66.62 83.39 104.19 19.83 75.81 56.43 15 ER5a ExonRegion 0 1.89 3.18 2.44 3.62 5.36 0.82 2.95 0.00 2.05 1.90 0.86 3.18 3.81 0.60 0.01 3.31 2.21 2.45 3.55 3.81 0.00 0.00 1.31 16 ER6a ExonRegion 0 39.70 45.23 32.01 30.81 58.54 41.29 71.41 43.47 72.83 54.91 290.87 356.85 183.05 245.68 183.39 178.87 258.17 65.29 75.29 116.18 25.31 66.80 49.83 17 E6a_E7a KnownJunction 0 39.78 49.99 24.90 26.24 92.87 50.99 89.34 36.39 50.43 41.37 226.90 365.07 196.09 253.17 138.58 147.91 226.55 46.72 94.31 130.01 31.82 47.27 54.12 18 ER7a ExonRegion 0 26.82 45.54 33.00 31.66 60.75 44.16 62.73 53.07 60.82 64.30 248.46 405.05 176.53 222.05 166.32 167.61 222.46 70.34 78.85 105.69 34.79 50.96 61.48 19 E7a_E8a KnownJunction 0 32.75 58.54 37.17 33.70 49.41 41.23 30.12 54.09 66.55 69.12 231.74 394.18 117.20 202.66 179.49 212.94 188.78 77.89 48.85 118.69 32.99 57.62 62.14 20 ER8a ExonRegion 0 26.06 46.49 34.75 35.25 54.39 48.37 64.55 39.72 65.52 60.49 207.12 312.47 114.26 190.86 160.52 149.27 161.00 56.26 34.65 80.74 19.00 60.10 48.20 21 E8a_E9a KnownJunction 0 35.49 48.94 22.47 42.29 76.57 61.56 93.01 45.84 56.91 60.47 177.52 274.44 131.00 150.39 173.06 165.60 106.40 24.21 40.00 78.17 20.08 64.23 22.88 22 ER9a ExonRegion 0 56.25 57.37 25.97 41.03 106.46 75.19 90.80 47.15 59.35 75.13 213.19 284.87 163.45 166.80 152.90 145.10 129.89 40.14 67.10 85.74 11.70 56.03 36.08 23 E9a_E10a KnownJunction 1 68.60 50.65 35.60 33.26 94.74 87.11 107.14 30.48 39.67 51.52 155.62 449.25 245.60 169.76 148.34 130.31 91.91 32.62 11.86 58.55 20.14 35.15 53.27 24 ER10a ExonRegion 1 65.87 58.91 34.79 46.01 95.76 80.30 99.34 39.34 55.99 63.22 156.86 437.54 176.09 202.82 186.74 159.59 98.63 45.86 32.72 71.76 26.31 48.11 71.19 25 E10a_E11a KnownJunction 1 83.20 69.46 23.36 46.31 94.48 84.27 111.78 37.75 54.37 52.22 137.98 401.83 97.07 240.39 253.17 178.93 122.95 44.31 66.54 86.99 20.76 65.52 73.58 26 ER11a ExonRegion 0 52.26 57.29 37.11 58.79 77.53 70.91 77.34 48.23 62.98 53.97 225.85 253.47 169.03 192.99 205.61 147.62 148.70 56.32 56.09 84.86 22.57 63.88 60.31 27 E11a_E14a KnownJunction 0 43.56 64.66 28.24 53.37 47.96 53.26 46.42 37.42 54.25 49.88 189.47 232.58 264.76 208.43 150.44 119.37 168.21 53.97 30.21 47.87 26.56 63.25 23.30 28 E12_Aa NovelBoundary 0 17.34 8.49 8.93 22.18 18.76 29.02 25.70 9.61 14.81 13.91 12.42 34.96 6.17 4.41 10.26 24.52 51.89 6.09 11.86 2.62 2.35 6.25 0.00 29 ER12a ExonRegion 0 3.43 3.29 0.51 0.00 2.17 0.00 1.39 0.00 0.00 0.00 6.17 5.84 2.90 6.19 1.66 4.62 3.93 0.00 0.00 0.00 0.00 2.55 1.40 30 E12a_E13a KnownJunction 0 0.00 0.00 2.60 0.00 0.00 0.00 1.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 3.12 4.35 31 E12a_E14a NovelJunction 0 21.26 13.16 3.40 9.16 12.73 2.90 20.45 10.02 16.72 7.31 29.95 0.00 0.00 0.00 9.77 7.60 18.33 2.16 19.20 3.26 0.00 6.00 7.77 32 ER13a ExonRegion 0 0.00 0.04 1.70 0.03 1.56 0.04 4.95 0.00 0.00 0.00 2.04 1.95 13.76 0.73 0.89 0.23 2.54 0.00 1.79 2.88 0.00 1.17 2.65 33 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.21 0.00 6.01 4.36 4.45 0.00 3.65 0.00 0.00 2.94 0.00 3.12 3.50 34 ER14a ExonRegion 0 69.33 99.16 35.27 51.85 74.58 77.50 91.05 51.90 65.28 55.14 266.74 278.44 192.46 178.09 205.21 143.82 169.42 56.64 63.73 66.74 29.20 63.82 69.65 35 E14a_E15a KnownJunction 0 78.83 57.95 50.59 69.26 61.71 86.83 107.45 54.59 80.99 59.26 257.22 330.86 209.08 193.07 238.21 130.31 176.90 56.92 62.40 97.22 22.49 53.52 102.69 36 ER15a ExonRegion 0 67.85 69.35 46.64 66.34 75.92 74.48 83.09 68.37 65.15 70.09 242.11 335.15 209.70 184.52 201.42 126.46 144.44 48.49 44.64 84.81 16.79 68.74 50.77 37 E15_Da NovelBoundary 0 0.00 2.63 9.88 6.16 28.52 5.22 20.98 11.42 26.94 5.16 11.42 70.82 13.47 7.42 0.00 0.00 8.42 4.85 4.80 14.00 0.00 8.70 0.00 38 E15a_E16a KnownJunction 0 97.28 77.88 42.34 45.72 66.21 85.80 69.20 46.37 43.81 70.73 197.89 308.05 225.15 123.79 193.83 73.14 105.10 17.82 56.94 54.07 5.19 72.87 42.85 39 E16_Aa NovelBoundary 0 14.89 26.05 5.50 10.55 0.00 5.79 23.27 12.86 10.27 8.00 0.00 19.21 19.97 10.77 11.50 4.36 3.93 0.00 4.80 2.49 0.00 2.76 0.00 40 ER16a ExonRegion 0 92.44 112.60 39.93 70.05 90.66 91.45 84.35 60.12 49.45 79.10 216.72 331.42 151.79 140.06 201.07 87.23 127.88 35.40 37.00 74.74 10.08 68.04 33.82 41 E16a_E17a KnownJunction 0 144.47 141.82 31.10 61.56 86.67 102.72 113.32 57.75 51.30 83.35 219.79 304.90 235.37 188.89 242.91 87.50 127.44 25.70 51.67 62.32 10.32 89.65 32.86 42 ER17a ExonRegion 0 144.51 95.23 42.87 66.25 96.79 100.14 105.29 69.93 64.07 83.55 203.80 341.83 189.70 138.80 216.33 97.94 141.56 26.48 53.46 66.54 8.46 70.74 37.47 43 E17a_E18a KnownJunction 0 133.51 88.93 42.78 71.25 63.92 58.49 85.41 72.25 78.73 89.75 245.06 338.51 147.23 134.21 226.96 95.70 150.54 30.72 41.13 96.51 5.44 85.24 42.94 44 ER18a ExonRegion 0 109.35 118.89 43.61 69.25 99.28 94.75 98.99 71.02 75.25 98.41 221.89 345.97 151.64 139.11 272.31 99.30 142.19 30.09 53.91 103.38 14.30 84.20 36.97 45 E18_Da KnownBoundary 0 82.98 177.01 51.71 80.88 151.36 105.00 109.35 66.05 70.75 116.18 210.74 384.28 186.84 150.86 223.75 91.17 111.92 28.44 50.64 97.73 17.42 97.97 47.29 46 ER18b ExonRegion 0 87.60 136.51 61.03 76.93 134.03 124.89 110.39 67.95 64.27 88.63 243.83 357.31 173.21 124.27 249.67 116.19 119.33 43.05 48.77 80.73 16.11 66.12 39.22 47 E18_Db NovelBoundary 0 6.74 18.22 5.50 6.96 8.23 8.18 8.79 18.81 14.00 4.49 6.53 6.15 0.00 0.00 0.00 8.12 12.34 5.14 4.42 8.69 2.97 0.00 3.59 48 E18b_E19a KnownJunction 1 134.32 124.91 48.52 62.80 96.35 69.56 94.24 61.86 66.87 86.82 183.57 298.45 100.16 104.01 324.50 124.41 63.86 36.11 37.93 78.68 11.18 68.03 26.46 49 E19_Aa NovelBoundary 0 19.34 46.18 4.58 4.13 20.29 5.68 2.25 5.09 2.92 5.00 2.16 12.60 7.14 4.89 0.00 0.00 0.00 0.00 0.00 3.26 2.35 3.12 0.00 50 ER19a ExonRegion 1 65.66 86.53 48.70 65.21 89.35 54.65 64.61 73.46 62.62 75.67 117.79 274.86 125.30 84.12 227.32 58.40 46.30 17.77 22.09 72.84 5.23 76.10 16.68 51 IG50_SR1 SilentIntergenicRegion 0 4.90 11.45 4.28 9.81 18.73 12.08 12.65 9.05 16.59 13.29 14.89 22.46 17.15 10.92 2.02 7.20 9.48 22.00 6.98 29.75 3.06 11.82 9.00 52 IG50_AR1 ActiveIntergenicRegion 0 8.26 24.59 4.26 11.70 16.50 11.68 17.03 17.46 19.43 21.23 16.01 30.40 30.32 9.08 6.89 9.46 10.42 12.25 10.83 28.73 1.87 16.06 12.57