Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP5-1120P11.1 Gene 0 0.97 2.14 7.64 5.29 4.22 19.23 8.80 4.18 1.93 8.71 3.71 0.99 1.80 0.83 9.26 1.70 6.71 1.16 4.37 3.64 0.80 2.33 5.37 2 422059 Transcript 0 0.76 1.51 2.75 1.42 1.75 7.97 4.40 4.30 0.71 3.78 3.00 0.51 0.83 0.66 7.78 1.49 7.64 0.59 1.98 2.24 0.88 1.22 2.55 3 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 Ix Intron 0 0.12 0.12 0.26 0.00 0.38 0.05 0.00 0.07 0.11 0.20 4.64 0.20 0.22 1.78 48.92 6.12 55.90 0.00 0.09 0.00 0.13 0.00 0.34 6 Ix_AR1 ActiveIntronRegion 0 0.00 0.17 0.15 0.00 0.22 0.15 0.00 0.21 0.30 0.42 5.34 0.00 0.63 2.68 69.62 7.25 87.27 0.00 0.00 0.00 0.00 0.00 0.00 7 E2_Aa NovelBoundary 0 0.00 0.00 0.00 2.06 0.00 0.00 4.24 0.00 0.00 1.67 14.42 0.00 6.82 7.18 226.84 18.03 181.49 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 1.81 4.68 0.00 3.55 0.00 1.52 5.17 0.00 0.00 0.00 7.25 0.00 9.14 0.00 0.00 0.00 0.00 0.00 2.02 9 E2_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.64 6.30 0.00 2.47 70.71 0.00 173.63 0.00 4.80 0.00 0.00 0.00 4.27 10 E2a_E3a KnownJunction 0 0.00 0.00 1.18 0.00 0.00 2.38 0.00 6.57 0.00 3.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E2a_E4a NovelJunction 0 0.00 0.00 0.00 2.06 0.00 15.84 15.68 5.13 0.00 7.25 2.68 0.00 0.00 2.47 0.00 4.36 4.30 0.00 0.00 0.00 0.00 2.82 0.00 12 Ix Intron 0 0.00 0.00 0.36 0.00 0.00 1.09 0.26 0.00 0.36 0.34 5.35 0.00 0.00 1.85 39.50 5.88 48.29 0.00 0.63 0.42 0.00 0.00 0.58 13 Ix_AR1 ActiveIntronRegion 0 0.00 0.00 0.36 0.00 0.00 1.10 0.26 0.00 0.37 0.34 5.39 0.00 0.00 1.87 39.81 5.92 48.65 0.00 0.63 0.42 0.00 0.00 0.59 14 E3_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 2.27 0.00 0.00 0.00 0.00 4.69 0.00 0.00 2.41 33.38 7.86 75.55 0.00 0.00 0.00 0.00 0.00 0.00 15 ER3a ExonRegion 0 0.00 0.07 0.48 0.00 0.00 1.88 1.10 3.46 0.00 1.93 1.58 0.00 0.00 1.56 21.93 3.64 29.52 1.12 0.00 0.87 0.00 0.00 1.20 16 E3_Da NovelBoundary 0 0.00 0.00 1.33 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 2.18 22.25 0.00 39.08 0.00 0.00 0.00 0.00 0.00 0.00 17 E3a_E4a KnownJunction 0 0.00 0.00 1.71 0.00 0.00 11.47 0.00 6.04 0.00 2.26 0.00 0.00 0.00 0.00 4.82 0.00 0.00 0.00 3.48 0.00 0.00 0.00 0.00 18 ER4a ExonRegion 0 6.66 9.13 10.89 4.63 9.85 19.78 16.01 6.86 4.52 10.74 15.51 3.87 6.08 4.12 25.22 9.36 18.84 3.23 10.05 14.23 4.43 5.64 10.70 19 E4_Da NovelBoundary 0 13.93 13.02 20.05 16.61 31.15 48.72 32.64 26.74 23.32 31.75 2.37 0.00 19.48 4.89 11.37 32.30 41.80 30.22 13.27 32.66 11.92 8.70 17.24 20 E4a_E5a KnownJunction 0 0.00 3.09 1.80 1.53 0.00 8.46 13.16 8.05 0.00 4.41 2.11 0.00 0.00 0.00 4.45 0.00 8.04 0.00 0.00 2.62 3.15 3.12 3.59 21 E5_Aa NovelBoundary 0 0.00 0.00 7.27 5.53 11.71 24.30 5.92 0.00 3.04 5.24 2.21 0.00 0.00 0.00 10.75 0.00 4.39 2.57 9.13 3.20 0.00 0.00 13.91 22 ER5a ExonRegion 0 0.14 1.33 8.71 6.60 4.04 23.07 9.37 4.18 1.89 10.06 1.94 0.69 1.42 0.29 6.33 0.38 3.24 0.95 4.30 2.45 0.32 2.25 5.40 23 IG5_AR14 ActiveIntergenicRegion 0 0.73 0.35 7.65 3.12 13.78 4.39 2.73 10.74 24.28 54.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.90 1.09 0.00 0.00 0.00 0.00 24 IG5_SR8 SilentIntergenicRegion 0 1.04 4.57 15.32 3.27 14.74 5.49 2.41 17.50 29.05 79.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.52 1.68 0.20 0.00 0.00 0.13 25 IG5_AR13 ActiveIntergenicRegion 0 0.27 3.14 13.68 3.47 12.45 2.00 1.69 13.59 17.77 48.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.60 0.00 0.00 0.00 0.00 26 IG5_AR11 ActiveIntergenicRegion 0 0.00 1.01 1.81 1.58 6.35 0.30 0.44 4.70 3.61 17.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 IG5_AR10 ActiveIntergenicRegion 0 0.00 0.86 0.00 0.62 0.00 2.34 1.52 3.46 4.98 15.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.35 0.00 0.00 0.00 0.00 28 IG5_AR9 ActiveIntergenicRegion 0 3.12 2.53 8.96 1.54 18.17 3.32 2.40 5.28 4.24 26.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.75 0.00 0.00 0.00 0.00