Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP3-475N16.1 Gene 0 54.21 24.13 39.49 25.48 41.81 45.18 23.27 32.12 23.91 32.48 24.10 13.08 18.77 23.49 38.08 28.13 38.68 37.81 36.85 36.60 8.61 12.36 20.07 2 450671 Transcript 0 33.18 14.41 23.53 16.50 24.68 27.44 13.24 18.55 14.61 18.66 15.07 7.73 12.81 15.20 23.00 16.98 23.18 22.19 19.98 20.77 6.47 7.16 11.20 3 ER1a ExonRegion 0 54.76 21.27 42.62 21.62 33.71 32.46 20.82 34.84 30.63 38.56 27.59 10.48 15.63 20.27 36.09 25.60 37.27 32.99 42.09 44.19 4.63 13.53 19.07 4 E1_Da NovelBoundary 1 102.61 86.70 79.24 35.83 50.59 99.83 31.22 58.94 34.58 73.20 30.22 6.30 21.43 24.07 59.46 76.99 25.43 96.17 138.64 120.36 15.01 20.70 45.07 5 E1a_E2a KnownJunction 0 3.78 0.00 0.00 0.00 0.00 2.33 0.00 0.00 1.79 4.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 0 29.91 33.11 29.17 24.33 20.55 22.54 14.24 24.53 18.66 39.91 18.41 9.83 9.49 22.16 35.23 22.83 30.42 33.86 31.32 39.87 6.77 15.36 23.46 7 Ix_SR1 SilentIntronRegion 0 30.28 33.52 29.53 24.62 20.80 22.81 14.41 24.83 18.89 40.39 18.63 9.95 9.61 22.41 35.65 23.11 30.79 34.26 31.70 40.35 6.85 15.55 23.74 8 E2_Aa NovelBoundary 0 12.08 90.77 63.10 31.53 24.36 85.41 47.08 41.32 32.75 54.66 12.00 13.35 18.51 26.31 50.31 29.22 21.97 67.90 31.34 50.17 17.67 6.00 3.67 9 ER2a ExonRegion 0 83.04 30.59 50.53 36.72 70.68 52.60 37.37 46.01 26.28 46.50 29.10 10.29 15.29 25.54 38.05 46.89 45.37 66.33 57.30 48.33 13.32 18.42 30.58 10 E2_Da NovelBoundary 0 37.49 39.34 95.15 67.12 35.65 26.86 15.24 62.35 21.47 64.47 29.38 6.30 0.00 35.26 93.45 28.71 78.73 110.22 103.06 71.91 17.42 22.04 57.79 11 E2a_E3a KnownJunction 0 6.30 0.00 0.00 11.62 0.00 5.34 1.81 4.48 3.96 1.67 9.00 0.00 6.82 4.59 4.45 4.36 8.51 1.91 0.00 3.26 3.15 0.00 0.00 12 Ix Intron 0 43.72 47.70 48.72 29.28 27.06 44.20 25.07 34.92 23.76 54.43 27.04 2.19 9.14 16.65 42.53 32.00 40.49 61.67 72.69 42.58 9.01 11.66 21.49 13 Ix_SR1 SilentIntronRegion 0 43.91 47.90 48.93 29.41 27.18 44.38 25.18 35.07 23.86 54.66 27.13 2.20 9.18 16.72 42.68 32.14 40.65 61.93 72.99 42.76 9.05 11.71 21.58 14 E3_Aa NovelBoundary 0 55.79 52.75 82.23 32.80 52.38 82.96 39.48 35.90 25.67 43.81 14.11 6.30 0.00 12.89 30.41 25.21 51.89 35.28 17.13 54.59 11.18 12.80 15.71 15 ER3a ExonRegion 0 27.65 23.65 40.60 19.94 30.57 24.95 11.59 17.64 17.04 22.01 13.77 15.64 18.67 20.38 46.86 26.22 33.23 26.84 18.03 30.79 8.48 13.88 11.64 16 E3_Da NovelBoundary 0 61.94 52.95 60.61 26.57 48.05 77.34 26.32 44.48 23.50 43.17 34.80 12.30 13.64 20.25 52.17 31.62 41.33 45.10 52.90 53.88 24.90 24.80 15.02 17 E3a_E4a KnownJunction 0 13.19 2.76 6.59 1.53 3.90 5.68 0.00 2.30 6.02 0.00 5.05 0.00 6.82 7.53 0.00 0.00 0.00 1.82 0.00 0.00 5.68 0.00 0.00 18 Ix Intron 0 86.69 56.15 40.21 19.70 47.32 45.82 25.08 34.39 15.53 38.42 30.21 7.85 11.08 18.54 33.88 29.84 31.26 41.49 51.24 31.56 10.81 14.03 22.11 19 Ix_SR1 SilentIntronRegion 0 86.69 56.15 40.21 19.70 47.32 45.82 25.08 34.39 15.53 38.42 30.21 7.85 11.08 18.54 33.88 29.84 31.26 41.49 51.24 31.56 10.81 14.03 22.11 20 I3 Intron 0 38.67 34.05 9.03 20.10 48.90 34.90 26.20 17.65 7.36 14.64 8.09 16.53 16.49 5.65 12.47 10.75 10.68 7.17 15.15 12.15 5.45 2.78 8.94 21 I3_AR1 ActiveIntronRegion 0 6.92 9.46 5.56 6.34 23.88 18.48 17.62 13.30 7.79 17.51 2.83 6.49 14.97 4.31 0.00 1.71 0.00 1.56 8.33 7.69 1.78 0.96 5.31 22 I3_SR1 SilentIntronRegion 0 42.08 36.70 9.41 21.58 51.59 36.66 27.12 18.11 7.31 14.34 8.66 17.60 16.65 5.80 13.81 11.72 11.83 7.77 15.89 12.63 5.85 2.97 9.33 23 E4_Aa NovelBoundary 0 21.26 12.17 33.74 23.31 6.88 17.15 7.82 40.79 13.19 31.35 12.27 0.00 13.31 10.95 14.22 24.44 16.08 61.89 9.60 16.94 6.30 10.59 4.35 24 ER4a ExonRegion 0 43.54 22.58 24.39 24.08 33.87 68.72 21.08 24.55 16.53 17.63 20.99 17.72 26.41 28.07 35.54 15.82 37.91 25.43 22.44 18.84 10.00 4.30 17.11 25 IG23_SR1 SilentIntergenicRegion 0 17.22 13.18 16.44 15.07 36.04 22.72 14.97 13.54 6.89 9.97 9.60 4.95 8.31 9.24 12.22 7.07 12.13 5.83 16.75 13.64 2.85 3.60 9.31 26 IG23_AR1 ActiveIntergenicRegion 0 10.28 16.00 10.17 8.46 16.44 20.17 11.93 15.47 11.06 13.02 3.62 8.61 13.16 3.40 6.84 6.37 12.25 4.73 8.19 12.21 1.57 2.38 5.03