Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-203B9.1 Gene 0 2.60 2.97 3.09 2.73 2.19 1.71 8.97 5.57 2.80 3.49 3.73 6.31 4.30 3.10 6.78 5.21 4.63 1.50 2.61 5.10 5.28 3.89 4.29 2 416069 Transcript 0 1.15 1.38 1.30 1.45 1.17 0.98 4.14 2.52 1.55 1.77 1.93 2.26 2.75 1.19 2.57 3.37 2.37 0.72 1.12 2.49 2.13 1.58 1.74 3 ER1a ExonRegion 0 0.67 1.28 0.00 0.32 0.84 2.03 2.70 3.25 1.16 0.55 6.59 0.00 3.33 3.57 4.42 5.52 6.25 1.16 3.02 3.38 9.74 8.55 6.49 4 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 6.33 0.00 0.00 7.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER2a ExonRegion 0 1.06 0.06 0.99 0.04 0.00 0.00 1.55 0.00 1.00 1.82 0.41 0.00 1.15 0.38 0.00 1.99 1.79 0.02 0.00 2.24 1.20 0.00 0.00 6 E2_Da NovelBoundary 0 11.04 0.00 1.60 0.00 0.00 0.00 1.94 0.00 5.12 2.93 0.00 6.30 0.00 0.00 0.00 0.00 0.00 5.02 0.00 2.88 5.87 3.12 4.35 7 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 Ix_SR3 SilentIntronRegion 0 2.12 23.50 7.35 18.93 21.41 4.48 11.62 9.79 11.80 10.19 1.29 12.99 14.59 1.62 0.00 5.94 0.00 3.70 0.00 13.00 2.20 14.58 2.94 9 Ix_AR4 ActiveIntronRegion 0 2.79 17.75 8.58 24.22 30.16 1.42 14.74 10.84 12.80 16.37 0.00 20.07 11.73 1.48 0.00 3.92 0.00 5.29 0.00 10.35 2.20 8.71 4.81 10 Ix_AR2 ActiveIntronRegion 0 8.18 7.55 3.00 11.90 2.79 0.20 8.80 9.30 14.00 14.48 1.93 9.04 5.84 0.18 0.00 2.11 3.08 10.02 3.04 7.75 2.79 0.74 0.72 11 Ix_AR1 ActiveIntronRegion 0 1.90 12.37 1.35 9.79 0.00 4.83 8.02 7.97 14.01 12.43 0.08 11.31 13.88 2.55 1.95 1.09 12.40 1.96 2.73 10.46 4.59 4.17 2.34 12 Ix Intron 0 9.26 28.23 7.40 27.52 16.97 16.24 25.46 17.91 24.74 19.92 9.76 30.02 29.48 9.28 6.94 14.37 12.99 11.34 9.03 30.28 9.85 20.54 13.47 13 Ix_AR12 ActiveIntronRegion 0 26.12 42.19 19.81 38.56 36.66 16.66 26.22 26.90 29.21 28.98 11.27 15.20 16.94 12.48 12.27 10.88 8.95 13.48 11.23 26.26 5.68 25.43 11.95 14 Ix_SR5 SilentIntronRegion 0 15.98 26.32 6.47 28.79 17.32 17.80 20.40 21.83 17.30 21.33 3.87 14.75 26.14 7.77 7.91 6.41 4.07 4.40 5.89 21.31 5.76 26.32 9.05 15 Ix_AR11 ActiveIntronRegion 0 11.51 26.75 5.80 32.35 23.15 24.85 31.42 26.52 35.53 27.36 16.32 42.10 37.12 11.76 5.31 17.32 19.12 13.10 8.21 41.13 17.13 24.11 18.13 16 Ix_SR4 SilentIntronRegion 0 12.60 34.51 5.46 29.60 18.38 22.22 30.68 17.13 34.74 23.46 14.93 30.91 35.72 11.03 9.08 20.29 19.71 17.30 12.33 33.99 14.14 26.03 16.84 17 Ix_AR10 ActiveIntronRegion 0 9.57 18.82 3.75 14.06 8.50 11.51 22.23 9.71 18.04 16.35 7.15 35.71 25.04 5.28 3.71 16.13 12.70 7.80 6.54 23.66 6.71 18.43 11.64 18 Ix_SR3 SilentIntronRegion 0 5.89 26.87 9.52 32.51 21.56 19.84 35.56 19.48 44.64 32.11 7.44 41.86 45.23 11.42 5.52 24.65 13.19 14.27 15.47 42.64 10.35 31.76 12.98 19 Ix_AR9 ActiveIntronRegion 0 5.17 40.00 6.84 34.36 17.82 17.36 29.01 24.99 39.80 26.80 12.55 28.59 42.08 12.24 3.25 15.27 9.74 18.30 12.17 43.93 13.52 24.00 18.16 20 Ix_SR2 SilentIntronRegion 0 1.56 9.02 0.00 0.00 3.96 8.13 10.76 0.00 0.00 0.00 4.29 25.60 0.00 4.94 8.83 6.59 17.08 0.00 0.00 12.55 8.11 18.48 4.34 21 Ix_AR8 ActiveIntronRegion 0 3.80 21.79 3.43 20.14 6.50 1.83 10.21 9.91 4.51 5.24 2.96 22.71 27.37 0.60 2.37 2.91 16.37 3.17 3.32 15.46 3.33 7.06 4.49 22 Ix_SR1 SilentIntronRegion 0 4.50 24.32 6.97 24.73 11.99 11.80 20.84 12.88 16.12 12.30 7.17 28.77 25.79 6.97 8.72 13.21 13.02 8.57 7.85 25.23 7.09 15.57 10.53 23 Ix_AR7 ActiveIntronRegion 0 2.12 22.37 8.85 21.81 24.68 28.32 41.19 5.19 21.13 10.58 10.95 66.39 48.98 15.52 7.74 2.97 8.80 6.57 6.72 41.61 13.22 17.36 22.51 24 Ix_AR6 ActiveIntronRegion 0 2.12 33.41 6.83 18.11 24.08 27.51 46.91 5.93 20.82 9.99 11.05 50.72 48.91 11.83 2.90 8.49 9.90 3.96 9.56 32.52 12.91 17.26 23.07 25 Ix_AR5 ActiveIntronRegion 0 2.12 39.99 6.13 16.81 22.30 26.90 48.32 5.19 18.53 9.56 9.99 35.36 36.74 8.39 4.35 12.88 9.90 5.54 9.56 26.60 11.02 18.75 18.11 26 Ix_AR4 ActiveIntronRegion 0 0.49 42.16 6.41 20.18 16.36 17.70 47.82 4.39 18.57 9.04 9.52 14.82 17.86 7.18 11.72 23.43 12.70 6.75 9.56 17.68 5.76 14.18 14.46 27 Ix_AR3 ActiveIntronRegion 0 3.93 41.06 6.59 19.08 10.45 10.22 35.31 5.60 14.29 17.37 8.84 15.67 17.64 5.96 8.70 23.49 15.72 9.15 4.40 14.18 1.68 8.04 14.12 28 Ix_AR2 ActiveIntronRegion 0 10.20 34.20 4.90 17.72 8.51 9.17 40.08 6.91 11.12 18.35 7.73 30.31 38.37 7.83 2.90 9.19 16.50 9.24 6.37 20.31 1.00 10.61 15.75 29 Ix_AR1 ActiveIntronRegion 0 6.63 23.45 7.61 20.57 6.64 10.04 21.88 8.37 7.76 12.13 5.54 28.14 19.05 10.32 3.87 11.32 8.22 14.43 11.04 20.68 8.09 9.37 15.47 30 Ix Intron 0 34.40 34.57 16.57 36.45 35.70 21.86 35.87 28.79 17.83 20.48 17.41 40.66 44.00 19.11 15.90 17.92 16.10 8.62 6.47 22.62 8.95 21.17 10.54 31 Ix_SR1 SilentIntronRegion 0 34.49 34.67 16.62 36.55 35.80 21.92 35.96 28.86 17.87 20.54 17.46 40.76 44.12 19.16 15.95 17.96 16.14 8.64 6.49 22.68 8.97 21.22 10.57 32 Ix_AR2 ActiveIntronRegion 0 13.55 26.72 9.11 14.87 13.87 1.82 9.10 11.44 3.39 4.52 2.02 8.53 11.52 1.65 1.73 7.13 2.45 2.90 2.37 8.79 1.64 2.06 0.00 33 Ix_SR2 SilentIntronRegion 0 9.95 19.32 6.07 16.73 10.45 2.13 16.29 7.48 4.18 3.61 2.76 25.07 18.02 2.28 3.51 4.39 4.71 4.23 2.35 18.30 2.09 6.05 1.71 34 Ix_AR1 ActiveIntronRegion 0 7.14 8.39 2.51 12.69 11.04 3.67 22.51 3.54 2.30 2.99 2.17 8.47 20.05 2.87 2.82 7.43 2.48 2.54 5.18 12.50 1.65 1.82 5.14 35 Ix Intron 0 3.01 3.89 6.18 5.59 2.36 1.08 8.90 3.54 1.45 2.94 2.66 13.20 21.20 2.79 2.44 5.69 5.35 5.69 3.13 14.52 2.06 1.94 3.60 36 Ix_SR1 SilentIntronRegion 0 3.02 3.90 6.20 5.60 2.37 1.08 8.93 3.55 1.45 2.94 2.66 13.24 21.26 2.79 2.44 5.71 5.36 5.70 3.14 14.56 2.06 1.95 3.61 37 Ix_AR1 ActiveIntronRegion 0 5.86 8.60 7.13 8.48 5.94 2.31 16.56 8.13 7.65 5.68 3.16 2.78 2.29 1.74 3.59 4.87 6.70 3.96 1.20 6.83 1.38 3.94 3.10 38 E3_Aa NovelBoundary 0 3.33 0.00 15.94 11.42 9.85 0.00 18.99 10.80 9.40 5.94 0.00 0.00 0.00 0.00 0.00 16.24 7.48 5.72 0.00 14.25 0.00 0.00 9.82 39 ER3a ExonRegion 0 1.08 2.99 0.86 4.76 3.79 3.46 7.50 4.98 4.37 3.23 0.98 0.00 1.56 0.00 0.97 1.40 4.68 1.73 1.59 4.06 0.10 0.98 1.39 40 E3_Da NovelBoundary 0 9.11 6.58 5.00 11.09 7.81 4.83 27.03 8.95 9.06 4.46 0.00 0.00 0.00 2.47 0.00 7.26 0.00 0.00 3.95 23.91 0.00 5.76 0.00 41 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 E4_Aa NovelBoundary 0 3.48 3.09 16.23 14.88 7.47 0.00 26.81 11.95 15.28 16.95 2.68 0.00 0.00 2.47 4.45 11.28 3.83 7.79 0.00 12.27 0.00 5.88 11.69 43 ER4a ExonRegion 0 5.27 5.31 7.23 5.06 3.53 1.34 17.26 9.40 4.31 6.76 2.82 15.82 6.91 4.37 12.61 6.97 3.87 2.16 3.24 7.78 3.84 1.53 4.30