Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AL109615.1 Gene 0 4.35 18.62 19.44 31.51 32.99 35.62 13.60 38.02 21.66 30.97 0.72 3.38 2.89 5.84 4.75 4.44 1.23 40.33 24.40 29.02 4.53 5.06 4.94 2 393859 Transcript 0 1.67 7.15 9.85 23.82 12.71 13.74 5.22 31.67 15.27 21.38 0.28 1.30 1.11 2.24 1.82 1.71 0.47 24.63 9.42 11.22 1.74 1.99 1.90 3 IG8 Intergenic 0 4.84 16.92 13.97 20.42 24.79 19.62 17.56 17.55 17.09 24.18 1.38 3.85 2.65 4.82 4.78 4.12 5.12 36.22 23.12 30.87 5.12 2.43 7.52 4 IG8_SR7 SilentIntergenicRegion 0 5.21 10.24 11.45 17.07 20.55 11.70 15.48 15.89 17.49 21.71 1.57 2.78 2.08 4.87 6.15 3.87 5.11 33.35 24.04 30.41 4.98 1.54 7.89 5 IG8_AR11 ActiveIntergenicRegion 0 5.07 13.50 19.87 24.71 24.61 14.63 15.76 24.50 16.99 27.89 0.59 5.38 1.57 5.97 5.19 4.84 6.38 51.90 30.03 37.87 5.71 2.10 13.75 6 IG8_SR6 SilentIntergenicRegion 0 6.00 27.70 15.62 24.80 25.58 16.11 21.82 19.18 21.14 27.99 1.75 5.21 4.46 3.81 4.86 5.29 5.11 40.66 26.41 35.47 4.91 3.34 8.34 7 IG8_AR10 ActiveIntergenicRegion 0 3.31 15.89 9.69 16.70 22.98 9.72 11.73 14.47 18.79 23.37 1.00 3.53 1.99 2.56 2.58 7.84 3.56 21.11 25.45 20.04 2.27 2.38 4.97 8 IG8_SR5 SilentIntergenicRegion 0 4.05 17.31 9.48 16.38 16.79 9.76 10.90 9.54 13.58 16.14 0.34 5.45 0.68 3.74 6.30 3.86 5.82 36.02 23.10 26.43 6.40 2.09 8.84 9 IG8_AR9 ActiveIntergenicRegion 0 9.37 25.76 21.53 23.69 32.75 19.56 15.07 22.63 22.41 17.80 0.00 0.00 0.00 4.02 2.07 7.22 6.13 50.77 21.54 22.59 11.75 2.08 8.67 10 IG8_AR8 ActiveIntergenicRegion 0 4.35 25.55 20.63 27.16 23.50 23.45 18.98 16.63 22.28 25.75 1.32 5.29 0.55 3.57 5.41 7.22 9.36 41.00 34.43 32.84 6.34 3.23 8.30 11 IG8_AR7 ActiveIntergenicRegion 0 3.95 13.91 24.22 32.60 31.72 22.34 20.23 24.38 17.86 34.18 5.67 9.91 0.00 8.25 5.12 6.26 11.55 46.92 35.96 36.06 7.89 3.21 6.80 12 IG8_AR6 ActiveIntergenicRegion 0 3.81 8.95 27.45 30.80 36.93 23.66 15.23 18.84 13.83 46.56 6.57 7.79 0.00 11.04 8.70 5.94 8.25 67.81 26.76 33.19 12.78 0.00 12.63 13 IG8_SR4 SilentIntergenicRegion 0 5.22 13.60 16.12 19.82 29.49 25.72 20.59 18.98 16.63 25.86 1.38 2.99 2.16 6.26 5.90 3.21 5.85 39.10 23.31 32.25 5.35 2.02 7.64 14 IG8_AR5 ActiveIntergenicRegion 0 3.36 11.09 20.78 18.78 11.70 16.31 11.04 25.92 15.33 31.92 1.57 5.50 3.80 4.79 6.37 5.07 5.16 46.51 27.22 47.60 5.63 4.41 5.76 15 IG8_SR3 SilentIntergenicRegion 0 2.95 16.88 9.14 16.86 27.47 22.89 20.97 16.48 12.95 18.84 1.47 3.68 3.65 4.27 2.34 3.20 4.60 27.76 18.77 30.33 3.91 3.17 7.62 16 IG8_AR3 ActiveIntergenicRegion 0 4.91 15.98 13.17 23.79 37.22 33.77 22.00 14.92 19.91 21.35 1.49 4.23 4.58 5.64 2.59 3.83 5.10 24.25 15.59 30.42 4.26 1.06 3.40 17 IG8_SR2 SilentIntergenicRegion 0 1.84 10.50 6.04 11.55 16.65 14.57 8.84 8.19 8.83 15.42 1.57 1.37 0.36 2.85 2.76 2.15 1.36 17.34 14.91 17.38 2.11 0.98 2.32 18 IG8_AR2 ActiveIntergenicRegion 0 0.98 7.34 13.02 20.42 11.69 13.19 10.11 12.32 13.71 25.50 0.96 0.87 1.21 5.13 2.09 3.01 2.43 37.31 17.10 19.81 6.84 0.86 4.81 19 IG8_SR1 SilentIntergenicRegion 0 5.87 14.33 10.11 20.50 25.11 30.39 9.49 20.13 15.71 22.37 0.80 2.53 3.01 4.62 2.52 2.93 2.75 30.19 13.38 20.15 5.66 3.10 5.67 20 IG8_AR1 ActiveIntergenicRegion 0 6.92 17.02 0.67 1.48 24.35 21.35 9.13 3.75 2.68 3.74 1.41 5.47 0.00 4.94 4.48 2.17 2.40 7.72 11.60 20.12 3.98 2.28 5.35 21 ER1a ExonRegion 0 5.01 21.45 22.39 36.23 37.98 41.00 15.67 43.77 24.93 35.68 0.83 3.89 3.32 6.72 5.47 5.12 1.42 46.44 28.08 33.38 5.22 5.80 5.69 22 E1_Da NovelBoundary 0 0.00 21.44 16.65 17.58 20.80 34.36 4.33 26.04 5.99 16.12 0.00 0.00 0.00 2.47 0.00 0.00 0.00 26.86 4.33 13.68 2.66 0.00 8.54 23 E1a_E2a KnownJunction 0 0.00 0.00 7.10 34.86 0.00 0.00 0.00 51.06 20.75 28.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.36 0.00 0.00 0.00 0.00 0.00 24 E2_Aa NovelBoundary 0 3.04 14.87 5.88 5.93 86.93 30.72 5.87 5.75 8.54 13.73 0.00 0.00 0.00 4.94 0.00 0.00 0.00 5.97 14.87 15.92 5.25 2.69 8.71 25 ER2a ExonRegion 0 0.00 0.00 0.07 0.38 0.15 0.20 0.00 0.19 0.14 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.10 0.18 0.30 0.00 0.17 0.00 26 IG7 Intergenic 0 12.05 63.81 26.01 47.11 54.16 40.84 24.51 39.94 20.78 31.80 2.14 4.75 2.99 5.62 5.42 5.40 3.15 32.02 20.87 27.55 4.40 4.68 7.14 27 IG7_AR7 ActiveIntergenicRegion 0 0.00 10.00 4.70 5.57 8.92 18.95 3.97 14.40 6.79 6.31 0.00 0.00 0.00 3.38 3.63 2.72 0.00 11.70 8.49 10.64 2.20 0.00 0.00 28 IG7_AR6 ActiveIntergenicRegion 0 0.00 24.74 15.32 43.61 19.18 21.55 3.97 36.87 25.73 31.25 0.00 4.33 0.00 6.50 9.43 3.72 3.30 44.19 9.82 15.60 6.06 0.35 0.98 29 IG7_AR5 ActiveIntergenicRegion 0 3.63 33.99 15.93 44.98 39.95 35.76 10.69 39.75 27.17 32.11 0.00 4.95 0.00 4.41 11.40 5.94 3.30 47.25 15.02 24.16 5.82 5.21 13.42 30 IG7_AR4 ActiveIntergenicRegion 0 10.58 48.98 15.93 44.63 62.66 54.40 27.80 39.75 27.17 31.44 0.00 8.66 0.00 5.82 13.06 3.96 3.30 53.43 30.53 34.40 8.81 6.25 23.49 31 IG7_AR3 ActiveIntergenicRegion 0 10.58 41.35 15.93 43.61 54.11 51.35 27.80 34.57 23.88 28.93 0.00 8.18 0.00 4.87 18.70 2.97 0.73 50.09 28.67 34.04 7.35 6.25 23.49 32 IG7_AR2 ActiveIntergenicRegion 0 8.97 26.11 10.83 33.96 37.03 40.56 23.25 25.37 17.98 22.89 0.00 2.60 0.00 4.55 12.65 0.95 0.00 39.76 25.10 23.91 4.41 3.25 16.33 33 IG7_AR1 ActiveIntergenicRegion 0 18.03 95.70 38.66 68.99 80.59 59.82 35.92 59.24 29.84 46.21 3.35 6.19 4.67 7.95 7.43 6.86 4.61 44.29 28.05 39.21 5.93 7.02 9.18