Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF318 Gene 0 49.46 37.02 21.24 23.49 57.53 50.08 37.88 53.31 58.06 52.98 337.35 268.00 219.68 314.86 90.81 332.35 314.63 76.76 39.87 52.97 55.49 63.05 62.60 2 361428 Transcript 0 40.41 41.23 24.95 36.52 66.02 52.62 57.01 51.37 54.09 67.56 398.31 405.26 262.15 366.69 86.51 339.49 324.95 69.13 42.47 57.03 60.74 71.16 71.90 3 318149 Transcript 0 87.83 24.19 14.28 6.00 76.07 9.41 17.58 14.92 14.95 8.58 50.55 79.05 91.06 133.72 81.65 112.94 74.49 20.99 4.17 7.53 4.59 3.52 0.09 4 ER1a ExonRegion 1 3.25 1.01 0.55 0.49 1.80 2.71 3.26 2.32 6.70 5.61 75.72 10.21 6.06 73.40 14.95 60.47 93.48 13.36 5.32 10.02 16.60 4.68 10.93 5 E1a_E2a KnownJunction 1 16.74 5.79 4.76 3.16 11.04 5.11 8.04 11.75 30.12 29.15 104.29 54.02 18.67 130.38 54.27 84.51 243.57 39.75 16.28 22.88 48.99 28.47 11.87 6 ER2a ExonRegion 1 22.54 17.44 9.44 5.13 31.39 14.97 28.31 23.28 43.72 46.52 375.72 66.71 40.45 395.32 76.66 284.03 383.24 82.43 29.20 55.80 77.09 40.05 58.91 7 E2a_E3a KnownJunction 1 34.01 22.76 11.77 17.21 49.24 31.35 27.82 41.36 71.27 67.64 560.62 193.56 144.80 469.48 100.01 463.72 504.53 91.49 25.79 86.48 100.51 50.52 91.34 8 ER3a ExonRegion 0 50.38 32.53 24.45 16.60 54.94 48.83 37.61 63.12 83.21 68.03 564.47 383.66 197.74 576.46 119.68 542.65 533.46 123.64 60.47 89.00 89.49 88.74 105.99 9 E3a_E4a KnownJunction 0 87.94 39.99 27.76 33.60 64.52 53.78 55.60 57.67 94.62 56.89 602.26 316.00 254.69 537.53 133.51 686.14 506.87 182.69 68.52 89.87 82.41 130.06 129.15 10 ER4a ExonRegion 0 98.69 59.49 42.99 35.70 83.46 77.53 53.93 98.93 116.29 92.88 656.12 442.50 473.01 620.70 184.12 686.29 602.83 188.13 83.76 105.98 112.41 116.55 119.91 11 E4a_E5a KnownJunction 1 236.86 105.84 40.45 42.22 143.29 140.37 94.42 89.09 107.49 87.46 470.07 566.28 636.81 775.56 198.41 548.92 557.64 111.76 91.77 156.34 77.65 112.67 126.08 12 I4_AR1 ActiveIntronRegion 1 7.44 2.38 2.83 1.19 5.54 0.00 4.15 2.32 3.27 2.12 74.09 22.99 15.26 14.93 22.11 19.54 33.01 0.51 1.87 4.45 0.28 4.89 6.18 13 I4_AR2 ActiveIntronRegion 1 0.91 0.00 2.71 0.88 2.20 0.00 1.42 7.65 6.70 7.70 89.47 36.96 37.86 15.72 29.22 28.66 33.13 3.43 0.00 8.36 2.20 1.56 3.46 14 I4_AR3 ActiveIntronRegion 1 5.96 0.00 3.79 1.55 0.00 0.00 0.36 6.36 5.95 8.24 67.56 12.20 20.25 5.61 21.89 39.31 21.61 3.70 0.00 6.29 1.00 8.81 5.87 15 ER5a ExonRegion 1 159.25 85.27 40.76 28.43 134.67 102.31 78.31 86.72 89.43 79.64 424.06 487.80 545.26 601.12 158.47 438.00 483.28 98.93 60.78 88.57 82.04 83.34 89.22 16 E5a_E6a KnownJunction 1 133.80 92.02 46.36 25.17 153.82 96.93 101.13 95.66 106.02 79.62 391.94 511.97 556.94 532.88 149.70 432.37 372.60 104.01 24.47 81.81 77.16 60.68 88.27 17 ER6a ExonRegion 0 118.77 78.05 50.66 41.70 168.43 105.55 79.13 102.61 111.69 96.49 535.04 660.73 492.05 585.32 186.82 617.35 564.86 136.51 67.69 94.43 84.52 110.12 116.12 18 E6_Da NovelBoundary 0 0.00 3.35 0.00 4.73 27.93 0.00 8.08 28.05 9.78 7.68 7.21 0.00 15.26 0.00 8.90 22.39 21.60 3.90 4.61 5.69 0.00 0.00 8.28 19 E6a_E7a KnownJunction 0 251.38 70.38 63.36 54.77 249.92 141.51 101.80 104.08 118.89 101.78 598.41 676.72 654.02 626.23 151.55 730.32 623.09 152.26 77.65 126.56 80.99 135.08 197.10 20 E6a_E11a NovelJunction 0 6.89 2.96 0.00 0.00 0.00 0.00 0.00 1.97 3.36 0.00 5.26 0.00 0.00 15.60 4.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER7a ExonRegion 0 152.47 68.38 48.64 40.49 130.43 90.22 77.62 85.14 89.91 94.10 600.76 671.13 584.58 609.86 180.94 633.38 571.25 119.71 81.93 75.87 101.99 123.11 122.50 22 E7_Da NovelBoundary 0 63.27 36.51 47.54 42.09 114.35 104.20 31.18 61.20 65.88 44.21 254.54 176.01 270.60 210.49 46.85 360.08 258.81 74.24 85.56 57.72 43.74 110.10 128.22 23 E7a_E8a KnownJunction 0 6.59 12.10 23.89 11.65 22.75 19.93 42.26 27.44 22.60 52.00 324.66 265.74 138.46 324.09 70.96 244.64 253.67 51.90 34.07 37.33 48.93 60.68 55.40 24 E7a_E11a KnownJunction 1 101.43 19.54 12.39 6.46 81.75 8.18 14.09 19.18 16.46 8.76 55.59 90.93 94.15 138.80 81.09 126.12 78.35 26.78 0.00 7.99 6.30 2.63 0.00 25 I7 Intron 0 10.13 17.16 5.75 5.12 17.18 18.71 11.00 6.49 12.98 7.10 53.06 59.36 85.88 56.18 16.74 61.38 49.46 12.39 8.02 14.74 15.26 14.17 12.94 26 I7_AR1 ActiveIntronRegion 0 10.18 17.24 5.78 5.14 17.26 18.80 11.06 6.52 13.04 7.13 53.32 59.66 86.29 56.46 16.82 61.68 49.69 12.44 8.06 14.80 15.33 14.23 13.01 27 E8_Aa NovelBoundary 0 6.37 25.32 11.53 21.68 35.99 18.00 15.99 17.79 27.00 20.87 39.38 43.51 47.56 49.21 15.70 37.00 64.33 27.98 8.47 17.83 16.80 20.51 14.51 28 ER8a ExonRegion 0 32.93 32.33 17.27 24.07 63.47 54.10 41.02 48.29 53.96 66.05 449.61 459.14 286.56 370.90 73.05 332.25 382.34 81.17 45.23 59.43 73.27 67.80 72.01 29 E8_Da NovelBoundary 0 3.63 0.00 0.00 2.06 15.45 20.78 6.14 2.14 12.73 4.22 60.75 43.96 26.13 15.36 19.16 31.36 73.77 7.88 3.48 12.34 14.95 14.76 3.24 30 E8a_E9a KnownJunction 0 42.75 34.53 27.05 48.38 53.65 49.29 37.71 63.17 66.96 66.13 401.89 512.57 296.08 295.31 83.44 360.85 350.35 82.58 26.07 53.37 51.28 68.77 56.00 31 I8 Intron 0 12.76 8.09 5.09 6.24 19.17 7.61 10.54 9.08 8.79 7.68 48.13 64.32 53.52 31.39 20.77 45.12 47.29 6.27 8.51 12.70 6.89 9.36 8.85 32 I8_SR1 SilentIntronRegion 0 12.78 8.11 5.10 6.25 19.21 7.63 10.56 9.10 8.81 7.69 48.24 64.46 53.64 31.46 20.81 45.21 47.39 6.28 8.53 12.73 6.91 9.38 8.87 33 E9_Aa NovelBoundary 0 21.34 8.49 6.39 11.95 41.43 11.98 10.42 11.21 12.30 10.42 50.91 102.03 66.07 62.86 23.36 58.70 73.87 25.49 19.20 14.76 15.20 22.78 0.00 34 ER9a ExonRegion 0 48.04 46.05 28.49 54.14 71.84 60.30 66.34 67.54 72.58 75.42 475.64 498.54 363.65 451.31 124.78 410.83 365.57 82.47 53.21 63.04 73.24 70.05 97.48 35 E9a_E10a KnownJunction 0 85.35 93.01 40.60 60.03 141.68 91.20 124.19 63.75 72.83 108.52 541.87 525.32 366.70 600.51 115.33 507.47 420.85 82.99 74.17 98.75 87.35 116.83 114.73 36 E10_Aa NovelBoundary 0 22.89 2.89 3.58 1.43 12.65 0.00 2.25 9.65 2.92 1.67 2.53 27.16 21.91 0.00 0.00 8.72 8.51 2.24 0.00 5.31 0.00 0.00 0.00 37 ER10a ExonRegion 0 26.78 29.37 12.41 20.83 42.71 40.89 30.51 38.05 35.63 37.22 196.20 170.24 121.42 158.01 51.51 180.88 176.91 33.68 22.07 30.28 30.35 42.83 35.81 38 E10_Da NovelBoundary 1 10.67 11.58 9.14 12.92 32.09 2.33 16.87 26.57 23.96 17.35 18.27 124.24 106.49 32.08 0.00 34.95 28.05 6.18 8.85 3.20 0.00 2.57 11.95 39 I10_SR1 SilentIntronRegion 0 6.98 17.48 6.39 9.81 17.59 13.76 10.82 11.35 13.04 9.20 12.18 31.37 38.06 18.50 5.60 30.28 30.50 7.50 6.96 13.65 4.27 4.99 4.69 40 I10_AR1 ActiveIntronRegion 0 8.65 18.87 6.69 8.40 15.99 13.54 11.08 10.65 12.26 11.73 9.95 31.35 42.48 15.70 7.54 21.63 21.92 3.26 3.73 12.05 2.38 5.64 3.89 41 I10_SR2 SilentIntronRegion 1 6.21 18.51 12.90 17.10 32.04 12.00 5.86 16.52 13.78 10.83 8.14 45.18 66.10 9.75 15.01 11.28 8.98 2.03 1.92 9.17 0.33 9.81 1.33 42 I10_AR2 ActiveIntronRegion 0 10.70 4.99 4.17 7.43 15.38 7.39 5.89 6.99 5.74 3.29 13.69 23.15 28.82 12.36 9.91 29.18 26.76 4.13 2.85 4.74 0.76 2.26 1.01 43 I10_SR3 SilentIntronRegion 0 13.02 2.85 5.65 6.03 15.26 10.13 7.97 5.20 5.05 5.61 12.35 21.12 46.25 8.93 14.49 12.53 21.02 2.91 2.43 3.88 2.01 1.64 1.25 44 I10_AR4 ActiveIntronRegion 0 13.72 3.78 6.29 4.64 15.00 6.56 5.94 6.42 8.27 7.70 15.51 25.54 52.31 9.92 24.02 35.68 31.66 4.73 1.43 4.45 2.43 0.80 5.24 45 E11_Aa NovelBoundary 0 28.52 10.98 7.51 8.72 40.49 2.67 8.30 7.19 7.96 5.37 12.32 5.70 19.97 9.89 10.75 52.81 34.13 2.28 19.20 8.69 5.62 0.00 0.00 46 ER11a ExonRegion 1 74.24 28.84 16.18 5.54 70.39 10.65 21.08 10.66 13.43 8.40 45.50 67.16 87.97 128.64 82.20 99.76 70.63 15.21 8.33 7.06 2.88 4.41 0.19 47 IG39 Intergenic 0 62.22 20.19 15.27 11.78 54.38 11.68 14.98 17.33 17.75 8.27 22.08 32.22 55.67 43.85 50.08 79.23 42.29 12.56 9.18 9.47 4.08 2.00 2.72 48 IG39_AR1 ActiveIntergenicRegion 0 75.93 18.95 20.84 8.08 46.86 9.51 17.22 15.34 19.26 10.30 32.16 39.44 46.23 60.08 60.34 81.74 52.79 12.13 13.24 11.27 2.10 3.73 1.88 49 IG39_SR1 SilentIntergenicRegion 0 58.91 20.54 13.91 12.72 56.34 12.24 14.45 17.85 17.41 7.78 19.61 30.49 58.11 39.89 47.61 78.74 39.75 12.68 8.19 9.03 4.58 1.57 2.93