Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BEND6 Gene 0 2.77 23.63 9.75 20.04 2.78 83.32 0.50 2.67 21.95 5.44 2.79 5.62 19.20 4.73 5.17 2.58 7.81 3.58 3.41 4.13 27.21 42.46 18.43 2 370748 Transcript 0 0.00 1.15 7.14 2.43 0.00 3.67 0.00 0.00 2.74 0.30 0.00 1.13 7.14 3.74 0.13 2.97 1.87 0.00 1.94 4.35 11.69 8.79 4.85 3 322055 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 370750 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 495359 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 370746 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 370745 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 484701 Transcript 0 0.50 0.72 0.87 4.27 0.00 5.75 0.00 0.31 0.87 0.61 0.00 0.00 0.46 0.16 0.00 0.71 1.83 0.00 0.38 0.00 0.26 0.25 0.35 9 IG45 Intergenic 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.58 0.42 0.00 3.50 0.00 1.75 4.74 3.98 4.04 9.73 1.25 0.00 0.48 12.99 0.47 6.66 10 IG45_SR1 SilentIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.62 0.44 0.00 3.72 0.00 1.86 4.73 4.06 4.29 10.01 1.32 0.00 0.51 13.72 0.50 7.06 11 ER1a ExonRegion 0 0.15 0.27 0.28 0.00 0.00 3.40 0.00 0.00 1.08 0.66 0.38 0.00 1.24 1.33 0.82 1.43 1.31 1.10 0.00 0.34 12.82 2.20 4.24 12 E1_Ab KnownBoundary 0 3.78 6.64 3.16 1.86 0.00 5.00 0.00 0.00 8.59 2.77 5.00 0.00 0.00 14.24 4.45 0.00 14.31 9.20 0.00 0.00 32.19 8.94 0.00 13 ER1b ExonRegion 0 0.77 10.63 2.47 1.72 0.00 14.28 0.12 0.43 6.56 4.03 4.42 0.00 0.59 10.09 7.00 0.00 13.99 4.60 0.00 0.08 32.23 15.57 7.30 14 E1_Ac KnownBoundary 0 0.00 12.83 1.63 8.56 0.00 28.17 0.00 2.05 8.10 6.85 4.32 0.00 0.00 22.54 6.30 0.00 0.00 5.14 0.00 0.00 25.39 26.39 8.19 15 ER1c ExonRegion 0 0.00 9.29 10.30 5.70 0.21 19.28 0.66 1.10 9.52 4.12 1.52 0.34 3.94 9.65 3.56 0.88 4.13 5.29 1.85 3.48 26.95 16.36 18.55 16 E1_Da NovelBoundary 0 3.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.94 0.00 3.93 13.46 1.66 0.00 0.00 0.00 0.00 0.00 17 E1a_E2a KnownJunction 0 0.00 10.00 9.02 7.99 3.23 37.42 0.00 0.00 12.18 6.77 7.58 0.00 0.00 2.12 0.00 4.27 8.88 6.09 0.00 2.36 44.05 28.47 13.06 18 ER2a ExonRegion 0 1.96 17.91 22.07 18.18 3.24 81.33 0.65 3.27 21.73 7.95 7.94 11.37 28.42 9.10 7.58 4.34 7.11 5.25 7.40 7.08 40.01 59.89 32.97 19 E2a_E3a KnownJunction 0 0.00 15.39 16.82 21.44 4.16 93.53 0.00 2.55 11.08 4.35 7.58 0.00 35.06 23.90 15.20 3.67 31.42 0.00 0.00 6.07 65.79 65.76 41.57 20 ER3a ExonRegion 0 1.82 40.42 23.03 25.58 5.10 117.45 2.23 3.25 31.57 8.35 5.53 13.94 47.64 12.01 3.42 5.39 22.49 5.70 4.29 6.45 73.89 64.10 37.20 21 E3a_E6a KnownJunction 0 0.00 11.18 0.00 3.76 0.00 5.79 0.00 0.00 5.09 0.00 0.00 0.00 6.17 0.00 4.45 0.00 4.39 0.00 0.00 0.00 7.78 5.39 0.00 22 E3a_E7a KnownJunction 0 0.00 21.64 4.58 3.50 0.00 66.33 0.00 1.64 12.12 9.46 1.95 0.00 6.82 2.88 6.30 4.36 0.00 1.78 0.00 2.81 56.59 28.72 11.95 23 ER4a ExonRegion 0 0.00 1.15 7.14 2.43 0.00 3.67 0.00 0.00 2.74 0.30 0.00 1.13 7.14 3.74 0.13 2.97 1.87 0.00 1.94 4.35 11.69 8.79 4.85 24 I4_AR1 ActiveIntronRegion 0 1.95 10.20 9.94 16.41 1.04 29.16 0.11 1.31 16.20 1.95 1.53 11.80 18.51 7.69 3.19 3.90 5.64 4.46 3.02 4.24 16.59 8.76 11.46 25 ER5a ExonRegion 0 1.00 1.45 1.73 6.85 0.00 9.18 0.00 0.61 1.75 1.22 0.00 0.00 0.92 0.32 0.00 1.41 0.11 0.00 0.76 0.00 0.52 0.49 0.70 26 E5a_E6a KnownJunction 0 0.00 0.00 0.00 1.70 0.00 2.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.55 0.00 0.00 0.00 0.00 0.00 0.00 27 ER6a ExonRegion 0 0.00 10.14 3.24 3.36 0.00 39.08 0.00 0.00 11.58 2.80 1.54 0.00 13.70 0.10 1.31 0.00 3.97 0.92 1.39 0.00 8.54 20.48 3.49 28 E6a_E7a KnownJunction 0 0.00 12.50 4.38 1.40 0.00 23.79 0.00 0.00 19.53 4.35 0.00 0.00 32.14 0.00 0.00 0.00 4.49 2.57 4.80 0.00 14.58 28.35 4.35 29 ER7a ExonRegion 0 1.97 23.39 5.56 5.55 0.00 100.20 0.00 0.56 28.80 10.28 0.83 0.00 34.00 6.79 4.25 2.23 14.50 4.69 3.75 5.62 56.27 39.44 15.94 30 ER7b ExonRegion 0 1.39 19.03 3.43 13.97 2.12 112.78 1.05 1.54 28.43 5.60 6.67 3.77 24.98 6.55 4.60 2.96 18.03 5.40 3.63 5.45 52.22 37.14 28.76 31 E7b_E8a KnownJunction 0 3.48 29.21 1.45 7.16 0.00 114.14 0.00 4.52 20.28 4.97 5.26 0.00 0.00 0.00 0.00 3.16 12.06 8.42 4.80 8.95 42.19 42.74 23.73 32 E7b_E10a NovelJunction 0 0.00 6.25 0.00 2.00 0.00 4.94 0.00 0.00 0.00 2.69 2.00 0.00 0.00 0.00 0.00 0.00 0.00 4.19 0.00 6.14 8.15 8.57 10.93 33 E8a_E8b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 E8b_E8c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER8a ExonRegion 0 0.00 30.98 2.67 11.87 0.00 121.03 0.00 3.46 20.49 4.92 4.66 0.00 12.41 5.06 3.24 2.10 10.10 8.04 3.19 5.63 47.70 42.41 16.58 36 ER8b ExonRegion 0 0.00 36.60 3.68 16.35 0.00 121.03 0.00 1.73 21.00 4.59 5.80 0.00 14.07 4.87 5.80 0.00 9.90 7.39 3.19 6.38 48.48 50.00 17.62 37 ER8c ExonRegion 0 2.98 54.02 4.77 26.04 0.00 110.54 1.31 2.63 23.48 4.79 3.77 10.17 16.53 5.12 7.69 2.94 10.64 5.15 3.99 2.62 42.04 40.90 19.90 38 E8_Ab KnownBoundary 0 0.00 23.68 4.35 13.35 0.00 23.28 0.00 1.93 6.89 4.14 0.00 0.00 0.00 0.00 0.00 0.00 8.04 1.82 4.05 0.00 16.74 18.49 11.44 39 E8_Ac KnownBoundary 0 0.00 9.60 0.00 5.69 0.00 48.55 0.00 0.00 9.72 0.00 0.00 7.35 13.64 0.00 0.00 0.00 4.68 2.20 0.00 3.00 2.66 5.14 0.00 40 ER8d ExonRegion 0 2.12 63.04 4.90 24.53 0.00 75.19 0.00 3.46 25.94 5.73 1.93 21.65 23.45 1.62 8.70 0.00 9.90 7.39 6.37 2.13 30.85 29.17 14.68 41 ER8e ExonRegion 0 5.62 46.45 3.91 20.36 0.00 84.18 0.00 4.21 22.58 5.38 1.87 11.64 24.62 2.49 8.52 2.60 5.26 6.12 2.89 4.06 28.99 27.09 11.47 42 E8_Dc KnownBoundary 0 11.34 39.20 3.22 14.32 0.00 104.54 0.00 5.09 15.10 4.22 2.68 11.85 20.45 4.94 4.45 7.69 0.00 2.57 0.00 3.26 28.91 36.62 11.69 43 ER8f ExonRegion 0 5.64 29.41 2.67 20.34 2.13 115.29 2.44 5.50 29.07 4.88 5.50 1.33 38.96 3.21 2.68 10.36 1.18 6.21 1.31 2.35 24.07 49.20 22.14 44 E8d_E9a KnownJunction 0 3.78 31.38 2.90 24.31 4.33 106.98 4.06 4.11 35.56 7.09 6.95 0.00 59.74 2.47 9.52 8.72 4.21 4.64 4.42 5.18 17.17 54.87 29.11 45 E8d_E10a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.57 0.00 46 ER9a ExonRegion 0 6.64 36.72 8.12 28.81 9.50 127.50 1.74 3.32 25.60 4.48 2.35 1.19 42.49 4.30 5.06 3.96 7.77 5.58 2.19 6.01 13.27 48.17 31.15 47 E9_Da KnownBoundary 0 8.89 58.74 12.57 38.52 12.65 148.27 4.24 2.01 20.40 3.71 0.00 6.30 63.15 2.47 8.90 4.36 7.48 4.68 0.00 6.33 9.08 49.78 25.52 48 ER9b ExonRegion 0 7.90 54.13 10.10 31.36 4.51 108.88 2.57 4.04 29.01 3.91 1.15 13.74 31.79 6.10 6.41 2.87 4.61 2.77 3.15 4.06 18.53 56.26 26.29 49 E9b_E10a KnownJunction 0 0.00 62.75 9.70 36.39 0.00 115.96 0.00 4.23 36.89 1.67 0.00 6.30 32.47 7.12 0.00 3.85 7.76 6.51 4.52 3.26 21.81 86.28 32.10 50 E10_Aa NovelBoundary 0 0.00 18.42 1.21 6.79 0.00 2.61 0.00 0.00 5.30 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 51 ER10a ExonRegion 0 4.12 29.61 12.29 29.98 4.23 112.19 0.11 3.92 29.99 7.02 2.11 6.63 20.56 3.80 7.10 2.39 7.49 3.58 4.43 5.31 22.76 59.06 18.98 52 ER10b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 IG46_AR1 ActiveIntergenicRegion 0 2.04 1.30 0.00 2.40 1.72 6.22 0.00 0.00 2.50 0.00 0.00 0.00 0.62 0.00 0.66 0.00 0.53 0.00 0.00 0.34 0.35 9.45 0.94