Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HMGCLL1 Gene 0 5.00 29.06 18.95 11.60 1.29 73.46 12.41 18.92 26.36 17.77 0.00 0.39 0.00 0.00 0.00 0.00 0.00 0.71 2.38 36.19 0.46 1.19 0.55 2 358072 Transcript 0 0.00 0.00 5.31 9.99 0.00 0.00 0.00 10.80 10.66 7.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.18 0.00 0.00 0.00 0.00 0.00 3 308161 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 398661 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 274901 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 370852 Transcript 0 0.00 0.00 0.53 0.59 0.00 0.13 0.00 0.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.10 0.00 0.00 0.00 7 370850 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 428842 Transcript 0 0.58 3.98 2.38 1.33 0.32 6.74 2.15 1.62 4.01 2.80 0.00 0.12 0.00 0.00 0.00 0.00 0.00 0.51 0.44 4.85 0.04 0.45 0.14 9 ER1a ExonRegion 0 1.86 5.14 0.50 0.00 0.00 55.36 3.63 1.36 0.96 0.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.21 0.00 3.59 0.00 0.00 1.29 10 E1_Ab KnownBoundary 0 0.00 3.09 1.80 0.00 0.00 33.73 0.00 1.81 2.86 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.62 0.00 0.00 0.00 11 E1_Ac KnownBoundary 0 0.00 0.00 0.00 1.53 0.00 11.30 2.08 2.55 0.00 1.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.20 0.00 0.00 0.00 12 E1_Ad KnownBoundary 0 0.00 5.66 6.89 3.00 0.00 77.40 15.99 0.00 1.13 1.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 0.00 20.90 0.00 0.00 4.01 13 ER1b ExonRegion 0 0.00 6.10 1.23 0.00 0.00 54.28 1.32 3.46 2.47 2.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.91 0.00 0.00 0.00 14 ER1c ExonRegion 0 0.30 6.49 3.38 1.95 0.00 66.98 9.14 2.30 3.29 2.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.99 0.00 0.00 2.38 15 ER1d ExonRegion 0 0.83 20.14 8.21 2.28 1.12 40.90 7.18 6.30 8.15 6.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.41 1.36 25.72 0.92 0.00 0.82 16 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.38 0.00 0.00 1.79 2.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E1b_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E1b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E1b_E4b KnownJunction 0 0.00 0.00 2.45 1.27 0.00 12.38 1.85 4.44 8.10 9.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.48 0.00 7.67 0.00 0.00 0.00 20 ER1e ExonRegion 0 0.00 0.00 2.45 1.36 0.00 12.84 1.32 5.76 9.88 9.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.70 0.00 15.60 0.00 0.00 0.00 21 ER2a ExonRegion 0 0.00 1.04 0.00 0.00 0.00 0.00 0.00 1.46 3.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.23 0.00 0.00 0.00 22 E2a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER3a ExonRegion 0 0.00 0.00 0.20 0.03 0.00 0.39 0.00 2.56 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.30 0.00 0.00 0.00 24 E3a_E4b KnownJunction 0 0.00 0.00 1.39 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER4a ExonRegion 0 0.00 3.56 0.92 0.68 0.67 11.00 0.33 1.73 4.32 3.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.92 0.00 3.19 0.00 0.00 0.00 26 ER4b ExonRegion 0 1.06 18.91 20.77 9.91 1.67 49.19 4.72 12.75 32.56 16.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.72 0.52 57.55 1.63 1.33 1.87 27 E4a_E5a KnownJunction 0 7.48 39.73 36.22 16.45 0.00 125.72 10.07 28.18 60.10 20.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 3.95 97.92 5.75 0.00 4.35 28 ER5a ExonRegion 0 2.72 42.44 25.62 14.52 1.26 125.19 20.18 23.93 51.11 31.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.40 4.34 86.88 2.35 1.66 0.87 29 E5a_E6a KnownJunction 0 3.78 52.95 21.79 20.44 0.00 127.94 33.83 14.25 37.88 29.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.98 3.58 115.82 0.00 3.12 0.00 30 E5a_E7a KnownJunction 0 0.00 2.96 0.00 0.00 0.00 13.23 2.25 2.14 2.34 2.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 5.63 4.27 31 E5a_E11a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 23.23 0.00 1.60 4.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER6a ExonRegion 0 6.79 50.56 36.21 23.06 5.10 86.19 15.75 27.75 45.71 31.65 0.00 3.79 0.00 0.00 0.00 0.00 0.00 4.02 3.12 97.45 2.53 0.56 0.00 33 E6a_E7a KnownJunction 0 3.78 72.95 67.15 26.50 4.24 119.14 19.92 35.08 72.16 51.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.53 9.60 128.79 2.41 0.00 0.00 34 ER7a ExonRegion 0 7.07 55.55 39.96 20.11 1.29 130.90 24.13 32.35 60.35 44.31 0.00 0.99 0.00 0.00 0.00 0.00 0.00 3.53 7.18 111.01 2.28 1.37 3.00 35 E7_Da KnownBoundary 0 0.00 3.35 14.19 0.00 0.00 0.00 2.16 1.93 12.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.02 0.00 0.00 4.35 36 E7a_E8a KnownJunction 0 3.04 45.58 31.73 26.20 0.00 129.36 32.68 22.26 45.95 39.73 0.00 5.85 0.00 0.00 0.00 0.00 0.00 0.00 4.80 79.00 3.15 0.00 0.00 37 ER7b ExonRegion 0 1.75 8.38 6.22 3.31 0.28 6.83 6.11 3.15 5.92 2.25 0.00 0.37 0.00 0.00 0.00 0.00 0.00 0.62 1.32 11.35 0.11 1.35 0.41 38 ER8a ExonRegion 0 4.66 35.24 30.23 18.74 2.59 135.10 27.27 27.14 40.28 34.35 0.00 0.54 0.00 0.00 0.00 0.00 0.00 0.00 11.05 86.27 0.72 1.46 0.00 39 E8a_E9a KnownJunction 0 10.00 57.03 30.57 18.78 8.66 124.98 19.17 35.61 42.56 31.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.15 89.55 0.00 0.00 0.00 40 ER9a ExonRegion 0 9.63 55.31 24.32 20.90 1.66 154.75 19.35 38.19 48.53 44.06 0.00 0.68 0.00 0.00 0.00 0.00 0.00 0.97 8.17 78.81 1.09 0.00 2.50 41 E9_Da KnownBoundary 0 0.00 37.56 21.61 11.32 0.00 104.66 16.16 16.55 19.21 28.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.58 42.50 0.00 0.00 7.68 42 E9a_E9b KnownJunction 0 0.00 0.00 10.61 19.98 0.00 0.00 0.00 21.60 21.33 15.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.36 0.00 0.00 0.00 0.00 0.00 43 E9_Ab KnownBoundary 0 6.82 64.46 5.94 9.96 0.00 149.80 21.24 9.57 12.93 16.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59.89 0.00 0.00 3.41 44 ER9b ExonRegion 0 7.76 74.56 25.53 25.67 0.00 212.11 24.93 24.20 40.55 42.82 0.00 4.33 0.00 0.00 0.00 0.00 0.00 1.85 9.56 74.82 2.20 0.00 5.87 45 ER9c ExonRegion 0 7.76 62.65 15.42 24.99 0.00 171.15 18.20 20.93 35.20 33.83 0.00 1.56 0.00 0.00 0.00 0.00 0.00 0.98 8.85 62.82 1.71 0.00 1.31 46 E9_Db NovelBoundary 0 0.00 0.00 6.71 3.40 0.00 11.53 5.92 9.82 1.79 1.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 26.65 0.00 0.00 0.00 47 E9b_E11a KnownJunction 0 7.26 51.50 18.57 19.71 0.00 123.39 13.82 15.12 32.81 30.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.47 45.32 0.00 0.00 0.00 48 I9 Intron 0 2.25 13.74 2.77 2.62 1.22 15.31 4.42 9.00 5.03 4.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.49 0.00 26.32 0.00 0.00 0.67 49 I9_SR1 SilentIntronRegion 0 2.26 13.78 2.78 2.63 1.22 15.35 4.43 9.03 5.05 4.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.49 0.00 26.40 0.00 0.00 0.67 50 ER10a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 I10_AR16 ActiveIntronRegion 0 2.06 2.73 0.00 1.63 0.00 20.13 3.23 3.12 15.15 1.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 0.00 0.00 0.00 52 E11_Aa NovelBoundary 0 0.00 8.49 1.27 0.00 0.00 36.46 0.00 6.90 6.89 5.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.19 0.00 0.00 0.00 53 ER11a ExonRegion 0 5.36 46.18 30.95 16.64 0.00 143.24 18.74 23.73 40.73 35.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.22 7.51 50.96 2.59 0.00 1.19 54 E11a_E12a KnownJunction 0 3.78 39.53 25.96 23.91 0.00 151.39 14.93 17.46 51.30 30.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 4.80 62.96 0.00 0.00 0.00 55 ER12a ExonRegion 0 10.54 55.44 36.45 23.07 2.85 152.96 20.67 41.74 51.39 34.70 0.00 0.26 0.00 0.00 0.00 0.00 0.00 0.12 2.29 53.73 0.16 1.61 0.11 56 ER12b ExonRegion 0 0.00 0.00 0.98 0.00 0.00 5.50 0.00 1.73 2.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.85 0.00 0.00 0.00