Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FRS3 Gene 0 13.07 23.44 46.95 37.69 26.36 64.33 14.08 55.62 53.05 48.92 11.62 5.07 5.96 14.75 12.33 13.68 12.31 53.53 25.86 35.58 17.30 10.07 13.31 2 422888 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 426290 Transcript 0 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.02 0.00 0.00 0.01 0.00 4 373018 Transcript 0 10.49 11.83 10.20 4.97 6.42 38.97 10.94 2.32 9.09 11.98 1.16 0.00 0.00 3.18 5.12 1.78 0.00 15.94 11.50 6.82 7.74 2.50 25.10 5 259748 Transcript 0 0.71 1.69 2.45 0.00 0.00 2.14 0.88 0.29 2.26 1.34 0.00 0.00 0.00 1.08 0.48 0.00 0.00 2.46 1.06 0.71 0.73 0.00 2.94 6 466420 Transcript 0 3.35 4.58 1.92 3.06 3.71 4.75 4.57 2.62 3.22 1.35 2.14 5.60 6.14 4.07 4.86 4.68 3.27 4.56 6.07 5.79 2.32 1.66 5.13 7 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1_Da NovelBoundary 0 3.78 3.16 4.20 5.33 0.00 15.33 2.25 5.09 1.65 3.04 2.68 0.00 0.00 4.94 0.00 0.00 13.65 2.11 0.00 0.00 19.58 0.00 0.00 9 E1a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 Ix Intron 0 10.22 4.71 13.75 9.02 7.24 7.79 4.35 8.46 6.76 9.24 4.11 1.77 0.75 9.26 9.66 9.19 3.83 5.15 6.77 5.34 5.11 1.61 0.00 11 Ix_SR1 SilentIntronRegion 0 10.29 4.75 13.84 9.09 7.28 7.85 4.38 8.51 6.81 9.32 4.14 1.78 0.75 9.34 9.73 9.26 3.86 5.19 6.82 5.38 5.15 1.62 0.00 12 Ix Intron 0 5.84 2.31 7.71 10.22 15.65 4.47 3.23 4.60 6.87 15.55 3.77 5.75 0.00 3.46 8.20 4.83 2.14 5.22 10.86 6.91 2.51 1.69 0.48 13 Ix_AR2 ActiveIntronRegion 0 7.19 2.85 9.50 12.59 19.23 5.50 3.97 5.67 8.46 19.14 4.25 7.08 0.00 4.26 10.10 5.93 2.64 6.43 13.38 8.09 2.64 2.08 0.59 14 Ix Intron 0 1.81 0.87 4.70 1.74 1.15 9.43 1.13 2.21 0.79 4.39 4.14 0.00 0.00 0.70 0.88 0.00 2.83 0.00 2.73 2.74 15.11 2.68 2.52 15 Ix_AR1 ActiveIntronRegion 0 1.85 0.89 4.78 1.77 1.17 9.58 1.14 2.25 0.80 4.47 4.21 0.00 0.00 0.71 0.89 0.00 2.88 0.00 2.78 2.78 15.37 2.71 2.56 16 E2_Aa NovelBoundary 0 0.00 0.00 39.97 22.11 7.30 83.93 7.11 20.04 27.75 30.46 9.58 0.00 0.00 0.00 4.94 8.72 13.28 2.57 16.57 2.49 62.77 8.27 9.82 17 ER2a ExonRegion 0 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.04 0.00 0.00 0.03 0.00 18 E2_Da NovelBoundary 0 3.78 6.38 46.63 14.62 0.00 11.47 0.00 14.05 20.78 23.69 5.05 0.00 0.00 2.41 5.19 0.00 12.16 2.20 22.59 8.76 23.04 13.84 7.34 19 E2a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER3a ExonRegion 0 14.17 14.98 6.47 4.87 12.84 62.72 14.02 0.04 7.05 11.04 2.32 0.00 0.00 4.07 5.05 3.57 0.00 13.76 18.85 8.46 9.80 5.00 17.93 21 E3a_E4b KnownJunction 0 6.82 8.68 13.93 5.06 0.00 15.22 7.86 4.60 11.14 12.92 0.00 0.00 0.00 2.30 5.19 0.00 0.00 18.12 4.14 5.18 5.68 0.00 32.27 22 ER4a ExonRegion 0 0.71 1.69 2.45 0.00 0.00 2.14 0.88 0.29 2.26 1.34 0.00 0.00 0.00 1.08 0.48 0.00 0.00 2.46 1.06 0.71 0.73 0.00 2.94 23 ER4b ExonRegion 0 8.87 11.15 35.61 15.78 9.73 15.36 5.90 35.21 41.67 38.07 12.44 2.06 0.00 11.54 7.39 4.97 8.31 36.01 24.70 25.52 17.80 5.36 16.06 24 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E4a_E6a KnownJunction 0 14.22 0.00 49.38 39.02 21.31 27.26 3.49 72.82 83.65 60.47 5.21 7.65 0.00 7.12 14.09 15.64 17.95 81.83 46.87 48.07 11.49 16.66 36.54 26 ER5a ExonRegion 0 0.95 0.02 0.00 0.60 1.20 0.80 2.36 1.54 0.55 0.01 0.58 0.53 0.00 0.81 0.61 0.44 1.47 1.09 0.47 0.95 0.00 0.00 0.44 27 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER6a ExonRegion 0 12.65 24.95 58.51 23.14 38.66 98.70 15.22 64.46 63.75 63.52 15.07 4.18 0.32 16.61 7.43 14.56 11.46 111.01 45.81 42.51 21.27 12.08 30.32 29 E6a_E7a KnownJunction 0 0.00 0.00 0.00 4.99 4.33 8.35 0.00 0.00 3.24 1.45 2.00 6.30 0.00 4.41 0.00 0.00 0.00 6.92 7.53 2.56 3.03 0.00 4.18 30 E6a_E8a KnownJunction 0 10.22 26.84 74.21 29.37 93.89 180.86 28.04 82.56 48.81 57.91 12.06 0.00 0.00 6.83 9.64 0.00 8.04 59.36 36.14 57.72 31.26 17.64 12.21 31 ER7a ExonRegion 0 15.80 22.88 9.60 9.69 13.00 14.59 20.50 11.57 12.30 5.28 8.11 21.18 30.69 15.11 23.68 22.95 14.85 14.80 22.36 25.46 8.59 8.28 21.05 32 E7_Da NovelBoundary 0 2322.56 2044.90 4993.94 5720.38 1984.55 1372.05 2511.97 5872.77 5125.73 5264.86 1234.73 510.47 572.85 525.17 918.60 1892.75 2374.00 5639.86 1566.16 2251.61 2227.82 2219.10 2471.18 33 ER8a ExonRegion 0 14.77 19.72 74.09 32.96 83.88 168.07 33.53 89.24 69.31 59.11 17.04 4.83 4.69 16.88 5.33 23.50 13.13 65.66 37.93 50.87 27.47 15.70 17.41 34 E8_Da KnownBoundary 0 34.23 42.23 94.26 51.84 88.12 178.87 50.92 99.32 95.40 69.25 22.11 6.30 0.00 19.54 5.56 42.81 15.71 88.21 47.62 65.64 9.08 13.90 7.60 35 ER8b ExonRegion 0 15.45 46.17 83.55 60.95 28.08 87.00 20.47 97.42 93.00 85.59 18.98 4.87 4.40 18.90 11.63 28.48 23.38 84.11 38.58 56.10 28.66 15.68 18.64 36 E8b_E9a KnownJunction 0 17.56 57.75 91.30 44.38 50.59 127.20 22.52 128.93 109.34 110.05 25.01 0.00 0.00 23.37 19.90 29.74 12.81 103.47 75.48 91.15 36.45 33.62 35.17 37 ER9a ExonRegion 0 54.48 39.67 102.15 98.22 46.11 121.63 24.34 130.05 121.40 114.88 19.68 8.51 3.48 23.62 16.66 24.78 24.93 108.35 63.65 68.71 27.09 14.82 27.34 38 E9_Da KnownBoundary 0 123.80 104.72 127.49 116.07 59.42 184.72 45.71 198.31 145.77 133.05 18.11 55.22 0.00 28.67 24.72 40.84 17.39 197.32 70.50 99.01 41.45 23.57 39.10 39 ER9b ExonRegion 0 38.79 56.63 89.45 75.70 42.11 151.73 30.57 120.13 118.28 99.43 19.67 23.25 2.45 28.00 15.14 24.62 22.39 105.40 55.40 75.30 37.89 18.39 20.94 40 E9b_E10a KnownJunction 0 9.71 52.10 88.14 65.93 33.79 152.87 31.49 72.70 117.68 82.82 24.27 6.15 6.49 21.13 9.27 15.38 22.72 94.35 58.07 51.33 27.68 20.88 7.60 41 E10_Aa NovelBoundary 0 3.78 0.00 6.33 1.50 8.06 0.00 3.62 0.00 6.28 0.00 0.00 0.00 0.00 10.30 0.00 8.72 0.00 11.44 0.00 2.56 2.47 0.00 0.00 42 ER10a ExonRegion 0 17.16 36.19 89.86 64.44 40.98 137.34 24.73 83.31 85.86 62.56 17.60 3.78 7.43 23.41 14.21 20.86 18.96 113.06 49.43 57.28 27.92 9.66 20.02 43 E10_Da NovelBoundary 0 14.37 0.00 10.53 3.23 0.00 2.67 3.75 2.55 0.00 1.64 2.26 0.00 0.00 4.94 6.30 0.00 0.00 3.61 4.80 0.00 0.00 0.00 0.00 44 E10a_E11a KnownJunction 0 44.53 66.11 119.19 93.89 87.01 219.19 31.75 124.54 98.70 65.92 21.01 6.30 13.47 30.43 24.11 31.62 34.97 166.60 87.91 79.07 21.99 17.45 34.49 45 E11_Aa NovelBoundary 0 17.56 2.96 5.71 6.06 4.33 7.33 4.11 5.34 1.79 6.63 0.00 5.40 0.00 0.00 8.90 8.63 0.00 15.42 4.33 0.00 0.00 3.12 4.10 46 ER11a ExonRegion 0 12.28 27.34 56.55 48.70 33.35 75.84 14.40 69.51 64.76 62.30 13.82 4.26 6.11 17.93 15.77 14.53 13.82 61.98 26.13 42.54 20.66 13.18 12.16