Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MED20 Gene 0 6.27 6.34 7.64 4.66 9.00 15.95 9.85 8.83 10.28 18.29 22.21 9.13 9.04 26.00 18.84 31.25 24.98 17.69 15.66 11.45 21.15 12.73 13.53 2 482361 Transcript 0 4.64 2.52 1.34 1.14 4.91 17.25 10.05 0.66 1.26 3.53 3.68 0.00 0.00 9.01 4.42 6.37 9.20 2.99 5.84 5.02 8.03 2.53 2.94 3 409312 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.64 1.67 4.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 4 434077 Transcript 0 0.29 0.57 0.25 0.28 1.12 0.49 0.37 1.42 1.42 0.26 0.28 1.49 0.54 0.92 0.35 0.41 0.92 0.00 0.00 0.30 0.00 0.00 0.00 5 265350 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 4.33 0.00 3.25 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 6 409060 Transcript 0 4.23 3.69 0.82 0.98 3.91 5.39 7.18 7.39 6.44 4.43 6.10 2.87 6.17 7.67 9.92 13.07 9.14 3.44 5.05 4.92 6.74 5.03 5.43 7 467535 Transcript 0 0.55 0.72 0.48 0.18 0.23 0.45 0.44 1.33 0.46 0.84 0.19 0.96 3.11 2.35 2.76 0.27 1.02 1.05 0.49 1.70 0.00 0.15 0.73 8 394251 Transcript 0 0.00 0.00 0.92 0.51 4.05 0.00 0.00 0.65 0.46 0.00 0.00 2.70 0.00 0.00 0.00 0.75 0.83 0.00 0.00 1.07 0.00 0.53 0.00 9 423815 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.30 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1a ExonRegion 0 9.27 5.04 2.68 2.27 9.81 34.49 17.84 1.32 1.35 5.73 7.36 0.00 0.00 18.02 8.84 12.74 18.39 5.98 11.68 10.03 16.06 5.06 5.87 11 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.46 4.77 0.00 0.00 0.00 0.00 0.00 0.00 12 E1_Ad KnownBoundary 0 0.00 0.00 1.77 0.00 0.00 0.00 0.00 0.00 0.00 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1_Ae KnownBoundary 0 50.60 32.82 28.95 19.91 70.54 81.26 72.74 11.17 22.92 49.80 84.34 0.00 12.99 95.83 49.82 132.96 112.11 77.31 92.14 56.50 52.26 47.76 58.56 14 ER1b ExonRegion 0 32.96 22.51 10.94 10.90 43.96 137.93 68.66 4.81 7.76 21.71 48.05 2.78 0.67 68.68 42.69 54.56 67.67 33.39 49.15 34.50 57.14 29.62 27.06 15 ER1c ExonRegion 0 49.74 39.32 20.22 17.49 81.16 171.15 92.68 9.51 20.38 33.83 91.49 4.33 7.04 123.70 71.56 119.88 123.78 70.21 88.66 59.57 81.54 52.44 58.24 16 ER1d ExonRegion 0 59.97 52.20 28.80 20.67 90.98 188.58 114.08 13.54 26.76 42.82 122.74 4.33 9.38 168.91 98.16 191.21 141.94 94.24 110.43 80.14 96.60 74.66 83.20 17 ER1e ExonRegion 0 38.84 26.41 30.38 16.59 51.81 90.40 58.06 17.44 28.76 48.38 101.21 1.03 7.78 72.01 58.95 146.01 96.44 86.59 77.35 51.96 58.75 48.73 57.10 18 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E1a_E6a KnownJunction 0 10.08 2.50 7.69 9.02 0.00 4.71 4.15 10.06 13.14 28.37 20.37 0.00 25.81 7.06 28.56 8.72 20.94 17.99 9.60 12.53 39.23 8.39 4.35 20 E1a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 1.16 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.65 0.47 0.91 0.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.34 2.90 1.13 0.00 0.00 0.74 1.04 22 E2a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER3a ExonRegion 0 0.88 1.70 0.76 0.85 3.36 1.46 1.11 1.70 1.28 0.77 0.84 4.47 1.61 0.57 1.05 1.24 2.76 0.00 0.00 0.89 0.00 0.00 0.00 24 E3a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 1.79 0.00 0.00 0.00 0.00 2.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER4a ExonRegion 0 0.00 0.00 1.84 1.03 8.11 0.00 0.00 1.30 0.93 0.00 0.00 5.40 0.00 0.00 0.00 1.50 1.67 0.00 0.00 2.15 0.00 1.05 0.00 26 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.30 0.00 0.00 0.00 0.00 0.00 0.00 28 ER6a ExonRegion 0 5.34 5.04 24.89 10.30 8.73 6.24 1.61 23.13 27.29 48.09 117.72 11.80 24.85 55.49 34.23 21.58 123.15 33.26 31.10 48.45 101.87 28.65 17.24 29 E6_Da KnownBoundary 0 0.00 16.05 53.93 24.94 16.04 13.63 6.23 40.50 36.02 69.17 147.14 26.41 12.50 138.15 109.15 88.78 136.33 65.95 103.53 96.58 82.23 91.79 68.38 30 ER6b ExonRegion 0 7.18 5.99 29.70 17.81 11.38 11.16 4.66 32.62 29.56 42.79 77.70 45.79 9.97 124.76 94.92 161.92 86.01 52.34 82.19 58.44 62.51 71.10 66.38 31 E6b_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.30 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 32 E6b_E8a KnownJunction 0 7.11 5.99 17.03 13.65 29.97 10.45 5.74 21.40 25.23 26.08 37.17 17.86 32.30 57.51 66.14 111.51 62.55 57.29 35.48 24.93 66.41 15.86 43.71 33 E6b_E9a NovelJunction 0 0.00 0.00 3.96 5.26 11.46 5.34 0.00 4.23 3.76 13.03 0.00 0.00 0.00 0.00 0.00 7.69 8.32 20.52 0.00 5.11 17.11 3.00 4.10 34 E7_Aa NovelBoundary 0 342.06 552.86 722.48 724.42 379.88 419.42 553.54 626.79 560.84 610.98 176.10 103.53 164.27 85.11 92.84 262.75 288.73 520.74 281.42 401.34 162.04 210.64 187.54 35 ER7a ExonRegion 0 2.76 3.58 2.41 0.88 1.13 1.61 1.75 0.88 1.62 1.32 0.97 4.78 7.76 11.75 13.81 1.33 2.76 2.36 1.32 5.25 0.00 0.00 2.63 36 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 1.21 0.00 0.00 7.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 E8_Aa NovelBoundary 0 0.00 2.83 0.00 0.00 0.00 6.47 4.37 2.51 4.83 3.33 0.00 0.00 0.00 0.00 0.00 13.07 4.77 3.94 0.00 8.76 0.00 2.76 0.00 38 ER8a ExonRegion 0 18.00 14.17 17.41 10.36 49.59 67.81 43.30 28.97 27.87 45.42 70.58 39.94 21.74 89.24 48.29 70.51 82.89 41.41 32.34 34.13 73.61 30.27 36.03 39 E8_Da KnownBoundary 0 42.60 18.55 11.97 6.79 11.38 47.53 7.73 26.25 28.99 58.26 65.38 61.07 0.00 108.95 68.85 87.67 97.90 45.56 40.85 33.30 46.64 19.72 32.18 40 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.64 1.67 4.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 41 ER8b ExonRegion 0 31.11 20.39 22.20 5.31 7.78 24.27 15.42 32.95 25.27 60.95 53.77 33.50 14.44 93.81 64.32 65.00 91.56 44.47 27.16 34.13 56.17 28.81 36.32 42 E8_Db KnownBoundary 0 3.70 2.76 2.69 0.00 0.00 7.44 4.11 20.33 3.76 8.73 8.84 0.00 0.00 2.12 19.04 7.86 0.00 8.58 13.65 3.20 0.00 0.00 7.51 43 E8b_E9a KnownJunction 0 36.30 14.08 34.09 6.89 12.48 13.17 17.18 24.69 23.44 67.69 36.85 12.00 20.29 106.95 49.32 78.01 85.83 32.87 13.93 39.05 48.37 22.66 16.48 44 ER8c ExonRegion 0 4.23 3.69 0.82 0.98 3.91 5.39 7.18 7.39 6.44 4.43 6.10 2.87 6.17 7.67 9.92 13.07 9.14 3.44 5.05 4.92 6.74 5.03 5.43 45 E8_Dc NovelBoundary 0 24.97 39.34 41.04 45.68 14.77 29.13 26.32 27.77 39.58 25.89 9.74 13.05 0.00 2.41 4.45 31.87 12.72 53.18 12.24 17.07 13.53 7.72 29.36 46 E9_Aa NovelBoundary 0 14.45 12.76 1.30 4.10 11.21 15.45 2.25 10.02 10.65 11.42 0.00 0.00 0.00 2.47 4.45 0.00 9.26 6.26 13.18 12.40 4.94 6.25 0.00 47 ER9a ExonRegion 0 26.51 28.86 27.31 5.06 17.97 23.84 19.80 28.40 25.76 63.79 49.33 17.94 20.32 99.30 55.81 74.02 76.39 35.37 25.94 32.83 74.61 32.05 24.75 48 ER9b ExonRegion 0 13.70 23.79 31.84 20.86 28.15 55.30 30.53 34.57 44.87 96.39 82.11 38.75 42.10 97.63 71.05 122.46 87.35 77.35 62.55 33.72 91.15 46.46 51.32 49 E9_Db KnownBoundary 0 0.00 8.55 22.00 10.75 3.57 7.27 9.23 17.95 34.64 42.01 54.49 33.61 26.13 47.21 42.40 56.91 41.98 27.86 13.37 12.14 45.59 7.78 19.38 50 ER9c ExonRegion 0 11.46 11.49 15.66 14.32 8.54 32.65 17.89 13.90 20.73 34.51 25.54 13.42 33.20 38.87 35.02 89.65 20.36 44.65 37.18 13.26 19.78 32.95 29.38 51 E9_Dc KnownBoundary 0 3.56 8.42 1.51 0.00 21.05 19.02 26.85 0.00 0.00 4.03 4.95 0.00 0.00 0.00 0.00 4.27 4.68 2.11 4.05 0.00 0.00 0.00 0.00 52 ER9d ExonRegion 0 1.87 2.81 0.19 0.00 0.30 1.26 1.15 0.00 0.10 0.14 0.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.42 53 E9_Dd KnownBoundary 0 3.11 2.76 0.00 5.46 11.21 0.00 0.00 0.00 3.04 4.94 13.79 0.00 0.00 0.00 0.00 15.21 4.77 0.00 20.42 0.00 5.31 0.00 7.77 54 ER9e ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.59 0.00 0.12 0.21 0.00 0.32 0.24 0.00 0.00 0.00 0.00 0.00 0.40 0.00 0.58 55 ER9f ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 4.33 0.00 3.25 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94