Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AARS2 Gene 0 26.70 43.72 64.55 48.70 35.88 49.07 32.02 42.30 46.50 86.33 70.51 24.58 21.55 103.76 94.87 72.05 72.78 104.80 51.51 79.40 88.78 21.21 33.55 2 244571 Transcript 0 22.13 38.00 71.58 49.52 27.44 53.09 29.48 43.87 49.45 98.37 77.89 23.07 19.49 122.54 100.42 81.81 85.14 122.95 54.65 88.59 106.98 21.29 35.74 3 491573 Transcript 0 1.56 2.95 4.27 3.22 3.78 5.23 3.39 3.94 1.57 4.46 3.57 2.59 1.52 2.58 3.57 3.97 6.54 13.43 7.08 3.58 10.12 0.32 3.70 4 ER1a ExonRegion 0 1.79 5.04 7.30 5.47 3.34 5.38 2.29 7.96 7.23 17.21 21.36 3.04 1.22 36.63 32.46 28.71 25.16 28.28 11.59 18.29 24.25 8.53 12.27 5 E1a_E2a KnownJunction 1 10.45 28.81 16.23 25.64 7.39 14.42 4.15 32.57 29.25 55.90 83.71 19.36 6.82 88.23 63.42 109.63 43.85 159.06 45.55 71.33 88.71 8.57 35.17 6 ER2a ExonRegion 0 11.64 41.00 46.67 39.52 29.82 58.13 44.27 43.26 45.98 74.60 82.49 47.83 19.88 110.68 88.91 68.41 79.77 102.65 47.18 77.42 106.01 16.42 26.11 7 E2a_E3a KnownJunction 0 49.12 57.82 68.80 42.85 29.71 40.32 32.55 86.50 52.89 97.72 104.34 51.92 27.11 212.20 187.40 83.91 122.02 140.03 98.45 112.43 142.46 41.09 41.15 8 ER3a ExonRegion 0 20.05 37.30 67.17 43.14 31.01 30.23 29.85 55.70 54.35 116.64 95.39 58.51 29.43 150.88 104.94 103.88 105.36 139.77 75.47 114.12 127.75 22.31 48.27 9 E3a_E4a KnownJunction 0 35.27 74.20 85.18 47.68 48.47 30.38 57.06 64.77 52.37 121.09 98.87 100.83 67.85 177.94 99.14 107.49 99.02 143.14 86.87 103.03 128.50 28.53 55.23 10 ER4a ExonRegion 0 14.30 39.05 55.32 33.55 37.87 44.01 35.01 36.03 56.23 112.43 95.98 47.26 45.00 163.98 91.56 94.35 87.47 132.77 74.99 95.63 123.37 21.72 54.35 11 E4_Da NovelBoundary 0 0.00 22.50 4.29 4.93 4.07 16.69 7.91 7.64 7.55 10.40 0.00 0.00 0.00 2.47 13.35 4.27 9.35 19.32 9.60 15.40 8.28 7.78 7.94 12 E4a_E5a KnownJunction 0 6.96 26.11 37.40 33.33 11.63 53.26 35.64 14.91 46.82 89.10 106.40 30.61 26.46 123.26 119.54 91.86 100.33 99.74 66.54 93.51 118.18 13.90 27.57 13 I4_AR1 ActiveIntronRegion 1 1.59 11.95 1.23 0.00 2.68 5.96 6.62 0.00 2.47 0.00 0.48 0.00 18.76 13.20 0.00 2.97 6.60 1.85 0.00 7.45 11.29 0.00 5.87 14 E5_Aa NovelBoundary 0 3.04 0.00 4.23 4.63 3.99 4.88 12.76 1.68 7.32 9.13 2.63 11.70 0.00 7.06 24.11 3.85 21.79 35.77 18.92 11.63 17.24 10.29 4.35 15 ER5a ExonRegion 0 18.03 31.18 50.16 29.31 33.55 35.83 28.80 31.51 50.73 96.10 94.02 22.63 22.71 127.81 99.82 82.81 86.62 113.12 57.51 91.52 114.67 25.56 39.43 16 E5_Da NovelBoundary 0 3.48 26.90 13.93 20.44 24.70 5.00 33.34 19.02 26.16 42.52 6.74 18.91 13.64 19.90 22.99 7.09 20.48 56.13 30.12 35.67 16.62 5.27 7.94 17 E5a_E6a KnownJunction 0 7.11 24.60 28.38 23.17 18.42 34.70 20.05 14.66 16.64 74.25 43.48 18.76 20.13 106.54 79.12 55.80 47.41 63.30 38.21 73.50 51.09 10.72 7.26 18 E5a_E7a NovelJunction 0 3.63 3.35 5.44 0.00 0.00 2.67 0.00 5.91 5.93 6.42 4.11 6.30 0.00 7.18 0.00 0.00 7.95 8.50 7.72 5.82 8.22 0.00 0.00 19 I5 Intron 0 8.30 14.88 9.55 12.75 25.19 20.14 30.47 12.80 18.29 21.01 12.64 15.19 25.61 21.84 23.52 12.44 24.17 18.98 20.83 25.60 18.44 9.25 9.98 20 I5_SR1 SilentIntronRegion 0 8.35 14.96 9.60 12.81 25.32 20.25 30.63 12.87 18.38 21.12 12.69 15.26 25.75 21.95 23.64 12.50 24.30 19.08 20.93 25.73 18.54 9.30 10.04 21 E6_Aa NovelBoundary 0 6.82 46.37 27.23 25.40 22.07 27.60 14.26 2.26 6.63 18.24 0.00 6.30 7.14 9.42 23.73 19.99 16.83 31.84 25.79 21.09 41.45 5.82 15.19 22 ER6a ExonRegion 0 6.90 18.97 26.01 27.93 8.50 22.01 15.25 16.62 23.27 72.29 45.48 10.05 10.18 77.99 67.03 49.08 47.55 81.10 28.01 65.43 51.83 11.15 23.03 23 E6_Da NovelBoundary 0 0.00 2.63 19.40 5.63 4.33 5.79 14.57 7.39 8.25 7.12 4.90 0.00 6.82 10.01 8.90 8.72 4.49 7.71 4.52 11.95 21.31 0.00 0.00 24 E6a_E7a KnownJunction 0 20.30 18.22 42.10 32.66 7.72 29.24 27.95 21.65 26.01 91.87 77.44 6.00 31.65 95.06 114.10 75.88 81.35 92.32 34.82 118.69 53.87 29.21 24.41 25 E7_Aa NovelBoundary 0 0.00 6.51 27.76 3.23 18.34 2.04 16.30 18.24 11.75 23.69 11.53 5.25 12.82 11.95 9.64 11.88 8.98 36.48 0.00 11.25 22.24 2.33 3.41 26 ER7a ExonRegion 0 18.00 30.49 50.30 43.52 15.86 39.99 27.22 28.83 44.92 87.47 66.96 8.78 15.62 117.52 84.99 71.74 70.56 120.87 44.62 88.48 96.26 21.71 40.49 27 E7a_E8a KnownJunction 1 7.56 28.68 50.91 50.28 42.02 44.01 18.50 44.98 53.27 86.17 77.39 0.00 20.29 120.31 84.55 79.12 106.59 129.17 34.35 102.08 135.66 24.62 59.24 28 ER8a ExonRegion 0 11.83 17.21 67.18 46.34 28.75 54.64 24.75 44.59 57.20 87.78 81.08 23.98 23.09 123.52 87.63 90.38 105.12 136.07 42.47 90.40 133.92 18.59 46.76 29 E8a_E9a KnownJunction 0 20.97 21.11 78.15 39.79 54.58 81.26 45.53 35.94 55.41 75.00 74.91 57.32 13.31 109.19 90.86 103.31 98.55 95.76 51.67 96.39 135.05 11.14 42.17 30 ER9a ExonRegion 0 17.61 36.75 85.86 44.39 30.22 65.18 31.18 43.41 63.00 103.58 85.91 24.82 14.20 127.78 95.46 94.84 94.28 161.36 42.43 100.04 153.02 23.20 34.85 31 E9a_E10a KnownJunction 0 10.45 40.06 82.05 66.33 43.46 51.79 42.31 52.74 76.91 117.41 64.70 24.01 19.48 136.38 156.25 106.30 148.85 209.75 65.70 75.42 145.86 32.27 59.50 32 ER10a ExonRegion 0 11.25 27.79 68.15 53.78 25.62 55.45 36.72 54.58 61.21 131.05 86.04 20.52 16.07 144.27 102.43 89.19 100.75 132.06 60.74 95.43 137.47 24.43 32.59 33 E10a_E11a KnownJunction 0 12.30 21.58 53.04 49.84 18.85 74.45 19.08 36.19 56.08 111.32 60.49 11.10 0.00 108.19 72.07 56.14 114.73 90.74 45.27 72.35 121.27 15.43 15.02 34 ER11a ExonRegion 0 19.12 30.84 75.37 46.97 26.26 65.13 30.78 52.21 62.26 116.80 73.42 15.26 19.76 128.90 122.39 71.58 99.14 126.95 57.62 90.18 131.84 22.57 30.24 35 E11_Da NovelBoundary 0 7.26 0.00 15.35 22.51 4.33 7.44 7.77 16.31 15.45 20.44 9.42 0.00 5.84 23.66 9.64 7.52 8.98 21.35 8.66 8.56 2.59 6.25 8.37 36 E11a_E12a KnownJunction 0 21.04 31.97 40.60 44.62 26.74 67.12 24.33 32.53 39.55 106.35 53.54 18.16 0.00 121.43 78.13 76.48 80.13 98.33 30.68 63.21 107.93 12.12 19.38 37 E12_Aa NovelBoundary 0 0.00 0.00 17.71 3.70 3.40 5.22 11.70 6.74 7.75 28.85 12.85 6.30 0.00 9.65 17.68 3.25 0.00 28.06 9.04 9.97 14.33 5.45 4.01 38 ER12a ExonRegion 0 19.98 30.63 67.83 41.52 36.36 55.82 25.54 32.53 48.74 103.33 66.30 13.64 22.53 116.91 106.98 64.80 78.15 138.11 49.57 86.24 129.66 12.60 35.34 39 E12a_E13a KnownJunction 0 31.71 37.95 76.49 64.99 18.25 46.11 20.14 42.43 56.05 113.76 83.23 29.71 26.46 124.08 89.00 104.76 89.11 135.01 32.94 69.29 122.26 7.72 36.71 40 ER13a ExonRegion 0 14.95 27.11 86.97 44.57 25.61 42.13 25.61 42.64 54.11 107.64 63.72 25.90 9.54 114.63 88.11 54.96 86.89 91.58 47.70 91.15 109.61 16.72 28.03 41 E13_Da NovelBoundary 0 3.78 6.71 8.52 5.49 7.47 7.67 6.36 12.40 26.36 30.00 4.63 7.65 6.49 2.47 8.90 3.16 0.00 23.84 9.22 8.12 19.03 3.12 7.17 42 E13a_E14a KnownJunction 1 26.97 41.24 106.83 50.04 19.78 47.59 28.13 40.46 51.88 126.57 75.55 19.66 0.00 148.51 87.15 90.32 118.56 127.26 53.27 111.28 104.40 11.21 39.61 43 ER14a ExonRegion 0 12.01 26.34 96.14 49.42 24.78 75.86 25.29 55.36 60.29 112.32 84.99 16.77 17.36 122.91 94.57 83.85 82.55 161.29 64.79 90.69 107.73 20.16 38.66 44 E14a_E15a KnownJunction 1 19.71 34.07 96.15 60.63 39.05 53.61 22.79 66.62 52.02 113.17 90.18 0.00 20.45 120.02 101.24 70.67 68.63 146.74 51.20 89.80 102.49 19.84 35.60 45 ER15a ExonRegion 0 12.15 36.00 85.77 52.88 34.59 53.90 25.58 42.94 55.66 110.10 70.97 9.32 15.06 126.42 88.70 76.76 67.86 108.03 44.92 98.46 107.79 22.12 30.54 46 E15a_E16a KnownJunction 0 32.23 63.08 89.38 56.60 15.87 55.76 23.67 62.93 52.75 88.00 74.55 36.76 43.83 98.06 68.85 72.46 86.02 139.12 70.31 65.52 122.75 22.11 31.16 47 ER16a ExonRegion 0 23.86 42.37 70.28 55.25 28.80 56.36 26.96 57.07 51.84 103.85 83.29 19.33 20.12 118.80 90.07 66.82 66.98 145.79 60.03 92.07 99.33 22.75 30.81 48 E16_Da NovelBoundary 0 6.45 0.00 35.04 11.22 11.54 4.71 12.41 31.50 23.12 28.37 24.69 0.00 13.15 12.07 17.18 23.58 13.28 43.44 9.22 15.02 23.91 10.78 19.89 49 E16a_E17a KnownJunction 1 26.75 39.53 74.24 63.59 16.13 77.29 28.44 48.18 51.79 108.68 63.96 12.60 0.00 115.02 101.98 87.93 66.20 105.66 58.45 100.86 95.75 13.17 30.56 50 Ix Intron 0 10.45 7.36 13.82 12.03 9.68 4.83 6.97 13.56 11.51 14.06 8.90 3.52 6.35 15.57 12.41 10.76 9.77 13.30 17.82 7.00 7.25 2.06 7.73 51 Ix_AR2 ActiveIntronRegion 0 6.88 4.07 9.80 7.50 2.68 0.00 2.81 5.40 9.11 9.75 2.42 4.33 0.00 11.37 11.61 2.97 8.66 12.24 25.48 4.26 6.61 2.08 6.97 52 Ix_SR1 SilentIntronRegion 0 12.80 8.18 20.32 16.96 9.02 8.53 6.84 17.69 17.67 21.71 7.78 7.25 4.91 25.31 19.03 10.16 17.04 20.63 24.82 10.24 8.87 0.92 15.98 53 Ix_AR1 ActiveIntronRegion 0 11.61 10.37 13.70 13.87 14.31 5.30 10.54 17.26 12.08 15.32 13.72 2.77 10.75 15.99 12.25 16.39 8.25 13.17 15.75 8.10 8.29 2.95 5.26 54 E17_Aa NovelBoundary 0 7.56 12.63 29.42 11.22 8.32 29.19 12.63 16.43 10.07 28.37 16.85 0.00 13.47 23.54 17.80 11.79 13.00 39.05 4.80 15.72 11.43 2.33 3.59 55 ER17a ExonRegion 0 23.18 24.66 59.75 49.69 22.24 48.44 23.18 34.30 35.12 89.66 61.94 8.54 11.57 107.18 91.30 63.89 58.69 61.87 39.10 73.84 66.48 12.29 32.41 56 E17a_E18a KnownJunction 0 24.75 37.89 100.65 42.05 10.87 73.54 28.18 35.98 34.52 71.96 38.17 12.60 0.00 106.19 107.30 62.97 50.40 70.51 56.66 93.57 62.27 14.57 35.85 57 ER18a ExonRegion 0 14.33 36.47 81.53 51.10 14.86 46.81 22.67 30.87 45.30 85.81 83.37 11.37 9.30 125.44 116.19 60.89 76.05 85.72 49.70 81.59 77.36 26.68 32.85 58 E18_Da NovelBoundary 0 3.78 3.35 4.58 3.66 0.00 2.90 7.86 6.28 5.06 10.83 0.00 0.00 0.00 2.18 25.34 12.90 4.68 20.56 4.80 3.13 12.23 0.00 28.26 59 E18a_E19a KnownJunction 0 30.82 43.54 110.55 68.89 20.12 82.23 44.74 41.90 51.30 123.91 73.33 7.65 14.77 166.52 115.83 115.78 99.21 170.25 80.47 84.95 106.44 41.27 68.72 60 ER19a ExonRegion 0 32.36 38.56 89.12 59.73 27.87 46.89 30.55 42.04 38.19 78.88 97.32 20.87 14.11 100.37 127.92 77.01 86.42 117.06 58.86 83.07 100.68 23.35 32.36 61 E19a_E20a KnownJunction 0 49.05 67.55 134.68 81.47 46.60 86.54 41.29 71.55 54.43 114.62 114.77 13.80 19.80 129.85 93.83 104.08 118.56 183.93 75.77 107.32 101.81 38.27 44.82 62 ER20a ExonRegion 0 35.37 52.96 106.61 82.05 31.69 68.10 38.72 53.12 67.08 110.69 101.33 16.16 30.54 139.85 122.30 92.33 88.17 190.69 67.60 95.46 107.10 29.22 35.50 63 E20_Ab KnownBoundary 0 60.75 58.74 122.79 101.82 42.61 68.88 50.92 54.55 85.36 119.29 86.07 67.52 61.52 161.40 104.09 74.60 94.44 234.71 29.18 98.43 130.91 37.96 20.40 64 ER20b ExonRegion 0 53.78 44.58 110.35 94.95 27.37 64.42 34.93 52.25 70.40 120.22 76.47 28.31 30.79 134.59 108.24 85.20 91.92 196.38 58.15 77.52 120.47 38.63 40.13 65 E20a_E21a KnownJunction 1 82.09 22.63 131.01 127.02 28.18 76.26 40.98 74.02 69.96 153.44 72.91 42.01 0.00 123.73 111.26 107.58 111.92 223.31 108.71 71.33 116.94 44.64 57.19 66 ER21a ExonRegion 0 45.02 53.31 107.53 85.76 30.47 67.39 26.42 53.15 57.93 109.45 96.09 37.68 17.79 114.99 147.83 92.19 80.83 161.02 61.30 89.34 100.70 30.71 43.23 67 E21_Da KnownBoundary 0 0.00 2.63 8.28 3.53 0.00 0.00 6.58 2.22 0.00 1.13 0.00 0.00 0.00 5.47 0.00 0.00 13.74 10.74 9.60 0.00 0.00 0.00 0.00 68 E21a_E21b KnownJunction 1 58.83 89.66 134.44 105.41 30.56 90.23 33.65 78.57 70.86 128.75 106.97 6.30 33.93 123.14 170.59 110.31 65.36 156.45 61.55 104.63 147.77 40.90 23.99 69 ER21b ExonRegion 0 1.56 2.95 4.27 3.22 3.78 5.23 3.39 3.94 1.57 4.46 3.57 2.59 1.52 2.58 3.57 3.97 6.54 13.43 7.08 3.58 10.12 0.32 3.70 70 E21_Ab KnownBoundary 0 0.00 2.83 3.67 3.30 11.97 17.77 14.53 6.94 5.99 5.35 0.00 0.00 6.49 0.00 0.00 0.00 0.00 6.92 0.00 3.07 2.41 0.00 3.41 71 ER21c ExonRegion 1 36.97 52.58 120.02 83.15 49.84 76.76 45.07 68.35 56.50 116.52 94.36 9.94 40.42 136.98 148.01 78.86 73.88 152.54 50.39 94.98 98.88 28.76 39.13 72 E21_Db KnownBoundary 0 65.05 77.42 183.44 140.41 98.30 87.51 39.66 90.86 56.31 164.77 115.66 18.31 71.42 171.64 154.27 138.77 118.37 223.27 88.85 134.55 136.59 36.62 80.92 73 ER21d ExonRegion 0 66.33 99.52 84.85 80.33 81.37 72.37 60.10 66.96 64.07 99.51 86.02 44.19 39.32 111.51 133.04 102.73 92.21 109.54 76.86 103.43 85.50 34.19 47.35