Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	MRPL2	Gene	0	44.72	18.55	51.35	36.31	37.52	40.15	21.89	31.56	25.07	36.53	90.39	28.79	20.23	93.20	128.00	68.84	61.79	32.90	37.75	28.93	42.75	30.43	26.60
2	388752	Transcript	0	0.75	1.69	1.91	1.54	2.53	5.48	2.06	2.14	6.05	4.51	2.87	1.25	0.27	1.03	0.52	2.98	2.40	4.82	7.07	2.42	5.45	1.91	2.73
3	468957	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	489623	Transcript	0	0.00	6.71	21.23	11.52	12.73	34.92	4.50	16.22	5.79	13.51	17.53	12.60	6.49	10.12	51.42	29.91	23.47	21.27	25.98	14.96	17.92	2.33	29.96
5	487429	Transcript	0	5.22	2.66	6.25	2.49	4.44	4.02	3.67	0.67	2.51	1.58	3.36	4.85	12.45	7.18	11.78	4.82	3.84	2.81	1.05	3.36	3.56	2.96	3.53
6	491898	Transcript	0	40.43	7.55	26.07	27.76	25.21	14.38	15.99	18.97	14.89	16.63	25.35	15.71	9.49	27.29	25.76	27.85	19.37	12.81	13.78	7.42	7.30	15.66	14.18
7	480286	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	230413	Transcript	0	0.00	0.00	5.20	11.75	4.16	2.73	2.03	1.68	3.27	7.79	14.11	5.85	6.82	11.95	24.85	8.03	17.48	9.58	4.80	3.26	0.00	2.82	3.84
9	470667	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	485654	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11	ER1a	ExonRegion	0	0.98	1.85	3.35	2.83	2.59	8.20	1.96	3.63	6.09	6.93	3.01	1.97	0.53	1.36	1.05	2.97	4.80	7.53	9.25	3.23	8.70	3.81	3.25
12	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	2.90	2.12	0.00	0.00	1.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.49	0.00	0.00	0.00	0.00	0.00
14	E1_Ad	KnownBoundary	0	3.78	6.71	0.00	0.00	0.00	2.90	0.00	0.00	1.79	0.00	2.58	0.00	0.00	0.00	0.00	4.36	9.54	0.00	0.00	0.00	3.15	3.12	0.00
15	E1_Ae	KnownBoundary	0	0.00	3.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.35
16	E1_Af	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.49	0.00	0.00	0.00	0.00	0.00
17	ER1b	ExonRegion	0	4.23	6.10	2.45	1.36	2.68	3.67	1.32	1.73	3.71	3.44	3.87	0.00	0.00	4.87	5.80	2.97	6.60	3.70	3.19	0.00	6.61	2.08	2.94
18	ER1c	ExonRegion	0	14.65	16.11	4.52	4.09	10.29	32.30	7.23	2.53	4.66	5.56	16.06	0.00	0.00	21.74	17.41	13.72	24.12	7.39	6.86	1.96	13.22	6.41	6.55
19	E1_Ag	KnownBoundary	1	119.95	65.51	14.01	15.82	121.56	209.25	77.46	2.55	8.30	8.11	96.87	0.00	0.00	71.40	84.18	89.29	111.27	19.52	56.94	35.47	80.37	49.29	38.16
20	ER1d	ExonRegion	1	35.98	29.28	13.72	11.45	29.43	87.66	22.77	5.19	7.90	9.86	49.87	0.00	0.00	65.94	61.51	39.23	46.87	24.76	19.11	8.09	39.67	21.67	18.21
21	ER1e	ExonRegion	1	68.15	48.60	25.98	19.35	62.34	149.64	45.15	11.23	13.71	14.34	82.15	0.00	0.00	123.60	111.70	67.47	88.79	40.10	34.40	25.53	61.70	34.17	27.60
22	ER1f	ExonRegion	1	107.77	58.13	31.76	22.60	91.64	220.51	69.07	14.40	17.39	19.98	104.86	3.61	0.00	154.97	165.85	97.09	119.11	46.66	54.68	31.21	78.42	41.15	37.93
23	E1_Ah	KnownBoundary	1	400.89	89.66	66.73	51.94	298.56	414.31	188.35	52.29	22.51	40.37	258.33	18.61	0.00	443.70	460.97	284.54	178.59	108.52	137.60	57.27	158.95	108.93	135.47
24	ER1g	ExonRegion	1	233.31	84.47	51.28	42.56	196.98	355.40	138.56	31.51	20.90	32.82	217.82	7.33	0.00	345.13	343.35	231.71	192.09	89.76	101.56	57.94	155.02	93.52	102.56
25	ER1h	ExonRegion	1	107.58	29.24	48.07	29.87	70.12	117.32	52.62	21.58	16.51	31.76	89.71	9.98	19.79	119.17	112.72	114.57	63.72	62.44	48.56	29.92	65.17	33.97	46.45
26	E1_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	2.90	0.00	0.00	1.79	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.58	0.00	0.00	3.13	5.75	0.00	0.00
27	E1a_E2a	KnownJunction	0	39.04	21.05	28.53	15.85	11.88	25.33	4.24	9.65	12.62	28.10	55.54	31.81	43.50	54.51	60.45	26.75	47.78	9.87	0.00	11.51	50.29	0.00	4.01
28	ER1i	ExonRegion	0	0.00	0.00	3.84	1.03	1.24	0.48	1.71	0.00	1.88	0.00	1.55	0.00	0.00	2.07	0.88	0.64	0.00	1.38	0.00	0.36	0.81	2.42	1.66
29	E1_Db	NovelBoundary	0	3.78	0.00	12.21	9.26	0.00	0.00	0.00	2.55	8.30	13.48	0.00	0.00	6.33	2.71	0.00	4.36	0.00	7.50	4.80	3.26	17.48	8.14	3.59
30	E1b_E2a	KnownJunction	0	0.00	0.00	6.27	3.06	0.00	0.00	0.00	0.00	1.62	0.00	2.63	0.00	0.00	5.47	6.18	4.36	0.00	1.95	0.00	0.00	0.00	3.12	3.41
31	ER2a	ExonRegion	0	40.89	24.93	105.22	76.65	37.81	39.55	27.18	56.29	35.83	68.22	205.07	65.20	30.69	256.77	275.98	161.55	150.79	78.41	90.96	63.92	110.42	69.05	57.20
32	E2_Da	KnownBoundary	0	0.00	8.49	31.25	25.70	12.99	26.63	8.04	13.80	7.49	15.63	7.79	6.45	0.00	7.30	10.63	4.36	16.92	4.31	9.60	5.82	11.24	25.84	11.87
33	E2a_E3a	KnownJunction	0	81.05	56.70	71.35	79.74	84.72	70.36	22.35	50.36	49.94	63.39	173.78	24.16	65.58	164.93	296.19	73.91	128.00	67.78	70.59	59.44	62.89	42.74	24.76
34	E2a_E5a	KnownJunction	1	0.00	6.71	21.23	11.52	12.73	34.92	4.50	16.22	5.79	13.51	17.53	12.60	6.49	10.12	51.42	29.91	23.47	21.27	25.98	14.96	17.92	2.33	29.96
35	ER2b	ExonRegion	0	7.23	7.29	19.13	16.77	31.55	41.47	18.50	9.52	8.31	10.45	9.48	8.10	5.71	11.81	19.97	8.51	8.62	5.40	5.48	7.61	7.26	8.66	7.59
36	E2_Db	KnownBoundary	0	13.34	9.41	7.92	8.96	16.13	15.39	12.76	4.39	15.74	6.23	11.63	12.60	6.49	11.36	25.84	8.54	7.48	12.27	4.80	9.46	17.54	0.00	7.51
37	ER2c	ExonRegion	1	15.65	7.97	8.65	3.39	12.09	11.58	9.29	2.00	4.03	4.75	5.89	14.56	37.34	13.99	28.28	9.45	11.51	5.11	3.16	9.72	9.87	3.35	5.53
38	E2_Dc	NovelBoundary	0	1949.16	1648.13	2795.11	3315.40	1266.30	1110.16	1932.12	3011.14	3051.94	2567.98	444.48	196.41	309.88	202.96	585.08	1954.70	1235.90	4388.59	1785.65	1867.79	850.24	743.07	1800.82
39	E3_Aa	NovelBoundary	0	22.60	0.00	11.35	5.13	44.48	21.18	5.48	10.39	6.25	10.40	6.58	5.85	6.49	21.01	8.90	12.39	7.57	6.34	9.13	0.00	2.66	2.45	12.21
40	ER3a	ExonRegion	0	64.64	43.51	101.48	67.03	85.74	107.51	59.73	64.87	49.75	82.30	231.27	94.10	48.82	235.58	308.49	135.95	141.72	53.73	58.21	66.71	96.71	49.00	37.08
41	E3_Da	NovelBoundary	1	16.74	18.55	15.52	11.69	7.64	10.85	10.64	10.76	4.69	15.77	0.00	25.81	6.17	4.94	8.90	11.54	17.95	8.54	9.13	0.00	3.15	6.25	4.01
42	E3a_E4a	KnownJunction	0	139.43	55.06	149.67	76.85	57.05	49.74	46.81	94.63	72.31	105.19	316.71	136.84	50.81	312.14	430.81	217.89	162.23	56.09	84.90	93.13	113.24	65.89	84.00
43	E4_Aa	NovelBoundary	0	0.00	3.03	15.70	10.85	3.99	19.82	11.61	11.34	4.31	10.23	14.53	5.85	0.00	7.18	14.71	7.60	4.11	10.16	8.85	6.39	12.23	5.02	0.00
44	ER4a	ExonRegion	0	149.85	35.73	159.94	99.96	80.55	60.67	40.78	99.86	73.51	120.50	288.40	76.40	58.63	292.47	392.72	172.64	190.34	77.84	83.59	90.99	113.15	86.48	55.85
45	E4_Da	KnownBoundary	0	36.23	0.00	22.77	18.65	11.12	15.84	11.70	8.83	5.12	14.42	19.22	0.00	0.00	9.06	42.03	10.34	8.60	10.11	8.94	5.62	33.85	3.12	6.57
46	E4a_E4b	KnownJunction	0	140.32	45.72	156.59	102.08	48.39	33.33	21.51	92.05	62.64	104.68	179.68	44.56	24.02	192.83	278.88	144.66	201.40	64.87	28.61	104.06	98.35	72.13	44.13
47	E4a_E4d	NovelJunction	0	0.00	0.00	1.48	0.00	0.00	0.00	1.99	0.00	0.00	1.67	7.48	0.00	0.00	2.30	0.00	3.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	ER4b	ExonRegion	0	19.19	9.59	19.54	12.80	9.94	7.83	8.34	10.98	4.19	10.66	18.62	5.73	0.70	16.59	28.62	25.54	11.33	10.49	5.08	5.78	17.96	3.29	9.05
49	E4_Ab	KnownBoundary	0	20.52	11.51	15.76	11.02	10.95	2.67	7.42	9.78	6.51	7.49	9.05	5.70	0.00	17.66	28.80	25.72	4.39	6.67	9.32	9.08	7.78	5.27	8.02
50	ER4c	ExonRegion	0	80.35	61.06	142.15	100.09	95.65	84.00	49.72	89.74	76.49	106.01	266.46	82.06	58.41	254.12	390.83	157.90	172.91	76.58	69.64	78.10	105.16	65.20	58.68
51	E4_Db	KnownBoundary	0	33.71	6.31	3.81	8.59	8.66	0.00	8.08	0.00	0.00	0.00	11.69	0.00	6.66	5.18	20.77	4.02	4.02	3.07	0.00	0.00	2.29	3.06	4.27
52	E4b_E4d	KnownJunction	0	27.19	42.16	138.82	62.03	135.91	90.46	46.59	60.30	64.47	88.89	266.07	55.37	26.13	237.15	326.60	110.06	148.39	63.38	43.20	89.10	77.84	43.66	36.19
53	E4b_E5a	KnownJunction	0	0.00	0.00	5.20	11.75	4.16	2.73	2.03	1.68	3.27	7.79	14.11	5.85	6.82	11.95	24.85	8.03	17.48	9.58	4.80	3.26	0.00	2.82	3.84
54	E4_Dc	KnownBoundary	0	14.60	9.67	3.90	10.35	3.74	5.11	6.76	6.08	3.76	3.92	12.06	6.30	0.00	2.47	14.59	7.78	4.77	1.91	0.00	0.00	2.78	7.78	0.00
55	ER4d	ExonRegion	0	38.52	12.20	12.25	16.90	13.91	6.23	15.36	7.26	3.71	6.88	22.81	8.66	5.63	12.02	29.59	11.89	6.60	9.24	4.46	2.55	5.73	8.33	2.94
56	ER4e	ExonRegion	0	40.43	7.55	26.07	27.76	25.21	14.38	15.99	18.97	14.89	16.63	25.35	15.71	9.49	27.29	25.76	27.85	19.37	12.81	13.78	7.42	7.30	15.66	14.18
57	E4_Ac	KnownBoundary	0	33.86	9.74	29.74	21.88	19.61	16.58	11.26	27.07	14.47	17.41	15.42	0.00	0.00	21.25	20.15	8.46	26.55	8.42	13.55	8.25	2.97	8.82	0.00
58	ER4f	ExonRegion	0	24.86	14.67	28.07	18.34	21.05	17.73	12.74	21.84	12.24	14.42	23.86	11.02	15.82	22.49	28.28	14.14	17.04	12.11	11.94	8.04	11.09	16.63	12.99
59	E4_Ad	KnownBoundary	0	0.00	14.21	2.90	7.52	8.32	15.39	1.77	3.61	1.79	2.74	11.48	0.00	13.64	0.00	4.45	4.10	4.49	6.18	4.61	0.00	0.00	0.00	7.68
60	E4_Dd	KnownBoundary	0	7.19	6.31	10.02	6.49	8.40	5.79	4.42	8.91	9.49	9.51	9.90	0.00	6.66	4.59	4.94	0.00	3.74	2.07	4.80	7.73	3.03	2.76	3.24
61	ER4g	ExonRegion	0	19.05	48.81	124.99	72.91	144.49	95.36	38.39	67.41	75.34	103.22	267.71	64.94	46.90	227.38	345.25	104.02	153.49	66.52	38.22	96.81	73.82	41.67	46.99
62	ER4h	ExonRegion	0	22.09	25.18	141.07	85.73	82.91	37.71	18.91	80.14	80.51	105.11	194.79	69.76	46.17	163.14	305.00	117.46	94.01	82.89	36.61	80.43	78.19	63.36	51.99
63	E4_De	NovelBoundary	0	20.97	11.38	12.63	7.92	3.74	7.44	6.40	9.12	10.94	13.91	16.90	23.86	0.00	14.30	4.70	3.76	17.11	6.84	3.67	6.01	5.31	0.00	6.57
64	E4e_E5a	KnownJunction	0	52.01	38.02	156.91	114.34	67.15	40.89	13.25	103.18	77.63	99.82	212.26	140.00	59.09	224.21	292.36	258.22	126.23	148.65	99.77	82.01	78.64	100.61	85.28
65	Ix	Intron	0	20.46	5.70	7.42	11.10	17.62	9.76	4.08	8.66	7.99	7.18	14.36	7.42	2.16	9.17	14.90	12.50	4.16	7.07	12.05	3.88	6.48	5.55	6.99
66	Ix_SR1	SilentIntronRegion	0	20.69	5.76	7.51	11.22	17.82	9.87	4.13	8.76	8.08	7.26	14.52	7.50	2.19	9.27	15.06	12.64	4.21	7.15	12.18	3.92	6.56	5.61	7.07
67	E5_Aa	NovelBoundary	0	3.56	15.39	10.97	26.64	8.66	13.91	10.11	20.41	9.52	7.58	13.90	5.70	20.13	7.18	11.00	28.37	0.00	8.33	28.80	12.14	10.32	2.76	12.38
68	ER5a	ExonRegion	0	144.14	38.48	116.12	85.07	63.51	47.93	30.04	78.68	56.09	79.00	220.79	59.50	42.94	193.76	324.47	201.10	151.49	81.07	133.81	61.77	92.50	82.54	74.79
69	E5_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.67	2.05	0.00	0.00	0.00	0.00	0.00	0.00	2.45	0.00	0.00	2.53	0.00	0.00
70	E5_Db	KnownBoundary	0	0.00	0.00	0.00	1.96	4.24	0.00	2.21	0.00	1.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.03	0.00	0.00	0.00	0.00	0.00
71	ER5b	ExonRegion	0	0.00	0.00	0.82	1.36	5.35	0.61	3.09	0.00	0.00	2.29	3.87	4.33	0.00	1.62	3.87	0.00	0.00	1.85	3.19	0.00	1.47	0.00	0.00
72	ER5c	ExonRegion	0	0.53	1.53	0.46	0.25	2.48	2.76	2.17	0.65	6.01	2.08	2.72	0.53	0.00	0.70	0.00	2.99	0.00	2.10	4.90	1.61	2.21	0.00	2.21