Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GUCA1B Gene 0 5.61 3.31 11.02 28.94 9.04 3.84 8.78 11.02 11.58 9.29 1.41 1.10 0.66 3.96 6.45 3.69 1.41 10.93 8.04 6.10 9.99 1.07 4.40 2 372949 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 435292 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 230361 Transcript 0 4.31 1.88 12.89 26.33 6.39 1.53 5.48 7.68 9.90 8.64 0.62 1.62 0.30 3.46 6.18 2.22 0.52 7.49 4.85 5.57 6.01 0.16 4.69 5 IG10 Intergenic 0 12.07 12.97 13.04 34.80 32.98 15.60 23.31 14.24 16.19 16.09 2.28 6.45 7.59 4.38 10.24 7.62 5.08 12.21 13.53 10.42 7.71 2.70 10.31 6 IG10_SR1 SilentIntergenicRegion 0 12.23 13.23 13.25 35.43 33.59 15.64 23.63 14.47 16.55 16.38 2.33 6.59 7.75 4.39 10.47 7.78 5.16 12.30 13.60 10.53 7.72 2.73 10.39 7 IG10_AR2 ActiveIntergenicRegion 0 7.85 1.85 3.68 6.81 8.03 22.66 11.30 5.19 0.00 3.44 0.00 0.00 0.00 3.93 0.00 0.00 2.86 10.72 15.36 7.00 9.84 1.71 10.96 8 ER1a ExonRegion 0 4.80 1.44 2.57 10.37 5.68 0.54 7.46 2.53 4.46 1.45 0.19 0.00 0.00 2.38 6.51 0.00 2.50 4.96 4.58 4.46 11.29 1.42 0.00 9 E1_Ab KnownBoundary 0 14.15 8.35 9.96 30.50 11.21 2.21 20.54 15.61 18.40 6.45 2.63 0.00 0.00 2.47 0.00 0.00 8.32 16.04 9.60 9.20 23.54 5.39 3.24 10 ER1b ExonRegion 0 3.99 4.27 13.82 35.30 11.88 9.53 14.41 16.60 17.43 15.98 1.93 0.60 0.65 3.39 5.63 6.02 3.56 21.50 12.89 9.50 12.81 1.95 5.46 11 E1_Da NovelBoundary 0 11.04 6.05 12.09 42.09 11.46 2.90 15.32 7.06 19.79 32.93 2.47 6.30 6.01 0.00 4.45 12.90 0.00 38.10 21.93 11.25 20.45 0.00 8.71 12 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 13 I1 Intron 0 14.18 12.48 9.72 34.50 24.30 8.27 17.35 13.42 14.92 15.27 1.33 2.07 4.93 2.95 7.16 5.18 3.17 8.12 8.45 10.37 8.49 1.60 7.00 14 I1_AR1 ActiveIntronRegion 0 5.34 11.06 6.21 24.73 16.32 9.76 18.88 10.19 13.42 9.40 1.00 0.35 0.24 2.43 2.93 3.83 2.35 14.74 7.46 9.96 11.33 0.54 5.84 15 I1_SR1 SilentIntronRegion 0 18.37 31.07 14.01 37.72 34.16 21.35 25.08 12.69 15.95 22.27 0.49 1.67 0.75 4.76 10.55 4.10 3.56 15.75 16.17 13.06 10.19 2.53 3.64 16 I1_AR2 ActiveIntronRegion 0 14.47 19.69 16.34 52.76 24.04 16.58 25.84 13.63 22.53 24.82 0.31 2.97 5.47 4.01 6.42 4.56 4.75 15.79 13.54 17.69 10.07 1.74 9.74 17 I1_AR3 ActiveIntronRegion 0 12.19 13.04 10.63 37.69 29.67 11.52 32.49 17.25 12.75 16.21 4.83 0.00 1.43 1.41 1.39 1.23 0.00 0.00 5.82 7.72 6.23 1.18 2.30 18 I1_SR2 SilentIntronRegion 0 11.49 15.31 11.49 47.08 32.49 14.15 23.48 17.71 20.13 19.65 1.79 1.09 5.97 1.98 9.76 4.35 1.89 3.70 7.06 11.33 4.13 2.26 7.64 19 I1_AR4 ActiveIntronRegion 0 19.41 8.87 7.28 30.77 23.36 4.28 15.61 14.17 13.10 10.16 0.93 2.08 3.01 2.81 7.31 5.37 2.87 6.21 7.97 11.25 8.50 1.77 7.55 20 I1_SR3 SilentIntronRegion 0 11.66 9.35 9.06 29.12 21.80 4.42 12.00 11.84 12.65 15.02 1.85 2.61 7.71 2.94 6.76 6.09 3.61 6.85 6.81 6.97 8.83 1.23 6.55 21 E2_Aa NovelBoundary 0 6.67 9.27 13.33 32.66 14.52 2.56 15.24 15.07 14.87 17.11 2.21 0.00 6.66 0.00 0.00 4.36 12.81 13.68 11.39 3.26 14.21 2.63 8.28 22 ER2a ExonRegion 0 16.23 5.15 9.60 34.02 17.23 2.85 12.72 13.31 13.40 5.23 2.82 3.64 0.16 7.29 9.63 4.22 0.00 6.48 8.96 6.94 19.69 1.35 7.24 23 E2_Da NovelBoundary 0 3.33 0.00 13.13 12.45 7.30 0.00 8.21 2.26 8.51 3.01 0.00 0.00 0.00 2.47 0.00 4.19 4.77 3.44 0.00 3.26 2.97 0.00 3.67 24 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E2a_E6a KnownJunction 0 12.52 11.51 19.84 36.76 12.31 5.17 10.60 13.51 10.39 8.54 4.90 0.00 6.01 2.47 9.64 3.42 0.00 3.69 7.53 2.81 8.53 0.00 3.76 26 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 E5a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER6a ExonRegion 0 4.60 8.64 12.27 30.24 7.61 5.01 8.87 13.04 9.98 8.94 1.18 0.00 3.22 3.05 6.30 4.23 2.63 9.27 19.01 0.73 13.29 3.94 4.08 33 E6_Ab KnownBoundary 0 10.37 6.05 12.60 31.63 4.24 0.00 8.66 13.92 9.61 12.30 0.00 0.00 0.00 2.30 5.69 8.63 0.00 12.97 25.69 2.43 12.23 5.69 0.00 34 ER6b ExonRegion 0 1.69 4.26 10.57 35.56 4.91 0.00 8.51 13.73 10.04 11.51 3.15 0.00 3.04 3.07 2.79 9.14 0.00 13.04 9.32 3.98 10.61 1.23 2.77 35 E6a_E7a KnownJunction 0 0.00 0.00 9.02 43.48 7.64 0.00 0.00 13.55 11.52 8.35 4.90 0.00 0.00 4.94 5.81 11.02 0.00 16.46 17.79 2.43 11.24 0.00 0.00 36 ER7a ExonRegion 0 4.09 0.00 9.94 46.25 3.49 0.00 6.30 9.66 12.78 6.31 2.61 1.88 0.00 6.25 12.49 5.43 0.00 12.37 7.13 5.64 8.67 0.00 1.85 37 E7_Da KnownBoundary 0 2.82 0.00 9.79 49.61 4.24 0.00 7.20 6.08 13.66 5.53 0.00 6.30 0.00 7.00 4.45 3.25 0.00 10.61 0.00 5.56 8.65 0.00 4.27 38 ER7b ExonRegion 0 3.90 1.49 17.45 31.66 5.58 1.27 6.56 6.80 12.17 10.94 0.64 3.23 0.00 2.55 5.76 3.30 0.00 9.55 6.25 6.76 6.90 0.00 6.37 39 ER7c ExonRegion 0 8.58 4.07 11.71 35.59 14.87 8.86 7.94 10.18 12.63 10.07 0.00 0.00 0.00 3.25 6.77 2.97 0.00 14.37 1.77 10.76 4.41 0.00 2.94 40 ER7d ExonRegion 0 4.71 2.27 8.34 21.00 7.21 1.79 4.41 8.55 7.63 6.33 0.61 0.00 0.61 4.36 6.59 1.14 1.04 5.43 3.45 4.39 5.12 0.33 3.02 41 IG9_AR1 ActiveIntergenicRegion 0 15.04 11.02 15.56 39.88 17.34 2.28 7.48 6.88 10.67 8.50 2.74 0.63 0.29 3.79 8.70 5.02 2.35 6.04 5.66 8.35 9.20 1.30 6.00