Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	CCND3	Gene	0	187.68	29.22	64.42	35.42	139.21	83.38	43.82	74.44	60.53	61.63	145.99	47.92	28.39	285.31	145.41	186.59	159.57	69.00	39.85	53.73	79.89	86.33	62.39
2	415497	Transcript	0	3.26	3.03	8.54	8.89	11.80	2.73	0.00	23.08	21.73	7.79	19.90	0.00	0.00	9.77	19.41	4.36	21.22	2.28	0.00	3.13	8.71	14.14	7.09
3	372988	Transcript	0	9.63	0.00	20.76	6.63	11.71	10.45	1.85	19.22	21.44	15.58	19.00	0.00	0.00	19.01	5.44	18.37	34.13	0.00	33.22	0.00	13.90	16.59	8.11
4	414200	Transcript	0	0.00	0.00	1.83	1.50	0.00	0.00	6.54	3.98	0.00	3.73	5.11	0.00	0.00	4.77	0.00	7.60	8.32	2.24	0.00	2.68	3.03	8.82	3.59
5	372991	Transcript	1	41.49	19.90	34.15	6.49	8.11	41.01	8.94	27.83	21.48	40.63	113.34	43.74	6.41	126.01	114.41	75.07	111.55	43.88	13.08	38.03	63.54	25.01	29.07
6	372987	Transcript	0	3.34	0.34	0.41	0.80	3.45	0.71	0.45	0.88	0.62	1.67	2.62	0.20	0.00	3.35	1.92	2.17	2.62	0.63	0.00	0.24	1.48	0.47	0.33
7	ER1a	ExonRegion	0	112.53	4.12	7.90	2.94	75.76	48.93	25.27	9.91	11.92	7.52	10.50	0.55	0.05	9.54	7.25	13.05	11.85	3.17	19.16	4.27	4.83	17.70	12.02
8	E1_Da	NovelBoundary	0	13.56	0.00	6.06	9.12	0.00	2.73	0.00	3.94	18.14	4.08	0.00	0.00	0.00	4.77	6.18	4.36	21.32	4.60	4.52	20.20	0.00	0.00	20.06
9	E1a_E4a	KnownJunction	0	9.63	0.00	20.76	6.63	11.71	10.45	1.85	19.22	21.44	15.58	19.00	0.00	0.00	19.01	5.44	18.37	34.13	0.00	33.22	0.00	13.90	16.59	8.11
10	E1a_E5a	KnownJunction	0	3.26	3.03	8.54	8.89	11.80	2.73	0.00	23.08	21.73	7.79	19.90	0.00	0.00	9.77	19.41	4.36	21.22	2.28	0.00	3.13	8.71	14.14	7.09
11	I1	Intron	0	168.19	9.82	9.04	21.81	126.58	15.99	27.01	19.65	16.43	6.03	2.05	2.88	6.70	3.17	4.52	8.82	8.62	4.94	5.94	6.00	1.88	3.32	6.58
12	I1_AR1	ActiveIntronRegion	0	43.73	3.72	6.39	9.37	45.12	10.03	16.28	8.36	11.74	6.53	3.16	2.09	3.48	3.62	3.69	2.16	4.03	4.38	6.60	6.70	1.32	2.07	6.03
13	I1_SR1	SilentIntronRegion	0	67.68	7.82	5.25	8.23	66.11	11.21	17.84	13.08	15.38	4.15	1.70	2.59	8.07	2.98	1.70	11.20	10.80	3.34	5.86	5.21	2.21	2.24	5.07
14	I1_AR2	ActiveIntronRegion	0	67.67	4.46	2.17	10.83	78.74	12.01	14.83	7.29	10.63	2.57	0.95	4.13	10.05	4.54	2.87	6.62	7.47	3.42	4.67	6.43	1.09	3.23	7.62
15	I1_AR3	ActiveIntronRegion	0	50.23	6.65	1.58	13.68	54.80	13.97	14.54	7.08	6.39	3.90	0.00	3.00	7.67	1.59	1.28	2.11	5.90	0.00	6.25	2.33	0.00	0.16	6.27
16	I1_SR2	SilentIntronRegion	0	87.67	5.20	7.80	18.55	96.79	17.37	20.61	19.69	12.83	7.09	1.77	3.52	10.76	4.23	3.38	11.89	7.44	5.11	7.19	5.85	1.32	3.53	11.10
17	I1_AR4	ActiveIntronRegion	0	76.49	5.91	6.28	10.94	103.57	13.25	18.38	10.45	8.03	4.07	2.15	0.45	3.82	1.64	1.79	4.87	4.14	4.87	5.12	3.81	1.63	0.95	5.91
18	I1_AR5	ActiveIntronRegion	0	147.99	0.00	6.79	13.84	219.21	17.91	43.69	17.15	8.93	1.06	3.27	4.66	9.38	2.25	2.90	9.83	13.20	4.12	12.25	2.45	0.68	4.81	6.10
19	I1_AR6	ActiveIntronRegion	0	132.16	1.13	5.17	13.17	200.09	12.84	43.40	13.83	8.65	0.00	1.93	8.66	9.38	1.26	1.61	8.59	11.74	3.70	1.06	4.26	2.20	2.32	0.00
20	I1_AR7	ActiveIntronRegion	0	112.83	5.57	4.67	8.86	137.80	4.89	24.68	7.82	4.76	0.00	2.58	4.12	6.25	2.86	1.45	2.19	7.78	1.45	3.11	2.53	1.89	0.69	2.66
21	I1_SR3	SilentIntronRegion	0	181.82	9.57	10.07	23.42	119.29	18.85	27.52	20.67	17.88	5.87	1.59	1.89	2.77	3.04	5.93	10.47	8.52	7.06	7.52	6.42	3.01	3.53	6.16
22	I1_AR8	ActiveIntronRegion	0	108.50	4.40	10.89	23.32	78.49	9.95	21.24	18.66	16.34	5.05	1.62	0.66	4.11	1.35	6.04	5.73	13.37	6.91	4.18	8.62	2.05	2.94	6.70
23	I1_SR4	SilentIntronRegion	0	238.69	15.55	11.27	30.31	192.45	17.96	36.70	26.58	19.42	7.30	2.56	4.27	9.03	3.51	4.94	9.25	9.51	3.21	4.94	5.86	1.30	3.95	6.32
24	I1_AR9	ActiveIntronRegion	0	531.97	16.66	9.64	26.20	150.97	15.56	36.40	26.83	28.19	9.62	3.72	7.19	20.64	3.70	3.43	12.54	11.04	5.29	4.42	3.97	0.91	6.40	5.28
25	Ix	Intron	0	168.59	7.20	10.12	21.12	86.76	13.49	20.98	27.02	18.39	7.61	3.34	1.90	12.20	4.43	4.82	18.36	9.74	5.67	8.68	4.83	2.60	4.92	8.27
26	Ix_AR2	ActiveIntronRegion	0	177.18	7.87	9.77	20.70	74.73	12.20	20.04	25.90	15.89	7.10	1.56	2.77	8.04	4.99	4.24	17.74	9.88	5.46	9.70	4.31	2.82	4.94	8.70
27	Ix_SR1	SilentIntronRegion	0	185.91	6.52	12.43	26.13	108.46	15.43	24.80	32.92	25.42	10.12	6.36	0.49	18.48	3.72	6.73	22.42	11.58	6.63	9.19	6.29	2.35	5.43	8.44
28	Ix_AR1	ActiveIntronRegion	0	66.25	5.81	4.65	7.44	84.87	14.65	14.12	14.42	9.72	2.30	3.49	1.61	15.27	3.71	1.90	8.84	3.15	3.88	1.44	3.09	2.22	3.21	5.43
29	I1	Intron	0	117.42	6.09	6.53	17.40	87.94	14.10	23.57	15.92	12.94	5.24	2.52	1.97	5.46	3.68	5.79	9.81	8.86	4.71	5.74	5.85	2.20	3.31	6.18
30	I1_AR1	ActiveIntronRegion	0	30.03	3.69	0.20	0.63	36.71	5.29	13.95	7.48	7.21	2.00	1.30	0.00	4.47	3.51	3.04	7.19	3.07	2.71	0.00	4.16	0.56	2.91	3.21
31	I1_SR1	SilentIntronRegion	0	118.17	6.12	6.58	17.55	88.38	14.17	23.66	15.99	12.99	5.27	2.53	1.98	5.47	3.68	5.81	9.83	8.91	4.73	5.79	5.87	2.21	3.31	6.21
32	I1	Intron	0	102.96	4.04	3.64	11.41	69.45	7.47	18.67	9.34	8.29	2.63	0.83	1.88	4.87	1.44	2.32	5.12	4.87	1.64	2.38	1.94	1.10	2.14	3.57
33	I1_SR1	SilentIntronRegion	0	119.39	11.47	6.58	23.00	274.33	15.59	47.06	11.28	5.21	1.32	0.50	2.76	6.18	2.44	3.17	9.19	7.65	1.42	0.82	2.19	0.57	1.07	4.54
34	I1_AR1	ActiveIntronRegion	0	61.83	2.65	5.46	12.42	51.79	6.83	11.75	15.14	9.43	3.18	1.32	2.10	6.95	1.26	3.10	6.03	4.86	2.72	1.25	4.32	1.81	1.27	6.97
35	I1_SR2	SilentIntronRegion	0	186.58	4.79	3.73	12.98	92.03	11.18	28.47	10.98	8.78	2.68	0.75	2.91	7.37	2.15	4.24	8.56	5.84	2.48	3.11	4.35	1.18	3.08	6.01
36	I1_AR2	ActiveIntronRegion	0	162.17	6.06	6.02	13.71	71.87	10.32	27.58	12.59	12.23	4.38	1.40	1.46	4.27	2.44	3.71	7.44	6.71	3.05	3.83	3.33	2.02	2.37	4.54
37	I1_SR3	SilentIntronRegion	0	147.43	5.46	5.08	16.86	99.89	9.83	23.64	14.35	12.28	3.77	1.25	2.73	7.60	2.03	3.48	6.94	7.09	2.61	2.90	3.07	1.48	2.83	4.39
38	I1_SR4	SilentIntronRegion	0	101.95	1.15	1.03	9.15	60.62	4.16	17.98	4.30	5.21	0.94	0.00	0.00	2.19	2.44	3.48	5.05	5.61	0.00	3.61	1.21	1.25	0.00	8.26
39	I1_AR3	ActiveIntronRegion	0	252.18	4.09	4.07	15.09	57.30	2.47	14.51	12.03	5.06	3.32	0.32	0.00	2.58	0.85	2.65	5.34	7.51	2.01	2.13	1.07	1.16	1.05	5.42
40	I1_AR4	ActiveIntronRegion	0	55.03	4.07	4.29	5.45	43.26	3.67	8.39	5.19	1.44	5.73	0.00	0.00	0.00	4.87	3.87	5.94	3.30	1.85	0.00	0.00	2.20	0.00	0.00
41	I1_SR5	SilentIntronRegion	0	55.00	3.97	3.07	7.48	39.78	5.43	6.84	4.07	4.62	2.74	0.39	0.00	0.78	0.92	1.40	2.98	2.17	0.12	1.28	0.86	0.76	0.00	0.59
42	I1_AR5	ActiveIntronRegion	0	41.41	2.68	3.29	5.73	50.09	3.51	13.43	7.45	2.62	2.73	0.29	0.55	2.28	1.03	2.32	5.22	5.42	0.57	3.65	0.31	0.00	2.06	2.66
43	I1_SR6	SilentIntronRegion	0	62.51	2.73	2.54	10.10	56.26	4.66	14.89	5.17	5.50	2.20	1.06	1.92	4.27	0.70	1.28	3.50	3.06	0.77	2.29	0.76	0.72	1.90	3.28
44	I1_SR7	SilentIntronRegion	0	76.80	4.46	0.00	13.74	60.30	10.44	28.37	5.38	5.82	0.00	0.00	2.07	7.67	0.00	1.19	12.26	0.45	0.88	1.85	0.00	0.00	0.00	3.84
45	I1_AR7	ActiveIntronRegion	0	55.23	3.66	3.83	14.08	57.25	8.08	21.46	7.21	6.00	1.79	0.00	1.07	4.02	1.64	0.72	12.50	3.19	0.11	0.00	0.00	0.00	1.46	1.55
46	I1_SR8	SilentIntronRegion	0	82.47	4.10	1.77	10.02	82.62	12.24	32.06	8.54	8.00	2.19	0.28	4.71	2.96	1.30	0.42	3.61	2.99	0.00	1.01	3.11	0.12	2.50	3.04
47	I1_AR8	ActiveIntronRegion	0	68.94	2.43	1.70	5.29	43.11	7.60	16.98	4.39	4.25	0.61	0.81	1.02	4.23	1.11	0.74	2.16	5.03	0.77	1.97	1.32	0.87	1.70	2.48
48	I1_SR9	SilentIntronRegion	0	69.08	3.31	3.03	7.69	48.55	5.87	14.86	6.30	6.64	2.04	0.49	1.30	3.19	1.16	1.50	3.67	3.72	1.02	2.14	1.02	1.06	1.77	2.69
49	I1_SR10	SilentIntronRegion	0	52.31	2.66	2.22	6.13	31.23	4.48	8.79	6.09	6.01	1.61	0.55	0.81	1.31	0.70	1.28	2.26	1.94	1.25	1.63	0.36	0.81	1.46	1.75
50	ER2a	ExonRegion	0	22.73	8.73	19.89	4.76	7.53	26.30	7.54	17.00	13.19	22.50	81.27	18.74	7.58	124.00	83.82	81.93	81.71	37.37	12.75	35.10	50.21	26.90	28.60
51	E2a_E4a	KnownJunction	1	82.98	39.80	68.30	12.99	16.21	80.18	17.89	55.66	41.72	81.26	224.74	87.48	12.82	250.40	228.82	150.13	223.09	87.76	26.17	76.06	127.08	50.03	58.13
52	E2a_E5a	KnownJunction	0	0.00	0.00	1.83	1.50	0.00	0.00	6.54	3.98	0.00	3.73	5.11	0.00	0.00	4.77	0.00	7.60	8.32	2.24	0.00	2.68	3.03	8.82	3.59
53	ER3a	ExonRegion	0	6.67	0.69	0.82	1.59	6.90	1.41	0.89	1.76	1.24	2.08	3.08	0.40	0.00	4.22	3.83	4.33	5.23	1.26	0.00	0.48	0.49	0.93	0.66
54	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.26	2.16	0.00	0.00	2.47	0.00	0.00	0.00	0.00	0.00	0.00	2.47	0.00	0.00
55	ER4a	ExonRegion	0	66.89	28.25	104.67	39.45	106.26	98.89	42.23	89.72	79.65	104.00	262.90	85.99	60.54	498.75	269.32	302.25	307.23	148.09	64.52	113.51	167.50	125.83	96.41
56	E4a_E5a	KnownJunction	0	98.31	50.12	120.19	72.32	42.95	38.84	16.08	102.89	96.96	131.68	266.07	87.03	111.36	750.84	334.76	291.38	398.32	157.23	52.99	133.46	195.40	148.55	133.59
57	ER5a	ExonRegion	0	275.84	46.10	123.39	63.13	193.51	175.59	53.65	141.09	126.11	130.68	346.11	113.13	96.32	598.19	258.81	391.80	414.72	168.84	74.26	109.56	191.71	154.08	114.33
58	E5_Da	NovelBoundary	0	104.83	5.00	2.84	0.00	15.62	10.05	2.03	19.14	1.16	3.47	11.11	6.00	0.00	7.71	0.00	11.19	12.81	0.00	0.00	0.00	0.00	3.12	0.00
59	E5a_E6a	KnownJunction	0	944.02	89.13	151.68	97.99	946.94	550.88	157.35	165.94	135.42	156.18	545.88	194.76	182.78	910.12	505.10	734.34	488.45	204.78	89.32	142.09	258.35	238.08	199.41
60	E5a_E7a	NovelJunction	0	0.00	0.00	11.09	7.46	0.00	0.00	6.32	4.76	2.95	2.69	6.90	0.00	0.00	12.30	4.45	12.56	16.55	19.77	3.76	5.56	0.00	6.25	4.10
61	I5	Intron	0	74.26	2.45	4.84	4.90	28.39	7.52	8.14	13.04	10.21	3.71	10.49	4.48	1.90	14.07	7.80	16.48	13.53	3.99	3.46	2.57	3.71	3.52	2.48
62	I5_AR1	ActiveIntronRegion	0	86.80	2.76	4.68	5.57	30.51	8.48	9.54	14.98	11.21	4.17	11.56	5.65	2.40	15.50	8.92	20.11	15.77	4.69	4.38	3.24	4.09	3.76	3.06
63	E6_Aa	NovelBoundary	0	257.16	0.00	14.90	6.56	78.01	10.90	43.10	27.89	19.36	14.05	20.22	0.00	0.00	15.13	23.12	20.17	32.63	8.87	8.19	3.26	5.50	3.12	0.00
64	ER6a	ExonRegion	0	241.13	39.34	117.11	62.94	174.53	159.45	56.54	121.35	108.33	115.30	276.02	114.62	104.31	562.89	261.58	360.86	307.39	159.42	50.04	84.44	163.38	132.66	104.93
65	E6a_E7a	KnownJunction	0	292.64	27.89	125.51	52.07	118.76	92.33	16.56	127.45	107.58	93.80	247.69	60.77	80.84	444.29	187.53	389.04	245.25	162.54	41.60	79.07	161.98	90.07	92.02
66	I6	Intron	0	65.34	2.07	4.54	5.51	29.96	10.37	7.04	6.12	9.37	8.70	8.96	2.42	0.00	19.09	14.94	29.24	13.44	5.92	2.52	4.57	3.98	3.06	1.00
67	I6_AR1	ActiveIntronRegion	0	65.63	2.08	4.56	5.54	30.08	10.41	7.07	6.14	9.41	8.74	9.00	2.43	0.00	19.17	15.00	29.37	13.50	5.95	2.53	4.59	4.00	3.08	0.99
68	E7_Aa	NovelBoundary	0	89.94	0.00	8.19	3.16	10.70	4.32	4.37	18.36	12.47	8.33	2.05	0.00	0.00	14.83	26.08	35.63	8.88	1.58	4.05	5.69	2.90	5.94	0.00
69	ER7a	ExonRegion	0	342.41	52.21	101.05	61.72	250.29	121.61	76.31	125.74	97.37	92.17	204.23	68.00	31.37	424.90	215.25	280.27	215.08	88.89	61.00	75.01	104.52	140.24	96.29
70	ER7b	ExonRegion	0	41.46	3.14	3.68	1.49	20.19	7.67	9.03	7.31	1.74	4.95	5.27	0.00	1.07	26.58	11.34	6.75	8.10	1.18	0.00	2.51	1.80	5.30	0.00
71	ER7c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.83	0.00	0.00	1.24	0.00	1.93	0.00	0.00	1.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
72	IG5	Intergenic	0	7.62	23.84	20.84	16.71	28.61	25.64	16.74	10.60	5.49	17.93	24.45	8.75	5.30	28.95	18.74	18.95	21.72	21.92	27.84	18.16	7.93	9.00	11.17
73	IG5_SR2	SilentIntergenicRegion	0	3.27	3.93	2.82	2.35	8.27	22.67	4.09	1.00	0.00	5.28	8.96	2.76	3.09	9.34	11.87	11.48	12.75	8.89	11.08	0.82	1.70	2.41	6.81
74	IG5_SR1	SilentIntergenicRegion	0	4.41	26.35	10.26	7.10	26.20	31.94	11.03	7.99	1.54	9.46	12.00	5.05	6.25	37.69	15.11	9.66	20.08	11.63	11.15	10.90	3.49	9.55	10.16
75	IG5_AR1	ActiveIntergenicRegion	0	9.53	38.09	35.73	28.70	45.35	32.93	27.33	18.14	9.87	29.29	38.79	14.17	7.62	44.43	27.07	28.13	31.03	34.63	44.41	30.55	13.32	14.39	16.16