Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BAG2 Gene 0 41.39 23.07 21.28 15.11 31.18 33.92 26.48 19.63 16.55 23.58 162.70 213.31 161.41 150.97 128.82 106.27 85.11 8.27 17.94 17.26 167.56 262.21 84.52 2 370693 Transcript 0 29.04 19.30 16.49 13.12 28.93 21.07 19.04 17.94 15.80 21.00 191.88 136.23 101.16 185.66 137.12 173.68 107.14 13.23 31.78 21.51 267.04 259.52 138.53 3 438730 Transcript 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 0.00 1.56 0.00 2.42 0.00 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 4 447026 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 1 2.60 1.40 0.77 0.63 2.12 7.67 4.24 2.15 1.29 2.91 36.46 1.18 1.63 46.04 30.18 34.89 21.15 2.31 3.19 1.25 82.68 48.19 34.40 6 E1_Ab KnownBoundary 1 41.04 6.38 5.47 5.79 36.42 106.08 48.05 10.19 2.26 15.88 167.78 6.00 0.00 170.76 126.58 192.77 98.74 4.52 13.46 6.07 264.53 136.86 159.89 7 ER1b ExonRegion 1 24.52 5.29 5.90 5.60 24.03 54.64 17.73 6.96 10.44 14.85 127.89 22.33 11.38 161.45 94.16 137.27 97.16 9.26 19.82 16.13 254.71 117.58 92.56 8 E1a_E3a KnownJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 0.00 1.56 0.00 2.42 0.00 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 9 E1a_E4a KnownJunction 1 17.41 3.35 14.49 2.96 19.02 0.00 0.00 8.67 4.34 11.36 161.09 31.96 12.99 163.17 111.26 127.49 87.14 16.79 30.12 12.14 299.00 244.20 119.51 10 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER3a ExonRegion 0 0.58 2.15 1.93 1.30 5.88 1.45 2.87 2.72 4.83 2.23 6.91 14.13 6.34 8.35 1.10 5.51 3.88 0.66 2.53 5.66 25.09 9.64 8.11 12 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 6.79 0.00 1.77 0.00 1.62 0.00 1.95 0.00 0.00 4.65 0.00 0.00 4.77 0.00 0.00 0.00 2.72 11.08 11.35 13 E4_Aa NovelBoundary 0 20.67 17.50 13.04 1.70 0.00 2.90 14.93 1.73 2.95 7.28 2.68 12.00 0.00 2.47 0.00 0.00 4.68 0.00 4.05 5.88 22.55 10.65 18.95 14 ER4a ExonRegion 1 27.32 18.30 22.19 15.42 24.40 7.07 15.23 18.17 24.07 28.49 278.59 76.56 34.43 228.42 121.78 180.56 192.89 18.11 32.69 25.64 449.70 296.79 161.55 15 E4_Da KnownBoundary 1 31.56 38.55 22.83 21.04 36.84 28.79 41.51 24.93 26.13 46.52 300.92 162.05 52.76 231.68 201.99 231.31 169.33 25.95 35.86 59.51 498.36 283.45 194.63 16 E4a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER4b ExonRegion 1 22.04 28.11 16.83 15.83 31.95 22.17 27.06 21.30 20.20 31.94 263.44 125.30 64.01 245.43 196.52 225.01 153.10 20.00 43.19 41.30 402.83 269.39 196.41 18 E4_Db NovelBoundary 0 17.11 27.50 5.29 3.90 4.33 0.00 10.78 8.09 3.24 3.01 0.00 0.00 0.00 4.83 22.25 16.15 4.21 0.00 31.91 2.88 11.86 14.14 16.05 19 E4b_E5a KnownJunction 0 28.15 26.18 15.26 15.72 37.52 28.11 24.73 23.78 20.14 21.68 222.32 134.59 113.30 243.81 138.95 268.56 141.84 14.47 51.48 27.10 331.44 290.74 209.14 20 E5_Ab NovelBoundary 0 37.41 13.81 18.83 23.91 26.06 18.17 20.98 7.27 25.52 21.19 217.69 147.95 107.30 186.42 123.25 210.20 106.97 12.06 16.57 13.93 291.34 296.49 109.95 21 ER5a ExonRegion 0 32.15 18.11 17.27 19.28 34.40 22.53 18.41 19.18 26.29 22.45 266.92 149.06 119.04 229.46 151.56 269.61 145.55 17.51 43.08 23.91 355.22 304.99 180.81 22 ER5b ExonRegion 0 40.02 26.83 29.94 19.85 40.12 62.45 41.47 20.03 28.42 31.75 319.45 267.08 171.87 268.61 160.44 207.05 174.68 18.72 38.39 24.78 400.31 363.63 159.88 23 E5_Da KnownBoundary 0 19.78 13.68 8.96 9.72 3.99 20.50 10.07 20.41 10.42 10.99 129.98 55.37 34.58 44.32 26.33 37.94 41.42 14.01 4.14 8.37 141.84 112.55 53.01 24 E5_Db KnownBoundary 0 22.74 2.57 23.62 7.13 11.88 2.67 25.53 12.36 8.68 21.73 82.86 55.97 32.79 41.03 14.46 61.01 53.58 1.95 13.37 6.14 109.04 122.04 19.04 25 ER5c ExonRegion 0 48.68 24.40 37.99 23.17 32.11 22.01 37.07 29.38 25.94 36.70 291.87 290.07 225.12 238.75 162.47 109.97 148.54 12.93 19.11 12.77 308.52 339.61 111.59 26 ER5d ExonRegion 0 71.89 38.68 34.32 24.27 48.58 45.94 39.82 32.53 22.55 35.64 201.03 375.31 295.99 186.02 194.28 116.51 94.04 8.32 19.65 23.34 131.05 399.61 90.90 27 IG48 Intergenic 0 8.90 9.52 10.07 9.06 12.01 12.34 9.16 11.21 8.55 10.69 6.82 17.59 9.07 6.81 5.60 7.26 5.20 2.55 4.07 8.92 20.17 85.22 27.16 28 IG48_SR1 SilentIntergenicRegion 0 1.96 2.94 2.89 2.93 8.03 4.41 5.32 2.25 3.97 2.73 7.06 25.63 9.89 6.51 3.49 4.21 2.60 0.44 0.77 3.03 8.33 60.83 13.67 29 IG48_AR2 ActiveIntergenicRegion 0 4.36 3.92 3.24 2.69 7.18 4.31 3.30 4.72 4.33 2.20 6.04 18.17 9.23 9.09 7.74 8.44 4.92 0.78 2.30 4.11 33.10 45.04 24.90 30 IG48_SR2 SilentIntergenicRegion 0 1.44 1.98 3.13 3.63 2.53 3.48 4.30 1.27 4.16 4.09 2.09 8.82 7.87 5.90 4.96 5.50 2.23 1.12 1.06 2.16 4.31 42.62 17.07 31 IG48_AR3 ActiveIntergenicRegion 0 13.60 14.70 15.79 14.09 16.97 19.16 13.57 17.64 12.16 17.23 8.27 18.46 9.27 6.05 5.04 7.53 6.35 3.99 5.99 13.46 19.07 117.49 32.37