Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP1-34B21.1 Gene 0 11.50 59.90 19.50 17.04 26.28 31.99 20.95 7.12 7.72 11.08 3.87 2.45 3.39 5.18 7.35 5.10 3.78 13.49 18.22 24.95 7.77 9.33 6.44 2 407855 Transcript 0 6.40 31.41 9.72 8.96 13.78 16.70 10.97 3.48 3.93 5.34 1.80 1.23 2.14 2.47 3.46 2.67 1.72 6.13 9.10 12.16 3.44 4.78 3.19 3 IG29 Intergenic 0 27.58 210.08 65.59 64.92 56.15 98.21 61.98 31.80 36.65 63.56 20.37 21.75 20.92 17.12 15.83 11.32 18.85 58.89 86.65 81.10 26.99 33.35 26.53 4 IG29_AR1 ActiveIntergenicRegion 0 27.63 210.48 65.72 65.04 56.25 98.39 62.10 31.86 36.72 63.68 20.41 21.79 20.96 17.15 15.86 11.34 18.89 59.00 86.81 81.25 27.05 33.42 26.58 5 ER1a ExonRegion 0 4.84 33.87 19.96 10.17 15.19 34.83 14.98 9.41 7.37 15.11 6.93 2.56 2.51 8.21 12.03 4.85 8.58 27.34 19.78 31.18 17.25 8.84 8.68 6 E1_Da NovelBoundary 0 14.22 41.37 56.12 21.58 31.32 91.48 40.76 20.21 11.02 32.21 14.69 0.00 0.00 14.54 14.09 4.36 17.30 60.77 13.84 40.20 28.79 13.96 10.84 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 I1 Intron 0 28.94 135.88 80.52 61.25 50.03 96.96 46.58 31.76 26.16 47.08 17.10 12.09 11.96 17.04 22.13 15.74 13.28 71.90 81.55 63.74 27.60 26.39 27.95 9 I1_AR1 ActiveIntronRegion 0 29.01 136.23 80.73 61.41 50.16 97.22 46.71 31.84 26.23 47.20 17.14 12.12 11.99 17.08 22.19 15.78 13.31 72.09 81.76 63.91 27.68 26.46 28.02 10 E2_Aa NovelBoundary 0 38.67 218.58 184.94 157.69 121.82 131.40 95.30 76.64 55.18 79.86 27.43 6.30 6.49 21.54 26.82 24.78 7.67 77.43 73.04 101.56 22.92 50.82 20.83 11 ER2a ExonRegion 0 37.94 221.35 59.37 55.24 83.84 81.42 60.42 15.79 26.41 26.38 7.47 3.46 4.15 8.92 16.47 15.85 3.21 25.08 52.18 63.77 8.46 33.26 18.40 12 E2_Da NovelBoundary 0 67.72 272.85 142.84 143.31 70.63 64.57 86.29 59.89 48.93 63.42 9.58 0.00 7.47 9.30 17.80 11.71 13.74 50.95 86.50 94.73 15.07 33.92 23.30 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 I2 Intron 0 11.03 47.28 21.33 20.49 14.82 21.21 17.20 11.44 10.90 14.34 3.92 5.34 3.69 3.30 3.62 4.56 3.44 6.96 19.21 18.90 3.86 8.23 3.22 15 I2_AR1 ActiveIntronRegion 0 31.05 128.16 60.50 52.77 34.12 42.96 25.78 29.89 24.75 37.31 10.47 9.79 4.87 7.02 9.90 10.37 8.65 18.62 43.95 44.94 8.84 23.67 8.72 16 E3_Aa NovelBoundary 0 10.59 14.41 3.49 22.14 23.77 18.74 29.06 2.30 7.73 8.00 2.68 0.00 6.82 0.00 4.82 0.00 0.00 0.00 16.85 18.02 0.00 2.39 0.00 17 ER3a ExonRegion 0 0.16 2.03 1.07 1.57 0.69 2.02 0.44 0.44 0.32 0.03 0.00 0.00 4.57 0.21 0.07 0.00 0.00 0.24 0.65 0.71 0.00 0.21 0.00 18 E3_Da NovelBoundary 0 6.59 30.13 0.00 27.10 12.90 13.97 16.25 4.39 13.92 7.71 0.00 7.65 21.59 0.00 0.00 3.50 0.00 0.00 9.51 9.46 0.00 5.82 0.00 19 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E3a_E5a NovelJunction 0 3.11 9.21 0.00 1.93 25.81 21.81 15.06 4.60 1.50 5.29 0.00 0.00 0.00 6.77 0.00 3.50 4.77 0.00 0.00 0.00 0.00 0.00 0.00 21 I3 Intron 0 5.38 21.18 5.69 13.66 16.24 11.43 13.35 10.35 1.51 4.62 0.32 2.76 2.85 1.25 1.81 1.95 0.27 2.03 3.66 7.68 2.35 0.68 0.24 22 I3_SR1 SilentIntronRegion 0 5.40 21.24 5.71 13.70 16.30 11.46 13.40 10.38 1.51 4.64 0.32 2.77 2.86 1.26 1.81 1.96 0.27 2.04 3.66 7.70 2.36 0.69 0.24 23 E4_Aa NovelBoundary 0 0.00 33.15 7.04 15.15 24.79 22.32 26.98 3.98 1.71 2.50 0.00 6.30 6.82 0.00 4.45 0.00 0.00 4.39 13.93 9.46 0.00 3.00 0.00 24 ER4a ExonRegion 0 1.57 20.69 7.11 7.95 12.17 7.34 8.07 2.74 1.30 3.68 0.68 1.68 1.50 1.84 1.45 0.00 0.07 1.04 5.64 9.00 1.68 0.74 0.00 25 E4_Da NovelBoundary 0 0.00 31.11 4.52 23.87 4.16 13.46 12.59 4.27 3.24 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 1.91 3.48 6.07 0.00 5.63 4.35 26 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER5a ExonRegion 0 13.08 4.77 0.00 5.69 12.13 21.82 14.81 2.92 0.00 2.82 1.10 3.37 6.57 3.03 1.16 3.37 3.63 1.46 3.61 4.82 3.53 0.00 1.66 28 IG30 Intergenic 0 13.36 6.21 6.25 10.06 20.09 23.08 18.64 9.14 6.15 6.28 1.36 3.33 6.35 4.48 1.79 3.68 2.32 0.84 4.47 3.95 0.91 2.06 1.46 29 IG30_AR1 ActiveIntergenicRegion 0 7.70 4.79 4.29 9.54 14.19 16.53 14.76 6.63 5.86 4.79 1.90 1.41 3.64 3.61 2.35 2.71 2.75 0.84 4.34 4.68 1.34 1.74 1.34 30 IG30_AR2 ActiveIntergenicRegion 0 20.20 7.95 8.63 10.71 27.24 31.00 23.35 12.18 6.53 8.08 0.70 5.65 9.63 5.54 1.12 4.86 1.80 0.84 4.63 3.09 0.40 2.46 1.60