Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HLA-DQB2 Gene 0 65.39 0.91 1.77 6.17 29.80 13.71 16.53 3.27 1.33 0.81 133.40 19.86 74.20 75.26 55.21 102.56 75.83 0.18 0.71 1.33 0.61 0.57 1.32 2 429950 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 454742 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 437316 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 435145 Transcript 0 3.32 2.29 0.57 0.38 1.84 1.28 4.49 1.33 0.23 0.43 0.85 4.93 6.95 3.70 5.67 2.79 1.66 0.46 1.79 3.33 1.52 0.78 2.94 6 411527 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 427449 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ER1a ExonRegion 0 1.80 0.00 0.00 0.00 0.00 0.00 5.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 0 4.23 0.00 0.00 0.00 0.00 0.00 15.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1c ExonRegion 0 10.68 0.00 0.00 0.00 0.00 10.70 48.23 2.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1_Ad KnownBoundary 0 34.01 0.00 0.00 0.00 0.00 25.61 86.96 5.09 1.33 0.00 0.00 0.00 0.00 0.00 6.06 4.19 9.54 0.00 0.00 0.00 0.00 0.00 0.00 12 E1_Ae KnownBoundary 0 10.45 0.00 0.00 0.00 4.33 2.44 35.24 0.00 0.00 1.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER1d ExonRegion 0 14.46 0.00 0.00 0.00 2.45 13.07 59.30 3.46 0.00 0.96 0.00 0.00 0.00 0.00 0.00 2.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER1e ExonRegion 0 1.82 0.00 0.00 0.00 0.84 1.87 10.04 1.05 1.85 0.70 0.00 3.95 2.14 0.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E1a_E2a KnownJunction 0 3.56 0.00 0.00 0.00 0.00 0.00 0.00 1.97 1.30 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER2a ExonRegion 0 47.80 0.00 0.33 1.94 4.75 5.80 24.96 2.01 0.82 1.76 41.40 5.89 27.28 27.14 19.18 30.06 26.37 0.00 0.00 0.00 0.00 0.00 0.31 17 E2a_E3a KnownJunction 0 1900.11 0.00 20.34 88.13 136.76 89.27 64.17 2.30 3.79 1.61 1199.67 96.03 528.86 485.73 299.03 823.63 721.27 0.00 0.00 0.00 0.00 0.00 4.35 18 E3_Aa NovelBoundary 0 49.05 0.00 0.00 1.56 7.98 0.00 4.50 0.00 0.00 0.00 41.59 6.30 34.09 0.00 0.00 41.10 48.81 0.00 0.00 0.00 0.00 0.00 0.00 19 ER3a ExonRegion 0 317.46 0.00 3.88 19.30 67.43 33.72 31.00 7.80 3.62 0.81 483.65 69.39 235.92 275.44 182.41 326.62 269.82 0.00 0.00 0.00 0.00 0.75 0.77 20 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E3a_E5a KnownJunction 0 0.00 0.00 0.00 1.43 0.00 11.13 1.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E3a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER4a ExonRegion 0 231.52 0.00 11.96 55.67 350.86 117.83 47.27 5.90 2.68 1.64 1125.50 135.38 646.13 584.87 459.57 965.89 637.31 0.00 0.00 0.00 0.00 2.87 0.00 24 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 14.99 19.34 1.93 1.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E5_Aa NovelBoundary 0 11.04 0.00 0.00 8.46 25.47 10.45 8.79 18.32 14.03 2.93 8.05 0.00 0.00 11.83 5.56 63.91 35.34 0.00 0.00 0.00 0.00 0.00 0.00 26 ER5a ExonRegion 0 0.00 0.00 0.05 1.48 0.00 18.34 18.54 3.60 2.37 2.82 0.16 4.15 12.70 25.04 14.99 0.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER5b ExonRegion 0 3.32 2.29 0.57 0.38 1.84 1.28 4.49 1.33 0.23 0.43 0.85 4.93 6.95 3.70 5.67 2.79 1.66 0.46 1.79 3.33 1.52 0.78 2.94 28 E5_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 8.61 1.81 0.00 0.00 5.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER5c ExonRegion 0 6.92 0.00 0.00 1.90 1.58 1.29 16.16 7.07 4.20 2.34 0.00 0.11 0.00 1.46 0.48 1.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 E5_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 10.47 3.20 5.99 0.00 0.00 0.00 0.00 0.00 0.00 3.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER5d ExonRegion 0 5.58 0.00 2.25 0.00 0.05 4.84 11.32 4.47 1.52 0.30 0.00 0.00 0.68 1.61 1.43 0.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00