Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C6orf26 Gene 0 23.13 9.11 22.59 10.10 13.15 9.81 13.44 11.69 4.20 11.76 6.37 4.46 7.98 17.83 22.03 24.92 17.27 25.84 6.54 9.78 4.46 3.49 4.50 2 476085 Transcript 0 10.13 9.31 13.99 3.81 3.39 4.66 8.12 5.33 2.75 5.80 2.00 1.35 3.93 8.14 9.06 3.84 2.57 6.36 2.46 4.18 1.46 0.84 1.26 3 433778 Transcript 0 0.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 425424 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 415669 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 494299 Transcript 0 49.88 14.34 52.41 25.80 37.69 23.92 32.26 27.23 9.95 27.98 19.36 13.67 21.72 47.20 58.61 71.63 50.59 73.03 19.36 26.91 12.54 8.98 11.50 7 ER1a ExonRegion 0 0.00 0.59 0.73 0.00 0.00 0.62 0.26 0.24 1.57 1.88 0.00 0.89 0.78 0.79 0.69 0.91 0.00 0.00 3.49 0.08 0.69 0.49 0.00 8 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E2_Aa NovelBoundary 0 41.71 28.15 52.69 12.15 57.72 91.25 50.12 36.76 14.06 44.56 23.06 26.86 35.06 71.58 34.49 53.40 74.43 63.13 31.25 43.46 14.09 5.39 11.69 10 ER2a ExonRegion 0 0.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E2_Ab KnownBoundary 0 20.60 8.42 19.81 8.72 15.87 43.38 58.78 15.20 8.54 6.12 2.58 17.86 12.66 24.84 22.75 58.28 8.23 78.31 9.41 5.62 7.60 2.76 4.35 12 ER2b ExonRegion 0 5.66 0.60 0.57 0.00 0.64 0.19 1.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 Ix Intron 0 27.20 10.12 18.93 14.32 17.75 25.47 19.21 10.15 5.72 18.07 9.62 2.96 4.98 32.13 23.25 22.18 15.06 27.24 16.51 9.70 13.71 1.73 6.70 15 Ix_AR1 ActiveIntronRegion 0 27.43 10.20 19.08 14.43 17.90 25.67 19.37 10.22 5.77 18.21 9.70 2.98 5.02 32.39 23.44 22.35 15.17 27.46 16.62 9.78 13.82 1.74 6.75 16 ER3a ExonRegion 0 9.14 5.35 6.52 0.82 4.06 7.82 11.99 4.44 1.50 2.91 2.80 2.06 4.02 8.29 22.16 14.73 3.63 8.28 1.81 2.23 2.50 1.24 1.06 17 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 Ix_AR1 ActiveIntronRegion 0 10.45 3.28 0.00 0.00 4.40 3.02 8.71 0.00 0.00 0.00 6.36 2.93 3.18 10.77 17.03 14.62 13.58 0.00 2.62 1.75 3.63 0.00 2.42 19 E4_Aa NovelBoundary 0 40.16 22.43 51.18 25.67 48.98 12.15 38.38 24.27 21.15 36.13 15.79 12.60 0.00 37.67 62.67 87.50 30.95 64.34 17.79 12.21 5.99 3.12 26.89 20 ER4a ExonRegion 0 49.88 14.34 52.41 25.80 37.69 23.92 32.26 27.23 9.95 27.98 19.36 13.67 21.72 47.20 58.61 71.63 50.59 73.03 19.36 26.91 12.54 8.98 11.50 21 E4_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER4b ExonRegion 0 35.76 14.24 58.80 25.01 15.83 18.88 21.00 28.55 10.22 37.85 10.64 10.12 15.16 49.60 47.67 66.20 42.81 58.45 11.40 20.69 7.91 11.43 10.32 23 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E4a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E4a_E5c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER5a ExonRegion 0 26.21 11.72 44.55 19.44 19.67 11.70 20.17 36.15 9.05 29.62 12.00 1.27 15.31 25.89 31.91 45.54 30.87 53.53 11.15 21.28 7.58 7.78 20.73 27 E5_Da KnownBoundary 0 46.01 16.44 61.68 31.30 22.58 16.18 25.22 45.30 10.82 28.47 10.06 0.00 19.64 25.66 38.45 30.42 36.84 47.05 4.52 21.09 5.31 7.10 13.15 28 ER5b ExonRegion 0 49.40 16.78 61.68 28.18 11.99 21.02 16.17 27.07 9.55 22.98 3.93 0.39 11.73 20.48 24.61 19.69 23.81 34.41 6.09 16.68 7.83 1.60 4.98 29 E5_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 E5b_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER5c ExonRegion 0 30.39 27.34 41.24 11.44 10.17 13.36 24.11 15.75 6.68 15.52 6.01 3.15 11.00 23.64 26.51 10.60 7.70 19.07 3.89 12.45 3.67 2.03 3.77 32 E5_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 E5_Ac KnownBoundary 0 14.00 33.28 11.32 7.72 23.01 12.32 12.37 6.12 1.59 5.43 0.00 0.00 0.00 2.24 9.52 0.00 9.44 7.50 4.61 9.08 0.00 4.65 16.99 34 ER5d ExonRegion 0 28.22 47.45 37.99 12.72 26.76 11.00 26.48 20.74 4.12 13.00 5.80 8.66 4.69 24.36 17.41 8.92 16.50 20.33 3.19 14.18 4.41 8.33 11.75 35 ER5e ExonRegion 0 16.33 9.05 3.48 1.58 4.92 2.36 4.40 2.60 0.52 1.13 0.21 0.19 0.57 1.10 0.94 0.15 0.80 2.48 0.24 0.69 0.20 0.74 0.90 36 ER5f ExonRegion 0 0.00 4.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00