Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	HLA-DPB1	Gene	0	1054.48	15.17	91.94	91.37	415.06	178.87	109.51	159.37	208.85	39.23	292.59	66.63	216.25	717.15	610.10	795.43	692.30	12.64	8.86	1.31	3.30	39.47	32.03
2	418931	Transcript	0	68.76	1.77	1.04	1.86	28.86	30.67	7.72	2.83	11.14	0.00	29.86	5.43	4.49	76.75	80.06	85.05	46.49	1.57	0.00	0.00	0.00	2.66	2.31
3	411942	Transcript	0	36.90	0.00	3.02	1.90	0.00	5.28	0.00	3.61	6.74	0.00	10.58	0.00	0.00	25.72	8.90	14.95	3.93	0.00	0.00	0.00	0.00	3.12	0.00
4	422592	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	469120	Transcript	0	6.35	1.02	2.45	0.00	2.68	3.51	0.33	0.86	3.09	1.43	2.90	6.13	7.04	25.58	11.36	8.42	8.25	1.85	0.00	0.00	0.00	1.04	3.18
6	471184	Transcript	0	67.60	2.55	10.70	7.70	73.80	5.85	5.40	7.86	12.23	1.48	17.08	5.62	27.77	60.96	32.58	34.09	19.51	2.15	0.31	0.00	0.00	6.43	3.07
7	488575	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	498038	Transcript	1	19.92	0.03	8.58	3.24	7.60	0.56	1.44	4.76	11.37	2.71	13.10	1.54	8.50	35.08	14.17	31.04	30.16	0.37	0.00	0.02	0.03	9.48	2.64
9	428835	Transcript	0	3.41	0.00	7.21	1.73	0.00	0.00	0.00	0.00	1.59	3.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.57	0.00	0.00	0.00	5.51	0.00
10	416804	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11	478189	Transcript	0	14.13	0.52	1.18	0.78	7.22	2.36	2.05	1.33	2.60	0.44	4.96	2.42	9.10	31.36	8.15	19.13	18.68	0.01	0.00	0.00	0.28	2.13	1.14
12	448578	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.02	0.00	0.00	0.10	0.00	0.00	0.00	0.00	0.00	0.00
13	ER1a	ExonRegion	0	68.76	1.77	1.04	1.86	28.86	30.67	7.72	2.83	11.14	0.00	29.86	5.43	4.49	76.75	80.06	85.05	46.49	1.57	0.00	0.00	0.00	2.66	2.31
14	E1_Ab	KnownBoundary	0	137.36	3.35	0.00	0.00	36.08	20.22	6.76	0.00	1.79	0.00	42.33	17.56	5.84	86.29	163.55	131.25	71.34	0.00	0.00	0.00	0.00	0.00	4.35
15	E1_Ac	KnownBoundary	0	148.40	3.35	3.61	5.93	87.69	77.51	15.50	7.56	29.95	1.61	46.12	10.95	18.67	241.57	152.05	118.60	89.11	5.06	0.00	0.00	0.00	12.06	4.35
16	ER1b	ExonRegion	1	284.77	4.07	4.57	6.81	122.35	118.20	29.25	16.03	36.49	1.88	97.35	9.45	11.09	404.70	271.40	359.90	183.95	3.70	0.00	0.00	0.00	12.12	7.48
17	E1_Ad	KnownBoundary	1	1706.23	2.57	10.67	20.78	1010.53	704.42	375.38	73.65	92.33	15.10	351.93	23.26	89.93	2287.61	776.44	1499.44	917.90	0.00	0.00	0.00	0.00	11.45	8.62
18	ER1c	ExonRegion	1	1092.67	4.67	9.62	22.56	685.09	499.61	231.01	54.67	78.32	8.03	294.95	10.90	45.51	1637.77	623.66	1172.45	741.97	3.70	0.00	0.00	0.00	14.97	10.12
19	ER1d	ExonRegion	0	1835.99	5.45	30.13	69.96	1020.75	766.19	362.15	172.17	222.74	30.27	520.55	150.37	527.07	1367.52	744.07	1496.82	1455.39	0.51	0.00	0.00	0.00	9.37	2.91
20	E1a_E2d	KnownJunction	1	499.42	3.16	41.07	44.35	84.72	63.09	24.42	127.21	273.87	21.19	340.72	5.70	87.49	757.14	555.91	322.91	904.81	0.00	0.00	0.00	0.00	5.51	4.35
21	ER2a	ExonRegion	0	27.66	12.10	10.33	1.10	3.23	3.54	1.35	0.06	0.83	2.19	4.87	3.14	4.37	14.65	0.05	26.03	11.10	1.18	2.20	0.40	0.04	12.90	13.01
22	E2_Ab	KnownBoundary	0	81.27	30.78	28.15	5.06	15.28	8.23	6.18	0.00	5.01	6.82	7.11	0.00	0.00	34.08	0.00	37.34	20.38	4.02	9.22	2.62	0.00	39.25	51.30
23	ER2b	ExonRegion	0	108.95	46.22	75.92	5.17	14.41	12.25	9.09	3.18	15.66	15.25	12.65	4.33	4.69	33.66	4.15	65.72	22.81	13.02	11.51	2.03	2.50	69.80	77.89
24	E2_Ac	KnownBoundary	0	132.69	44.27	113.48	7.66	10.53	16.01	8.39	7.56	23.00	17.65	12.42	5.85	0.00	29.31	5.19	67.67	26.74	14.22	7.15	0.00	2.35	60.01	72.39
25	ER2c	ExonRegion	0	101.91	30.03	126.66	13.45	10.13	15.45	4.87	3.97	32.06	19.74	16.20	0.64	4.89	29.37	12.78	83.60	19.52	19.42	3.80	2.13	6.33	84.67	78.16
26	E2_Da	KnownBoundary	0	24.82	0.00	11.32	7.03	0.00	0.00	2.25	2.55	12.07	3.14	7.42	0.00	16.56	19.37	23.86	30.42	25.81	2.20	0.00	0.00	0.00	5.39	0.00
27	E2a_E2d	KnownJunction	0	12.15	0.00	117.80	6.96	4.16	2.44	0.00	0.00	15.10	11.42	2.05	0.00	0.00	0.00	0.00	3.33	0.00	18.45	4.80	0.00	2.84	4.90	10.41
28	E2a_E2e	KnownJunction	0	3.41	0.00	7.21	1.73	0.00	0.00	0.00	0.00	1.59	3.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.57	0.00	0.00	0.00	5.51	0.00
29	ER2d	ExonRegion	0	19.92	0.03	8.58	3.24	7.60	0.56	1.44	4.76	11.37	2.71	13.10	1.54	8.50	35.08	14.17	31.04	30.16	0.37	0.00	0.02	0.03	9.48	2.64
30	E2_Ad	KnownBoundary	0	13.41	0.00	7.57	4.99	0.00	0.00	0.00	0.00	6.02	0.00	0.00	0.00	0.00	19.54	4.94	14.61	37.12	0.00	0.00	0.00	0.00	0.00	4.35
31	E2_Ae	KnownBoundary	1	272.49	7.17	34.62	15.05	56.20	49.97	6.71	35.53	92.04	4.94	202.16	24.31	27.27	506.45	311.76	224.56	692.19	8.95	0.00	0.00	0.00	37.54	39.52
32	ER2e	ExonRegion	1	403.76	2.03	146.40	63.33	77.75	54.37	15.97	109.40	286.69	26.99	370.09	30.56	93.25	1128.29	671.04	386.73	1170.26	18.15	0.00	0.13	1.94	31.87	34.03
33	ER2f	ExonRegion	0	425.77	14.57	165.75	114.92	210.59	207.30	142.72	219.16	371.77	67.22	439.51	58.75	145.58	1652.23	1223.39	1278.49	1050.60	24.70	8.99	0.88	4.93	69.32	47.60
34	E2_Db	KnownBoundary	0	0.00	0.00	1.36	1.37	4.33	2.56	0.00	0.00	5.50	1.32	2.16	11.70	6.82	16.60	0.00	7.18	15.90	4.15	0.00	0.00	0.00	0.00	12.38
35	E2b_E4a	KnownJunction	0	0.00	0.00	1.69	2.00	0.00	0.00	0.00	0.00	0.00	0.00	2.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	E2b_E5a	KnownJunction	0	2183.79	14.80	220.13	157.16	311.46	210.90	122.07	283.37	550.75	80.26	367.51	45.76	122.39	1632.24	1507.76	952.49	988.78	25.99	32.66	0.00	10.93	53.82	62.74
37	E2b_E5c	KnownJunction	0	36.90	0.00	3.02	1.90	0.00	5.28	0.00	3.61	6.74	0.00	10.58	0.00	0.00	25.72	8.90	14.95	3.93	0.00	0.00	0.00	0.00	3.12	0.00
38	E2_Af	KnownBoundary	0	0.00	0.00	1.71	0.00	3.31	0.00	0.00	0.00	1.13	0.00	4.95	0.00	13.15	2.41	10.26	11.02	7.11	0.00	0.00	0.00	0.00	0.00	0.00
39	ER2g	ExonRegion	0	10.58	2.03	4.90	0.00	5.35	3.36	0.66	0.00	6.18	2.87	5.80	12.27	14.07	49.54	22.73	16.84	13.20	3.70	0.00	0.00	0.00	2.08	6.36
40	ER2h	ExonRegion	0	35.83	0.89	5.32	2.50	16.08	2.30	2.79	3.63	7.93	1.08	10.12	2.15	16.45	83.94	30.90	41.70	41.88	1.98	1.12	0.00	0.00	1.65	4.86
41	E2c_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER2i	ExonRegion	0	2.12	0.00	0.00	0.00	0.00	3.67	0.00	1.73	0.00	0.00	0.00	0.00	0.00	1.62	0.00	0.00	3.30	0.00	0.00	0.00	0.00	0.00	0.00
43	ER3a	ExonRegion	0	42.39	1.57	3.53	2.35	21.67	7.09	6.14	3.98	7.79	1.32	14.89	7.25	27.29	94.08	24.46	57.39	56.04	0.03	0.00	0.00	0.85	6.39	3.43
44	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	I3	Intron	1	125.90	3.28	12.17	8.91	95.70	10.78	16.28	15.14	18.82	4.67	29.13	15.87	38.64	150.86	45.67	78.74	78.98	2.74	2.90	0.53	1.28	7.85	6.20
46	I3_SR1	SilentIntronRegion	0	125.46	1.76	8.83	7.78	65.08	8.38	11.90	9.06	15.41	2.90	22.85	13.38	32.33	140.62	32.28	85.40	78.08	2.00	1.14	0.00	0.00	8.23	3.16
47	I3_AR1	ActiveIntronRegion	1	126.07	3.48	12.62	9.07	99.78	11.10	16.86	15.95	19.28	4.90	29.97	16.20	39.49	152.33	47.46	77.94	79.17	2.84	3.13	0.60	1.44	7.81	6.60
48	E4_Aa	NovelBoundary	0	113.65	25.39	62.89	55.40	61.71	13.63	21.51	109.30	101.91	52.27	38.96	30.91	33.60	105.66	56.12	36.66	38.99	94.22	14.02	18.54	3.03	14.21	12.29
49	ER4a	ExonRegion	0	161.01	9.90	17.93	10.67	94.45	10.09	21.57	13.37	25.18	4.35	25.80	17.25	42.77	137.03	74.93	83.64	58.39	6.20	5.81	7.48	5.04	12.73	18.62
50	E4_Da	KnownBoundary	1	144.32	0.00	24.04	24.21	146.77	7.15	21.86	22.96	26.94	3.95	37.22	6.00	95.61	111.96	80.60	70.49	29.73	7.13	4.80	0.00	0.00	10.72	0.00
51	ER4b	ExonRegion	1	135.20	5.10	19.72	13.41	147.60	11.71	10.80	15.73	24.47	2.96	31.94	11.25	55.55	121.92	65.16	68.19	39.02	4.30	0.63	0.00	0.00	12.86	6.14
52	I4	Intron	0	154.76	3.95	15.21	14.47	112.92	6.62	13.23	15.73	23.00	3.16	18.07	18.29	39.68	68.34	45.05	34.11	30.25	1.78	0.29	0.00	0.00	11.76	4.08
53	I4_AR1	ActiveIntronRegion	0	185.67	4.92	17.32	17.04	137.76	8.73	14.17	18.30	27.73	3.57	20.61	21.20	50.48	70.58	46.65	37.32	29.59	1.50	0.50	0.00	0.00	14.88	4.83
54	E5_Aa	NovelBoundary	0	235.15	2.89	25.58	23.74	61.29	16.47	11.39	24.32	20.54	5.80	22.27	19.36	18.99	127.55	75.16	81.18	61.24	8.75	0.00	0.00	5.44	6.06	12.38
55	ER5a	ExonRegion	1	2162.82	21.61	210.46	144.64	320.09	172.61	86.72	235.07	504.70	76.84	373.53	35.72	150.67	1746.33	1480.73	1074.80	948.59	19.40	22.30	0.00	11.57	84.90	74.15
56	ER5b	ExonRegion	0	3213.52	32.80	246.35	169.03	541.90	252.86	133.52	331.56	568.21	108.06	672.35	110.87	328.51	1860.32	1698.75	1479.15	1569.43	19.72	15.03	1.11	11.16	81.57	68.05
57	E5_Ab	KnownBoundary	0	4896.65	44.86	248.07	176.90	783.36	412.21	271.38	394.56	528.18	128.00	1031.95	152.45	411.17	1667.38	1662.16	1862.08	2093.59	18.82	12.24	3.26	6.05	76.66	51.90
58	ER5c	ExonRegion	1	5119.17	48.26	240.07	186.83	781.61	384.70	258.07	496.81	553.46	143.95	1128.24	111.04	386.99	1845.57	1628.70	1938.63	2219.36	31.11	22.64	1.55	8.58	74.56	52.46
59	E5_Ac	KnownBoundary	1	6730.38	49.93	191.18	180.36	927.00	426.86	250.54	554.99	464.84	127.49	1164.72	84.78	285.53	2205.03	1971.70	2134.82	2300.79	32.13	38.87	0.00	14.83	68.34	45.41
60	ER5d	ExonRegion	1	5001.23	46.60	258.79	234.14	757.91	341.60	209.85	564.97	593.67	147.59	1003.32	132.68	291.02	2087.93	1886.97	2080.62	2156.58	49.53	20.50	0.40	8.87	99.79	70.58
61	E5_Db	NovelBoundary	1	2329.08	29.34	154.07	182.73	382.26	144.29	101.04	393.53	426.41	90.36	431.74	35.56	75.00	787.93	765.56	729.21	1247.40	20.64	3.76	3.00	5.81	55.05	29.62
62	E5b_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
63	E5c_E7a	KnownJunction	1	2473.48	93.27	337.45	348.57	1058.40	576.20	450.77	620.92	734.86	124.02	848.64	149.45	230.18	1657.37	1756.85	1730.66	1880.78	46.84	11.58	0.00	6.30	119.47	101.75
64	ER5e	ExonRegion	1	2332.93	65.33	283.14	290.04	823.46	444.12	337.28	633.05	644.50	138.06	881.04	122.31	231.28	1727.45	1872.76	1595.47	2072.96	44.58	8.16	2.13	9.64	106.52	78.56
65	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.05	0.00	0.00	0.20	0.00	0.00	0.00	0.00	0.00	0.00
66	ER7a	ExonRegion	0	882.89	35.62	321.11	365.31	2446.09	931.31	573.80	733.50	699.99	145.92	1105.67	255.79	679.17	1846.76	1961.40	2732.37	2301.02	38.07	19.97	1.02	6.87	115.72	92.52
67	E7a_E8a	KnownJunction	0	1053.22	26.18	315.72	440.50	2710.27	635.54	409.92	942.16	893.39	198.51	1100.33	287.34	1448.61	2079.83	2180.24	4723.55	2469.75	42.57	51.11	0.00	12.60	135.82	189.85
68	E7b_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	4.11	9.12	0.00	0.00	2.26	0.00	6.66	0.00	0.00	20.51	17.86	0.00	0.00	0.00	0.00	0.00	0.00
69	ER7b	ExonRegion	0	2.99	0.00	0.07	0.48	3.31	2.70	6.07	9.35	0.36	0.67	6.94	0.00	8.55	2.20	5.63	24.30	21.16	0.00	0.19	0.00	0.00	0.12	0.17
70	ER8a	ExonRegion	0	715.82	20.84	308.23	427.89	1771.90	408.40	261.59	698.58	852.64	148.33	838.15	280.69	1053.89	2363.64	2756.31	4219.68	1944.09	46.42	70.74	0.00	13.87	175.19	207.52
71	ER9a	ExonRegion	1	1664.71	18.37	113.53	148.85	581.31	182.81	119.44	177.87	270.16	39.74	307.07	110.27	428.71	655.70	671.43	1020.13	807.53	10.64	15.21	0.16	2.90	48.05	37.68
72	ER9b	ExonRegion	0	3.17	0.00	0.00	0.00	1.34	0.00	0.00	0.86	0.00	0.00	0.00	2.16	0.00	0.00	2.90	0.00	1.65	0.00	0.00	0.00	0.00	0.00	0.00
73	IG50	Intergenic	0	16.82	0.56	2.62	1.38	11.86	2.46	3.34	2.94	9.04	1.04	2.74	6.16	5.82	6.11	3.53	6.89	13.05	0.34	0.12	0.08	0.00	0.15	0.22
74	IG50_AR1	ActiveIntergenicRegion	0	42.20	1.26	4.75	3.50	28.47	7.58	7.46	7.59	16.21	2.27	6.66	9.98	16.55	16.33	8.37	14.74	25.12	0.78	0.00	0.30	0.00	0.44	0.62
75	IG50_SR1	SilentIntergenicRegion	0	14.30	1.05	4.99	1.26	15.12	2.02	5.00	5.35	12.13	1.86	4.23	4.84	5.21	4.31	5.04	9.70	15.69	0.00	0.00	0.00	0.00	0.00	0.00
76	IG50_AR2	ActiveIntergenicRegion	0	13.91	0.44	1.23	1.36	18.54	0.00	3.03	2.72	11.65	1.97	1.24	7.73	0.00	1.28	4.14	3.61	7.54	0.00	0.00	0.00	0.00	0.00	0.00
77	IG50_AR3	ActiveIntergenicRegion	0	11.04	0.29	2.94	0.15	7.58	1.06	2.38	2.09	7.57	1.01	1.37	8.83	3.42	3.16	2.49	5.24	13.45	0.00	0.00	0.00	0.00	0.00	0.00