Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	GTF2H4	Gene	0	21.84	13.71	26.32	30.46	23.14	47.54	16.19	24.96	31.59	20.08	16.17	4.04	2.71	19.04	25.40	28.60	13.24	24.43	42.88	11.67	15.52	24.88	26.80
2	259895	Transcript	0	7.19	10.54	4.71	2.01	20.56	31.66	13.45	3.59	3.61	0.88	1.42	5.92	0.00	11.58	5.42	11.42	2.35	8.17	21.54	4.20	0.93	4.93	11.28
3	376316	Transcript	0	0.00	0.00	15.20	7.49	3.74	2.44	0.00	6.57	7.55	8.30	9.95	5.40	0.00	4.59	0.00	3.42	13.09	2.53	43.58	2.49	7.97	2.57	0.00
4	453897	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.05	0.00
5	487746	Transcript	0	37.91	7.32	30.76	80.14	23.34	74.40	16.33	33.31	48.45	21.91	19.22	10.16	2.37	22.99	30.16	28.99	10.91	24.55	41.72	12.10	27.92	46.29	33.05
6	483318	Transcript	0	13.83	4.73	9.46	11.20	13.00	27.04	10.30	18.23	16.06	6.52	11.39	5.36	1.94	11.27	16.81	12.16	5.01	17.04	17.46	7.41	15.79	18.36	18.04
7	475845	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	IG12_AR1	ActiveIntergenicRegion	0	6.74	19.87	13.19	3.02	7.39	0.00	4.78	4.38	5.08	2.18	13.14	0.76	5.28	3.53	1.92	0.00	2.10	3.52	14.89	12.21	0.94	17.26	8.74
9	ER1a	ExonRegion	0	7.19	10.54	4.71	2.01	20.56	31.66	13.45	3.59	3.61	0.88	1.42	5.92	0.00	11.58	5.42	11.42	2.35	8.17	21.54	4.20	0.93	4.93	11.28
10	E1_Ab	KnownBoundary	0	3.04	0.00	0.00	0.00	11.46	6.76	2.03	0.00	0.00	0.00	0.00	5.55	0.00	2.30	0.00	3.67	3.46	1.99	4.05	0.00	0.00	0.00	0.00
11	E1_Ac	KnownBoundary	0	14.89	30.19	14.87	9.56	58.40	64.62	32.15	9.86	11.75	8.57	6.11	0.00	0.00	0.00	0.00	43.92	7.95	9.66	66.26	10.74	2.72	11.76	37.39
12	ER1b	ExonRegion	0	80.43	88.46	41.05	29.98	192.65	247.56	86.72	25.06	28.41	17.78	29.96	8.66	4.69	34.92	85.59	132.26	37.96	55.43	221.38	43.62	19.83	28.13	138.02
13	ER1c	ExonRegion	0	70.32	64.52	76.38	43.70	141.49	153.91	60.89	45.46	47.62	43.35	40.30	1.34	1.21	44.71	60.10	102.36	50.28	53.18	191.47	29.87	37.36	42.65	87.59
14	E1_Da	NovelBoundary	0	6.82	0.00	87.67	36.83	4.24	0.00	0.00	64.28	43.34	46.74	31.27	0.00	7.63	43.32	32.88	28.37	51.99	21.60	83.86	33.11	28.85	37.96	21.94
15	E1a_E2a	KnownJunction	0	0.00	0.00	15.20	7.49	3.74	2.44	0.00	6.57	7.55	8.30	9.95	5.40	0.00	4.59	0.00	3.42	13.09	2.53	43.58	2.49	7.97	2.57	0.00
16	E1b_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER1d	ExonRegion	1	0.00	0.00	76.02	45.68	0.00	0.00	0.00	51.09	41.40	45.28	14.69	0.00	0.00	60.74	65.57	118.29	26.41	52.77	223.10	51.74	13.93	74.42	115.70
18	ER2a	ExonRegion	0	0.00	13.26	24.64	18.69	66.17	128.64	53.79	12.74	12.92	14.01	2.33	1.79	0.00	28.56	48.87	72.77	4.57	34.13	129.05	16.37	1.56	26.55	66.68
19	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER3a	ExonRegion	0	1.06	59.48	1.23	0.00	22.41	115.30	61.23	1.73	0.00	1.15	3.87	0.00	0.00	1.62	0.00	0.00	0.00	0.00	0.00	0.00	2.20	0.00	0.00
21	ER3b	ExonRegion	0	21.93	63.21	0.51	0.00	2.18	27.32	11.36	0.71	0.00	1.37	1.14	0.00	0.00	0.55	0.00	0.00	0.00	1.45	0.00	1.12	0.66	0.00	0.00
22	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER4a	ExonRegion	0	44.83	14.45	0.00	0.00	0.00	1.40	0.51	0.00	0.41	0.00	0.00	1.38	1.49	0.00	0.00	1.10	0.00	0.00	0.00	0.00	0.83	0.77	0.00
24	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E5_Aa	NovelBoundary	0	42.45	27.76	107.09	121.50	32.34	27.26	60.46	136.32	99.07	80.40	0.00	5.40	8.28	7.06	8.90	40.16	28.61	131.99	4.24	28.38	18.90	13.59	32.52
27	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.10	0.00
28	ER6a	ExonRegion	0	19.55	2.64	0.00	0.00	0.00	1.81	0.05	1.35	0.38	0.00	0.00	0.00	0.00	0.00	0.00	0.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER7a	ExonRegion	0	10.56	3.75	0.00	0.00	2.89	10.98	5.00	0.00	0.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	2.03	0.00	0.00	1.26	1.19	0.00
31	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER8a	ExonRegion	0	7.46	11.31	1.97	8.10	4.73	36.73	8.92	2.87	8.30	2.53	0.59	0.00	0.00	4.92	4.82	6.69	0.00	3.89	7.28	1.92	2.36	9.84	1.84
33	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER9a	ExonRegion	0	14.17	7.54	15.84	30.28	13.30	41.54	9.94	13.73	22.91	6.58	8.57	0.50	2.11	11.72	11.44	13.44	2.49	8.89	5.12	6.11	12.78	20.96	15.32
35	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER10a	ExonRegion	0	10.96	4.77	47.21	73.47	12.20	47.59	14.36	44.38	76.27	38.08	21.33	9.12	2.62	54.33	48.22	42.35	32.30	37.26	44.82	20.64	18.97	45.81	39.09
37	E10_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	E10a_E10c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER10b	ExonRegion	0	37.91	7.32	30.76	80.14	23.34	74.40	16.33	33.31	48.45	21.91	19.22	10.16	2.37	22.99	30.16	28.99	10.91	24.55	41.72	12.10	27.92	46.29	33.05
40	E10_Ab	KnownBoundary	0	70.53	5.06	38.94	87.14	29.03	93.01	17.44	52.45	40.71	27.53	25.53	24.61	0.00	35.61	26.95	37.34	13.46	32.13	59.39	15.21	24.53	59.15	33.12
41	ER10c	ExonRegion	0	49.42	9.23	40.40	104.79	50.41	103.45	23.62	38.99	41.44	37.83	30.37	10.58	11.69	22.22	30.21	41.56	16.61	37.01	62.85	17.56	25.61	51.26	54.77
42	E10_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	ER10d	ExonRegion	0	22.90	14.65	84.10	88.18	21.02	59.99	18.78	79.69	109.57	81.68	51.32	13.09	11.37	44.91	55.96	44.54	45.56	55.68	62.21	32.83	34.37	54.72	33.73
44	E10_Db	KnownBoundary	0	13.78	0.00	6.42	7.13	0.00	19.65	4.02	8.21	0.00	4.32	2.58	6.30	0.00	4.89	8.90	7.18	0.00	5.35	8.38	3.26	0.00	5.45	4.35
45	E10b_E10e	KnownJunction	0	90.24	77.42	192.48	166.08	102.97	88.07	61.92	196.29	237.76	169.79	202.37	46.07	59.90	199.31	317.45	224.30	139.69	205.15	210.92	97.73	96.74	192.40	124.63
46	ER10e	ExonRegion	0	3.13	1.35	3.07	2.28	6.50	11.19	3.03	1.89	0.00	1.52	0.00	0.90	0.00	5.32	3.54	3.09	2.19	0.00	2.56	2.82	0.00	1.73	7.28
47	E10_Ad	KnownBoundary	0	6.22	0.00	1.54	3.10	12.99	16.47	6.76	2.55	1.79	0.00	0.00	0.00	0.00	2.41	0.00	0.00	0.00	0.00	0.00	3.26	0.00	0.00	7.85
48	ER10f	ExonRegion	0	6.53	1.49	2.08	1.92	7.36	26.91	9.95	2.30	3.22	1.51	1.69	0.29	0.49	2.41	4.50	1.75	1.48	3.10	3.64	1.44	1.15	2.40	2.13
49	E10_Ae	KnownBoundary	0	6.37	0.00	3.40	1.66	0.00	10.85	12.76	0.00	5.09	0.00	4.69	0.00	0.00	2.30	11.50	3.85	0.00	4.73	0.00	0.00	2.41	5.76	0.00
50	ER10g	ExonRegion	0	36.18	22.78	100.48	103.47	27.09	78.23	26.64	103.92	150.44	94.36	83.62	8.33	16.67	68.01	103.28	79.47	62.41	99.69	86.69	41.11	50.99	79.24	81.55
51	E10_Dc	KnownBoundary	0	19.48	9.80	28.77	31.40	28.44	38.27	14.26	26.00	72.48	22.83	27.59	0.00	6.82	21.31	34.37	7.43	9.35	39.55	7.53	14.45	21.13	19.66	19.12
52	ER10h	ExonRegion	0	10.55	3.47	32.61	23.82	5.39	25.90	5.87	38.61	68.31	39.65	34.08	5.33	3.97	9.24	15.18	12.89	19.91	19.84	13.82	18.66	31.56	19.71	14.37
53	E10d_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	ER11a	ExonRegion	0	41.14	3.26	90.04	66.13	17.78	48.33	15.78	94.27	106.40	75.70	62.50	9.74	0.00	48.05	63.77	75.79	47.38	96.93	108.04	31.74	61.52	85.99	44.84
55	E11_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
56	E11a_E11b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
57	ER11b	ExonRegion	0	24.52	8.11	15.84	20.12	19.50	42.89	17.57	34.58	32.13	11.52	22.78	9.83	3.89	17.22	30.08	21.24	7.84	34.07	32.36	12.01	31.58	34.98	28.79
58	E11_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	ER11c	ExonRegion	1	24.83	2.14	38.87	42.06	7.48	14.81	2.09	44.54	43.51	20.47	20.59	5.38	9.74	38.83	51.03	49.84	5.88	53.40	43.17	10.77	26.02	34.73	35.28
60	E11b_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
61	ER12a	ExonRegion	0	5.77	3.85	3.28	2.33	3.16	12.92	5.00	4.09	3.28	0.40	0.97	0.61	0.67	2.26	4.41	4.05	0.57	6.50	3.16	1.36	1.62	5.30	5.78