Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	HLA-C	Gene	0	1380.98	16.67	637.66	300.05	411.24	582.45	96.62	636.77	797.36	207.23	1181.26	847.69	748.26	2853.74	3837.58	2039.06	1295.86	0.78	0.44	10.83	727.95	818.83	413.20
2	495835	Transcript	0	12.54	0.00	3.16	0.89	2.26	27.58	1.78	3.99	1.09	2.16	14.05	0.00	0.00	44.60	28.34	0.00	0.00	0.00	0.00	0.00	6.19	6.73	11.29
3	376237	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.51	1.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	423188	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	484378	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	396254	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	376228	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	383329	Transcript	0	0.00	0.00	0.00	0.00	161.12	0.00	0.00	178.75	0.00	0.00	4.47	5.85	0.00	922.42	1099.58	0.00	0.00	0.00	0.00	0.00	161.12	0.00	0.00
9	458701	Transcript	0	13.64	0.00	1.36	0.53	7.07	2.37	1.34	0.11	1.74	0.09	5.96	3.26	2.83	19.55	16.62	5.13	2.38	0.00	0.00	0.00	1.03	1.10	0.01
10	415537	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11	487245	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
12	470363	Transcript	0	150.55	0.77	68.25	16.36	49.84	31.11	5.88	52.68	53.03	4.62	57.32	39.78	21.23	120.28	76.59	90.17	39.11	0.00	0.00	0.00	18.09	12.11	14.04
13	466892	Transcript	0	166.64	1.81	38.51	15.21	44.65	31.02	12.33	46.38	41.55	11.09	67.74	56.20	42.34	161.61	215.31	175.36	58.87	0.02	0.00	1.18	42.09	47.42	46.42
14	ER1a	ExonRegion	0	12.54	0.00	3.16	0.89	2.26	27.58	1.78	3.99	1.09	2.16	14.05	0.00	0.00	44.60	28.34	0.00	0.00	0.00	0.00	0.00	6.19	6.73	11.29
15	E1_Ac	KnownBoundary	0	30.75	0.00	0.00	0.00	0.00	16.35	2.03	0.00	0.00	0.00	14.48	0.00	0.00	0.00	0.00	30.76	29.92	0.00	0.00	0.00	34.35	8.63	3.76
16	E1_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E1_Ae	KnownBoundary	0	48.90	0.00	8.75	6.19	30.05	28.56	2.25	10.02	13.31	6.63	18.48	0.00	0.00	0.00	6.30	65.37	23.84	0.00	0.00	0.00	25.21	12.49	12.89
18	E1_Af	KnownBoundary	0	82.90	3.35	10.64	7.96	30.31	94.55	4.46	9.94	1.74	3.22	29.38	0.00	0.00	3.00	6.30	47.94	28.61	0.00	0.00	3.26	81.79	3.12	30.39
19	ER1b	ExonRegion	0	46.24	0.00	13.38	1.36	28.82	131.33	6.11	11.30	3.71	3.44	30.03	0.00	0.00	170.91	92.17	0.00	0.00	0.00	0.00	1.64	30.68	20.84	30.72
20	E1_Ag	KnownBoundary	0	27.49	0.00	11.18	0.00	0.00	17.09	0.00	14.66	3.18	1.67	5.26	0.00	0.00	217.49	47.22	21.11	9.35	0.00	0.00	0.00	6.18	3.12	0.00
21	ER1c	ExonRegion	0	63.50	0.00	15.32	1.36	32.11	165.04	7.94	13.83	4.32	3.44	30.93	2.16	0.00	219.26	108.80	0.00	0.00	0.00	0.00	2.13	33.06	22.92	32.30
22	ER1d	ExonRegion	0	64.55	0.00	15.93	1.36	32.11	166.88	7.94	13.83	4.94	3.44	30.93	4.33	1.17	228.59	108.80	0.00	0.00	0.00	0.00	2.13	33.06	22.92	32.30
23	ER1e	ExonRegion	0	718.48	3.13	84.83	20.55	111.76	565.37	54.59	84.30	92.63	23.56	163.85	6.99	4.69	787.20	1145.99	483.77	295.56	0.71	0.00	3.76	112.90	138.95	158.80
24	E1_Ah	KnownBoundary	1	9677.57	55.38	572.13	390.03	3459.68	4801.72	603.44	646.46	839.89	268.81	3817.65	21.91	31.33	3216.16	6155.28	8846.48	4043.85	4.60	0.00	15.53	1985.96	940.61	2381.97
25	ER1f	ExonRegion	1	2270.49	13.73	250.59	124.36	288.98	1492.71	141.99	258.84	336.88	118.42	452.78	21.65	5.86	2029.34	3498.19	2229.09	1134.68	3.70	0.00	6.38	284.28	319.82	535.94
26	ER1g	ExonRegion	1	2755.26	21.83	319.89	168.85	281.38	1888.72	174.07	331.59	446.98	156.82	439.58	21.65	9.38	3090.53	4933.20	2903.45	1415.56	3.70	0.00	9.97	270.48	466.82	635.40
27	ER1h	ExonRegion	0	1487.62	14.24	319.49	175.84	123.29	1041.20	95.87	335.42	455.78	165.74	223.76	31.92	29.24	1322.13	1695.30	1803.38	822.25	3.66	0.00	6.76	133.99	267.88	351.13
28	E1_Da	KnownBoundary	0	32.60	0.00	3.76	0.00	3.99	4.37	0.00	8.75	1.27	0.00	0.00	0.00	0.00	4.94	6.06	12.22	4.21	0.00	0.00	0.00	0.00	3.12	0.00
29	E1a_E1i	KnownJunction	0	143.51	6.05	66.56	39.79	0.00	131.86	7.64	52.62	67.71	37.79	43.01	18.76	65.90	131.85	289.39	371.36	161.20	0.00	0.00	0.00	34.90	35.88	49.51
30	ER1i	ExonRegion	0	7.38	0.05	9.46	4.46	1.29	3.50	0.08	15.07	11.67	3.18	11.18	8.63	1.00	39.02	44.36	52.41	33.66	0.00	0.00	0.08	6.16	5.79	4.26
31	E1_Ai	KnownBoundary	0	3.78	0.00	31.67	49.61	4.16	5.62	0.00	30.23	25.32	4.54	14.79	0.00	6.66	53.15	78.00	264.12	17.86	0.00	0.00	0.00	5.19	12.12	26.04
32	ER1j	ExonRegion	0	352.86	7.07	532.24	245.58	321.44	543.65	57.27	437.50	656.71	199.92	1379.91	533.60	470.69	2581.09	3489.15	1646.85	1288.47	1.39	0.00	8.80	840.36	530.47	400.19
33	E1_Db	KnownBoundary	0	85.94	2.43	32.08	16.28	84.04	113.06	22.48	29.24	103.04	16.87	117.19	48.47	38.63	136.50	114.59	0.00	0.00	0.00	0.00	2.81	0.00	5.88	8.02
34	E1b_E1j	KnownJunction	0	304.50	15.06	1135.38	266.63	947.79	1268.13	170.20	300.33	1157.48	333.81	1257.27	662.02	596.06	2494.21	2786.71	67.25	56.57	0.00	0.00	17.39	17.05	504.14	248.58
35	E1b_E1k	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.51	1.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER1k	ExonRegion	0	135.49	0.04	31.10	8.58	15.20	30.84	5.62	40.33	48.59	5.92	76.08	34.84	30.10	171.21	145.36	58.84	73.04	0.00	0.00	0.07	12.71	11.23	6.41
37	E1_Aj	KnownBoundary	0	213.96	0.00	21.52	2.06	8.06	23.62	2.25	7.02	22.25	1.48	65.02	12.15	6.33	74.93	46.85	113.13	97.99	0.00	0.00	0.00	2.97	3.12	19.55
38	E1_Ak	KnownBoundary	0	1428.25	11.51	905.76	170.54	220.03	1552.00	105.77	154.03	959.05	170.55	1427.10	679.27	660.67	1642.42	1989.74	759.29	710.42	0.00	0.00	14.06	532.46	507.38	241.83
39	ER1l	ExonRegion	0	813.74	12.92	1089.64	265.76	526.65	1406.74	139.48	290.99	1221.24	195.99	1796.57	1082.62	1083.12	2726.80	3069.87	690.23	761.34	0.00	0.00	18.27	537.06	683.15	239.94
40	ER1m	ExonRegion	0	1862.94	17.64	1616.89	497.78	200.10	705.63	125.76	835.42	1448.69	387.42	1596.17	1018.56	1031.06	5059.61	5573.57	3107.49	2798.86	1.31	2.58	29.26	1109.08	1362.47	586.44
41	E1_Dc	NovelBoundary	0	8258.95	110.44	3517.82	1799.04	2086.76	2441.04	483.67	3643.84	4568.88	1094.65	6486.27	3592.02	3316.02	12000.18	13171.68	14452.79	10226.45	26.82	39.25	228.18	5247.55	3281.38	2462.81
42	E1d_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	E1d_E3a	KnownJunction	1	3748.07	13.02	1583.30	751.85	891.17	1512.99	207.30	1190.90	1787.22	400.19	2079.74	228.22	238.62	6111.46	9695.06	4340.14	2249.93	6.14	4.33	20.90	1273.79	2159.03	1141.13
44	ER1n	ExonRegion	0	2197.27	5.94	2501.50	833.56	366.47	1275.05	181.69	1795.46	2424.67	547.69	1846.22	1406.41	1393.48	7246.63	7753.15	3619.02	2696.58	4.05	1.96	29.87	670.94	1828.85	1181.89
45	E2_Aa	NovelBoundary	0	323.61	14.21	119.42	63.53	130.05	18.17	19.21	125.48	108.71	11.52	147.09	120.94	83.11	174.64	127.33	277.02	205.33	0.00	8.75	21.92	41.95	177.15	70.51
46	ER2a	ExonRegion	0	40.92	0.00	4.07	1.58	21.21	7.10	4.01	0.33	5.21	0.27	17.87	9.79	8.50	58.66	49.87	15.38	7.13	0.00	0.00	0.00	3.10	3.29	0.04
47	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	ER3a	ExonRegion	0	2027.76	18.86	2097.26	667.81	149.90	1011.91	141.24	1603.16	2031.50	465.64	821.19	455.15	613.50	5469.96	6517.02	1865.29	1326.47	4.95	0.00	20.28	616.38	1466.27	513.54
49	E3_Da	KnownBoundary	1	5437.11	64.40	1516.86	800.63	627.42	1531.45	397.02	1647.40	2094.94	530.68	1537.81	294.85	309.72	4249.59	4613.03	5042.61	2898.64	0.00	0.00	18.98	1151.22	1469.24	529.42
50	E3a_E3c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.37	0.00	0.00	0.00	18.30	6.41	0.00	0.00	0.00	0.00	2.90	0.00	0.00
51	E3_Ab	KnownBoundary	0	5048.15	68.41	1819.63	698.15	956.54	1007.43	220.42	1328.91	1445.85	295.54	1961.18	1068.05	950.59	4623.13	4010.02	5695.94	2897.43	32.13	32.28	41.80	1096.67	1297.66	714.40
52	ER3b	ExonRegion	1	3107.17	29.55	1377.10	413.92	156.61	1013.23	147.89	960.51	1364.29	321.54	1556.55	368.51	483.63	4116.66	4807.55	2131.19	2472.18	3.37	0.00	15.27	1427.10	1155.62	339.79
53	ER3c	ExonRegion	0	3034.55	31.98	1173.54	361.12	350.41	930.46	151.43	781.66	1338.92	276.61	1624.06	694.47	738.81	4860.40	6206.26	1979.17	1963.13	3.01	3.57	42.18	1023.47	1278.27	396.41
54	E3_Ac	KnownBoundary	1	11195.24	170.89	2145.43	1294.24	2514.43	2337.01	773.51	2505.11	2982.17	877.58	6840.42	1738.92	1557.37	7695.66	10002.00	9408.90	6113.69	2.36	0.00	63.60	3924.72	2687.84	1602.86
55	ER3d	ExonRegion	0	3468.59	45.83	979.13	579.47	445.46	1097.38	219.27	1008.46	1315.13	375.34	1408.15	719.95	782.81	6058.04	7937.56	2839.73	1710.52	0.96	0.00	19.23	1016.77	1542.07	547.52
56	E3_Db	NovelBoundary	0	1518.20	26.84	388.99	5.96	0.00	408.12	57.72	415.55	458.91	3.98	4.90	0.00	0.00	1451.30	1736.70	15.21	13.00	0.00	0.00	2.24	3.15	525.44	0.00
57	E3e_E4a	KnownJunction	1	3529.29	65.32	778.71	187.49	4.07	1855.75	348.53	938.17	937.55	147.39	459.22	35.86	23.70	5075.84	7213.81	2365.45	1621.13	0.00	0.00	33.68	295.48	1712.95	252.50
58	ER3e	ExonRegion	0	2232.93	57.96	647.61	511.54	0.00	1460.01	264.79	818.13	831.44	337.95	107.28	106.79	128.19	5089.18	6196.11	705.88	616.17	0.00	0.00	23.40	96.60	1424.78	88.59
59	ER3f	ExonRegion	0	2124.98	58.97	649.45	515.17	0.00	1487.21	275.38	840.03	841.11	352.10	85.05	99.58	117.25	5088.37	6287.01	695.48	699.79	0.00	0.00	21.28	79.33	1398.04	99.85
60	ER3g	ExonRegion	0	2133.98	56.43	654.65	520.62	6.69	1545.43	281.67	856.88	853.46	363.57	131.92	110.40	152.43	5170.79	6411.04	1038.76	906.10	0.00	0.00	21.28	175.19	1448.05	125.54
61	ER4a	ExonRegion	0	1585.38	35.44	696.42	281.08	279.62	1385.71	237.65	1050.90	986.22	212.78	772.13	579.32	577.97	5084.02	7261.79	1890.99	1275.77	0.43	0.00	18.88	664.12	1481.50	333.53
62	E4_Da	KnownBoundary	0	61.71	0.00	15.26	0.00	3.31	20.67	8.04	20.50	13.31	0.00	2.05	0.00	12.01	113.13	109.40	0.00	11.31	0.00	0.00	0.00	0.00	3.12	0.00
63	E4a_E4c	KnownJunction	0	0.00	0.00	0.00	0.00	161.12	0.00	0.00	178.75	0.00	0.00	4.47	5.85	0.00	922.42	1099.58	0.00	0.00	0.00	0.00	0.00	161.12	0.00	0.00
64	E4a_E4d	KnownJunction	0	4148.51	25.92	1260.10	910.17	1855.26	1930.93	364.08	1578.85	1851.98	542.48	3337.16	3314.88	2566.71	8945.71	12332.69	8487.09	3515.00	2.28	0.00	8.25	1934.00	2237.47	1919.90
65	E4_Db	KnownBoundary	0	77.42	0.00	25.90	5.83	10.44	56.50	6.09	6.86	16.72	0.00	10.53	12.00	0.00	63.92	50.19	20.34	14.96	0.00	0.00	0.00	0.00	11.63	3.41
66	E4b_E4e	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
67	ER4b	ExonRegion	0	97.21	0.00	53.03	8.79	22.79	42.94	9.22	46.43	39.27	3.76	41.66	24.78	11.32	130.88	97.84	65.80	34.83	0.00	0.00	0.00	7.45	9.34	12.25
68	ER4c	ExonRegion	0	150.55	0.77	68.25	16.36	49.84	31.11	5.88	52.68	53.03	4.62	57.32	39.78	21.23	120.28	76.59	90.17	39.11	0.00	0.00	0.00	18.09	12.11	14.04
69	E4_Ab	KnownBoundary	0	295.24	9.74	46.48	19.15	32.94	22.54	2.21	66.99	55.41	11.12	35.96	6.75	0.00	88.70	83.44	67.76	36.00	0.00	0.00	0.00	9.14	11.08	16.82
70	ER4d	ExonRegion	0	211.98	3.60	65.51	16.30	93.80	39.93	9.08	52.46	57.80	10.04	80.96	61.63	12.54	106.53	104.04	94.02	44.17	0.00	0.00	0.00	15.23	11.47	16.59
71	E4_Ac	KnownBoundary	0	353.10	10.06	126.10	24.61	71.39	57.30	28.09	96.85	83.85	7.68	111.13	41.56	7.95	63.75	40.30	111.34	96.59	0.00	0.00	0.00	33.36	14.82	36.62
72	E4_Ad	KnownBoundary	0	292.27	3.29	51.24	15.62	240.66	31.06	2.25	198.96	36.28	9.03	113.66	43.96	39.77	979.17	986.71	113.56	27.86	0.00	0.00	0.00	196.58	9.00	12.55
73	ER4e	ExonRegion	0	351.11	10.62	118.18	51.41	215.25	111.66	16.33	238.91	137.44	26.51	241.72	217.68	190.47	1466.13	1716.25	522.60	201.35	0.10	0.00	1.06	302.64	137.28	88.43
74	ER4f	ExonRegion	0	3063.66	38.45	1186.27	829.36	1422.08	1535.35	247.29	1762.05	1956.07	473.38	3698.84	4242.07	3630.67	8652.39	13828.91	11632.34	3985.73	1.85	0.00	20.74	2707.60	3336.30	2189.91
75	E4_Dc	KnownBoundary	0	174.62	8.62	13.63	1.93	40.83	33.16	2.12	16.47	20.51	1.29	35.64	25.66	0.00	54.09	69.84	50.24	26.18	0.00	0.00	0.00	10.81	9.25	46.35
76	E4c_E4e	KnownJunction	1	3715.92	53.54	1215.10	1065.83	1746.78	1582.78	268.86	1712.75	2041.04	568.56	3938.63	4173.61	3761.28	9181.63	12866.09	14014.87	4269.37	0.00	0.00	34.52	2919.85	4442.80	2659.74
77	ER4g	ExonRegion	0	166.64	1.81	38.51	15.21	44.65	31.02	12.33	46.38	41.55	11.09	67.74	56.20	42.34	161.61	215.31	175.36	58.87	0.02	0.00	1.18	42.09	47.42	46.42
78	E4_Ae	KnownBoundary	0	144.03	3.22	20.22	6.73	74.70	16.18	19.83	28.09	16.46	1.48	41.85	18.31	6.82	68.10	86.66	85.79	17.48	0.00	0.00	0.00	25.82	17.33	44.99
79	ER4h	ExonRegion	0	3253.40	58.54	1774.42	1379.12	1320.11	1279.84	279.67	2379.60	2725.79	834.68	4250.65	3635.55	2892.35	9583.06	14854.29	12065.25	4753.43	0.55	0.00	28.02	3015.10	3770.86	2373.43
80	E4d_E5a	KnownJunction	0	5088.90	92.02	2006.85	1497.68	1767.91	1353.43	325.74	2583.02	2702.49	870.70	4799.64	2855.73	2311.54	9826.82	12625.41	9348.32	5698.73	0.00	0.00	29.98	3153.73	3432.69	1817.89
81	ER5a	ExonRegion	0	3314.14	37.81	996.86	645.45	1462.44	1027.88	192.10	1483.70	1590.38	415.35	3195.90	2728.47	2277.72	4998.08	7400.25	4564.42	2702.19	0.33	0.38	12.16	1790.84	1639.46	910.19