Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	AIF1	Gene	0	780.32	3.63	29.33	36.31	165.87	68.44	59.98	70.40	57.34	26.49	0.18	19.66	8.99	49.13	13.12	60.76	99.42	0.60	0.50	0.33	0.21	0.39	0.18
2	376059	Transcript	0	6.85	0.00	0.00	0.72	1.18	0.00	0.04	0.00	0.00	0.94	0.00	0.00	0.00	0.86	2.56	0.09	3.30	0.00	0.00	0.00	0.00	0.00	0.00
3	497362	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	376051	Transcript	0	15.45	0.03	0.48	0.94	3.30	1.35	1.91	0.79	1.12	1.45	0.00	1.93	0.06	2.00	0.28	3.14	2.59	0.20	1.05	0.35	1.09	0.01	0.00
5	337917	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	376063	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	466820	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	487813	Transcript	0	20.41	0.02	2.82	2.53	1.75	0.29	0.25	4.70	1.22	0.76	0.00	0.05	0.00	0.09	0.61	3.10	7.71	0.00	0.00	0.00	0.00	0.00	0.00
9	376049	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	ER1a	ExonRegion	0	6.85	0.00	0.00	0.72	1.18	0.00	0.04	0.00	0.00	0.94	0.00	0.00	0.00	0.86	2.56	0.09	3.30	0.00	0.00	0.00	0.00	0.00	0.00
11	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	1.37	4.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.45	0.00	4.58	0.00	0.00	0.00	0.00	0.00	0.00
12	E1_Ac	KnownBoundary	0	3.78	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E1_Ad	KnownBoundary	0	56.90	0.00	2.48	2.06	7.47	7.50	7.99	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.85	0.00	0.00	0.00	0.00	0.00	2.88	0.00
14	ER1b	ExonRegion	0	44.87	0.00	0.25	2.73	5.62	5.87	2.65	1.73	0.62	1.15	0.00	0.00	0.00	1.62	1.74	2.97	3.30	0.00	0.00	0.00	0.00	0.00	0.00
15	ER1c	ExonRegion	0	64.02	0.00	1.23	3.41	12.71	11.46	4.63	3.46	2.16	1.72	0.00	0.00	0.00	1.62	0.00	5.20	3.30	0.00	0.00	0.00	0.00	0.00	0.00
16	ER1d	ExonRegion	0	1125.60	12.74	17.53	33.24	297.66	252.32	164.77	64.80	54.92	16.03	0.00	0.00	0.00	8.25	6.28	21.90	11.86	0.00	2.54	0.00	0.00	0.09	0.00
17	E1_Ae	KnownBoundary	0	2205.65	28.15	13.51	24.17	512.05	416.46	287.06	48.84	35.71	6.69	0.00	0.00	0.00	11.48	4.57	27.09	26.93	0.00	4.14	0.00	0.00	0.00	0.00
18	E1_Da	KnownBoundary	0	2831.91	0.00	29.33	60.23	702.89	406.75	285.07	142.81	101.82	37.93	0.00	0.00	0.00	0.00	0.00	4.36	9.54	0.00	0.00	0.00	0.00	2.82	0.00
19	E1a_E2a	KnownJunction	0	1081.67	10.00	30.45	51.68	116.47	148.61	104.62	45.63	70.37	16.49	0.00	0.00	0.00	4.59	0.00	11.88	8.51	0.00	0.00	0.00	0.00	0.00	0.00
20	ER1e	ExonRegion	0	3145.31	22.37	41.66	77.58	778.02	578.78	381.00	148.51	128.07	43.32	0.00	0.00	0.00	11.37	5.13	25.15	27.68	0.00	2.94	0.00	0.00	2.08	0.00
21	ER1f	ExonRegion	0	2307.21	3.17	32.44	45.87	401.10	213.20	170.83	120.00	83.20	37.15	0.00	0.00	0.00	1.97	1.43	5.85	10.17	0.00	0.00	0.00	0.00	1.23	0.00
22	E1b_E2a	KnownJunction	0	1577.09	0.00	36.13	27.50	100.00	58.26	81.17	72.66	56.22	26.32	0.00	0.00	0.00	4.59	4.45	3.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER2a	ExonRegion	0	1050.88	4.26	52.28	51.50	110.27	71.78	72.69	112.13	112.08	41.40	0.00	2.51	0.00	5.42	2.39	11.12	28.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E2a_E3b	KnownJunction	0	267.01	2.83	47.40	52.81	51.70	34.70	27.38	145.11	115.45	48.89	0.00	12.15	0.00	4.89	4.45	7.26	36.28	0.00	0.00	0.00	0.00	0.00	0.00
25	ER3a	ExonRegion	0	8.23	0.05	1.47	1.00	3.51	0.57	0.50	3.07	2.44	1.53	0.00	0.10	0.00	0.18	1.22	2.77	7.48	0.00	0.00	0.00	0.00	0.00	0.00
26	E3_Ab	KnownBoundary	0	10.37	0.00	1.45	1.66	8.57	0.00	0.00	0.00	0.00	1.32	0.00	0.00	0.00	0.00	5.81	3.85	13.18	0.00	0.00	0.00	0.00	0.00	0.00
27	ER3b	ExonRegion	0	1862.98	1.17	73.99	85.02	151.50	36.73	36.91	197.15	169.21	65.58	0.00	6.43	0.00	19.66	13.23	35.17	59.17	0.00	0.00	0.00	0.00	0.95	0.00
28	E3_Da	KnownBoundary	0	3.63	0.00	0.00	0.00	0.00	5.45	0.00	4.39	1.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	E3a_E3d	KnownJunction	0	2806.72	0.00	91.90	121.56	190.32	30.44	32.06	202.86	215.71	59.12	0.00	18.91	0.00	4.71	16.81	37.08	50.12	0.00	0.00	0.00	0.00	3.12	0.00
30	E3a_E3e	KnownJunction	0	32.60	0.00	4.17	4.06	0.00	0.00	0.00	6.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.42	7.95	0.00	0.00	0.00	0.00	0.00	0.00
31	ER3c	ExonRegion	0	18.09	0.46	0.24	1.22	7.33	3.39	1.95	2.88	2.46	2.39	0.00	0.00	0.57	4.00	0.43	4.55	3.20	0.00	0.00	0.43	0.00	0.00	0.00
32	E3_Ac	KnownBoundary	0	30.75	0.00	1.83	0.00	4.33	0.00	1.77	2.55	3.44	0.00	0.00	6.30	12.66	2.47	0.00	15.12	20.66	0.00	0.00	0.00	0.00	0.00	0.00
33	ER3d	ExonRegion	0	698.81	1.98	3.83	10.30	75.68	15.76	24.85	37.80	8.63	3.20	0.75	9.39	11.95	144.70	29.37	169.70	243.94	1.24	0.00	0.36	0.00	0.04	1.33
34	E3_Ad	KnownBoundary	0	656.41	6.58	3.58	18.65	75.21	13.69	13.38	57.18	13.22	4.00	2.05	36.31	19.64	57.63	8.90	78.61	218.98	0.00	0.00	3.13	0.00	0.00	0.00
35	ER3e	ExonRegion	0	2010.38	7.74	103.59	145.36	243.75	60.65	44.08	255.22	218.62	84.40	0.33	66.53	8.81	70.23	14.15	101.41	214.56	1.44	0.00	1.66	0.00	3.10	0.00
36	E3_Db	KnownBoundary	0	48.01	0.00	0.00	2.06	4.33	8.69	0.00	0.00	1.79	0.00	0.00	0.00	0.00	2.41	0.00	0.00	4.77	2.53	0.00	0.00	0.00	0.00	0.00
37	E3b_E3e	KnownJunction	0	2145.64	16.25	96.18	136.61	417.91	114.25	72.16	222.21	156.83	85.69	0.00	73.52	19.32	94.71	27.44	98.52	229.83	0.00	0.00	0.00	0.00	2.45	0.00
38	ER3f	ExonRegion	0	37.90	0.00	0.00	1.37	3.09	2.45	3.20	0.00	0.73	0.00	0.00	0.00	0.00	1.59	0.15	0.78	2.07	2.58	0.83	0.56	0.00	0.00	0.00
39	E3_Dc	KnownBoundary	0	21.19	0.00	0.00	0.00	0.00	5.34	4.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.65	0.00	0.00	0.00	0.00	0.00	0.00
40	E3_Ae	KnownBoundary	0	12.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	ER3g	ExonRegion	0	414.31	3.56	28.49	36.12	84.29	43.55	22.18	58.34	52.18	21.22	0.00	17.32	3.52	23.14	7.98	24.52	64.37	0.00	0.00	0.00	0.00	0.52	0.00
42	ER3h	ExonRegion	0	609.32	12.31	107.73	116.27	625.28	289.49	252.96	233.54	191.40	93.23	0.00	77.98	33.76	192.11	51.94	233.39	327.87	0.87	1.00	0.67	0.00	1.05	0.92
43	E3_Dd	KnownBoundary	0	3.63	0.00	0.00	0.00	0.00	0.00	8.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	E3d_E3f	KnownJunction	0	2583.94	15.26	175.19	227.74	314.94	152.07	127.59	262.75	241.09	120.42	0.00	68.42	28.73	324.80	103.84	416.64	255.26	0.00	0.00	0.00	0.00	3.12	0.00
45	ER3i	ExonRegion	0	15.45	0.03	0.48	0.94	3.30	1.35	1.91	0.79	1.12	1.45	0.00	1.93	0.06	2.00	0.28	3.14	2.59	0.20	1.05	0.35	1.09	0.01	0.00
46	E3_Af	KnownBoundary	0	3.41	0.00	0.00	0.00	0.00	0.00	2.08	0.00	1.59	1.05	0.00	6.30	0.00	0.00	0.00	0.00	0.00	2.57	0.00	0.00	0.00	0.00	0.00
47	ER3j	ExonRegion	0	2857.21	9.00	69.30	89.96	405.09	93.25	100.13	142.99	118.35	62.76	1.00	72.49	36.74	127.47	36.19	153.85	315.39	0.39	0.00	0.00	0.00	0.82	0.00
48	ER3k	ExonRegion	0	94.03	0.00	2.80	1.36	1.53	3.41	3.40	4.69	3.53	2.95	0.00	0.00	2.01	4.87	0.00	6.79	7.54	0.00	0.00	0.00	0.00	0.00	0.00