Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CSNK2B Gene 0 144.44 107.73 204.70 149.48 138.54 159.99 84.42 159.60 98.97 237.45 363.99 192.72 226.84 296.23 416.07 334.70 299.36 204.96 269.94 140.61 218.95 183.86 151.39 2 375885 Transcript 0 0.84 1.41 3.31 1.20 1.92 0.54 0.52 0.51 2.19 5.33 12.37 1.06 4.14 6.96 16.34 0.30 1.70 3.16 2.84 1.47 1.29 0.62 0.29 3 375875 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 375873 Transcript 0 0.88 0.00 0.02 0.08 0.00 0.03 0.05 0.66 0.02 2.25 0.07 0.00 0.91 0.71 0.05 1.07 1.34 0.02 0.03 0.00 0.02 0.00 0.00 5 375882 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 468255 Transcript 1 38.29 23.96 33.53 47.32 64.47 75.90 28.60 49.74 41.74 67.86 35.12 24.72 16.41 46.17 24.06 39.73 29.85 46.17 36.78 33.23 23.22 33.06 32.29 7 465481 Transcript 0 14.66 12.78 7.57 8.49 11.27 6.94 7.07 7.79 5.01 4.50 4.64 7.17 9.61 11.10 11.08 11.01 12.29 5.22 1.80 5.01 2.90 5.17 4.54 8 481269 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 496869 Transcript 0 9.58 8.62 24.83 16.53 8.03 7.77 4.04 25.79 12.74 35.22 57.82 25.29 11.35 38.41 49.09 36.68 35.88 20.74 37.55 24.13 24.94 24.02 21.88 10 475875 Transcript 0 4.61 1.30 3.70 1.31 8.89 7.16 7.04 2.47 1.55 2.93 6.43 5.44 5.45 13.49 14.87 17.10 8.47 5.21 7.15 4.08 2.30 3.72 7.44 11 375880 Transcript 0 0.68 0.33 0.07 0.08 1.22 0.45 0.80 0.21 0.08 0.07 0.23 1.42 1.25 1.13 2.97 0.60 0.40 0.15 0.90 0.60 0.27 0.34 0.47 12 375865 Transcript 0 1.90 0.60 1.59 0.46 0.00 1.17 0.23 1.27 2.02 4.58 4.79 0.00 3.41 2.78 3.42 4.86 0.57 0.49 3.88 1.45 3.97 0.55 0.00 13 375866 Transcript 0 0.59 0.00 0.00 0.00 0.75 1.54 0.65 0.00 0.70 1.99 2.37 0.00 0.00 0.24 0.00 0.00 0.92 1.27 3.26 0.89 1.27 4.00 0.00 14 ER1a ExonRegion 0 1.67 2.81 2.03 2.41 0.62 1.08 1.05 1.02 1.51 6.30 15.90 2.11 1.62 4.04 7.08 0.60 3.39 3.75 1.26 2.94 2.59 1.24 0.58 15 E1a_E4a KnownJunction 0 0.00 0.00 4.58 0.00 3.23 0.00 0.00 0.00 2.86 4.35 8.84 0.00 6.66 9.89 25.59 0.00 0.00 2.57 4.42 0.00 0.00 0.00 0.00 16 ER2a ExonRegion 0 1.17 0.52 0.00 0.00 0.00 0.33 0.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E2_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.90 4.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 0.00 0.00 0.00 0.00 18 E2_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E2_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E2_Ae KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER2b ExonRegion 0 6.47 10.29 2.67 0.80 6.30 34.30 19.78 1.63 0.58 2.63 3.87 0.00 0.00 4.68 2.56 7.87 8.74 1.09 8.62 3.63 6.09 3.92 3.28 22 E2_Af KnownBoundary 0 0.00 0.00 1.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E2_Ag KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E2_Ah KnownBoundary 0 65.34 43.02 46.57 17.55 27.59 171.83 77.81 30.52 18.55 52.49 30.01 5.40 0.00 14.13 16.44 36.57 47.87 29.27 35.77 20.71 33.92 22.47 33.72 25 ER2c ExonRegion 0 44.45 72.19 14.09 8.18 37.01 173.29 103.27 9.22 5.35 19.50 26.09 0.00 0.00 17.32 36.75 55.98 67.12 4.93 53.09 20.21 27.55 27.43 26.43 26 ER2d ExonRegion 0 64.70 91.80 18.91 9.54 47.78 250.71 126.72 13.09 9.53 27.36 38.66 0.00 0.00 39.21 75.43 58.59 82.52 7.39 69.17 25.23 39.67 36.31 42.79 27 ER2e ExonRegion 0 105.83 113.88 37.68 16.35 75.59 393.35 189.99 20.74 16.67 45.59 63.79 0.00 0.00 51.57 126.93 103.28 111.41 8.78 115.47 49.47 71.07 61.98 68.28 28 ER2f ExonRegion 1 267.39 255.55 115.18 49.97 263.12 908.34 507.96 54.16 51.87 139.92 173.32 0.00 0.00 79.58 269.82 225.88 248.67 18.48 225.10 127.66 178.50 150.01 190.88 29 ER2g ExonRegion 1 359.81 321.31 160.52 69.51 329.12 1155.29 661.98 65.68 70.40 192.68 228.08 0.00 0.00 95.82 342.35 276.41 326.79 22.17 296.24 165.96 235.80 237.52 240.80 30 ER2h ExonRegion 1 480.97 318.35 317.76 147.41 302.01 1022.36 493.78 190.72 124.96 371.43 262.22 24.59 30.22 233.54 476.87 475.37 313.21 195.06 327.07 239.36 204.26 255.21 269.89 31 E2a_E4a KnownJunction 1 417.04 176.74 251.79 101.75 83.87 129.64 64.39 193.62 79.60 237.94 160.46 136.24 57.46 213.37 320.91 520.12 141.28 336.89 442.46 105.91 120.34 147.39 202.40 32 ER3a ExonRegion 0 3.80 1.21 0.46 0.92 0.00 2.35 0.46 0.00 0.79 1.52 7.43 0.00 0.00 5.56 6.85 6.22 1.13 0.98 7.76 2.89 4.86 1.11 0.00 33 E3_Ab KnownBoundary 0 14.30 2.96 1.60 2.06 0.00 4.77 2.25 2.14 1.79 3.01 11.06 0.00 0.00 0.00 4.45 22.13 4.77 2.57 20.80 11.63 11.74 3.00 0.00 34 ER3b ExonRegion 0 4.59 0.64 1.79 1.10 0.00 0.89 3.00 1.73 2.74 6.63 4.76 0.00 1.26 4.08 2.48 18.92 2.33 3.06 11.50 4.83 9.46 2.08 0.00 35 E3_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 4.42 2.55 1.79 4.35 0.00 0.00 0.00 2.47 0.00 0.00 0.00 2.40 4.42 5.75 0.00 3.12 0.00 36 E3a_E4a KnownJunction 0 0.00 0.00 2.72 0.00 0.00 0.00 0.00 2.55 3.24 7.63 2.16 0.00 6.82 0.00 0.00 3.50 0.00 0.00 0.00 0.00 3.09 0.00 0.00 37 ER3c ExonRegion 0 1.19 0.00 0.00 0.00 1.50 3.08 1.29 0.00 0.22 1.25 2.17 0.00 0.00 0.48 0.00 0.00 1.85 2.54 2.28 1.78 0.19 1.76 0.00 38 E3b_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.19 2.74 2.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.24 0.00 2.35 6.25 0.00 39 ER4a ExonRegion 0 220.70 167.49 555.39 254.56 97.58 116.92 60.26 467.29 255.28 691.17 1102.99 290.18 227.95 603.84 908.86 762.55 822.12 404.75 699.44 454.32 649.30 360.02 368.07 40 E4_Da KnownBoundary 0 0.00 0.00 5.41 0.00 0.00 2.90 2.25 4.03 1.77 2.98 5.11 0.00 13.15 2.41 8.90 0.00 0.00 4.35 13.74 0.00 0.00 0.00 8.71 41 E4a_E5a KnownJunction 0 0.00 0.00 0.00 3.23 0.00 0.00 0.00 5.09 1.30 1.50 4.95 0.00 0.00 4.41 0.00 0.00 0.00 2.20 0.00 0.00 0.00 0.00 4.35 42 E4a_E5b KnownJunction 0 325.39 308.83 1124.86 608.65 251.78 248.61 135.58 943.68 476.88 1391.91 1768.18 702.08 521.23 1170.06 1875.65 1357.85 1272.18 731.65 1665.27 967.13 902.26 931.67 671.38 43 ER4b ExonRegion 0 4.61 1.30 3.70 1.31 8.89 7.16 7.04 2.47 1.55 2.93 6.43 5.44 5.45 13.49 14.87 17.10 8.47 5.21 7.15 4.08 2.30 3.72 7.44 44 E4_Db NovelBoundary 0 2501.70 2270.25 839.71 1006.60 2470.04 1634.91 3021.17 1001.84 936.19 851.69 1283.48 394.78 610.35 362.71 672.85 2423.30 2377.00 1340.64 2184.63 2904.21 1836.39 1299.62 2332.97 45 ER5a ExonRegion 0 19.16 17.23 49.66 29.84 16.05 15.54 8.08 46.49 24.18 68.93 110.68 50.59 22.71 72.40 98.18 73.36 71.75 39.29 75.11 48.26 49.87 48.03 39.41 46 ER5b ExonRegion 0 863.41 377.65 990.09 617.96 605.03 490.54 204.62 786.99 463.23 1165.96 1883.02 1013.77 753.90 1388.35 1973.19 1614.07 1315.86 1106.93 1108.76 709.03 1017.03 795.31 770.49 47 E5_Da KnownBoundary 0 13.41 11.97 10.91 6.83 10.61 5.56 4.15 6.61 9.00 0.00 2.37 6.15 6.49 2.47 18.42 7.69 3.93 4.52 0.00 3.26 0.00 9.92 8.71 48 E5a_E6a KnownJunction 0 2152.46 566.87 1198.04 910.11 2015.62 1522.53 395.08 877.92 567.27 1092.80 1844.52 1314.88 1246.02 1506.34 2098.53 2264.11 1434.78 1509.19 1597.32 711.33 1155.73 788.26 951.88 49 ER5c ExonRegion 0 14.66 12.78 7.57 8.49 11.27 6.94 7.07 7.79 5.01 4.50 4.64 7.17 9.61 11.10 11.08 11.01 12.29 5.22 1.80 5.01 2.90 5.17 4.54 50 ER6a ExonRegion 0 982.79 971.03 1570.76 1107.60 1122.11 1715.96 839.23 1202.78 729.30 1749.54 2775.04 1493.26 1313.73 1993.89 2909.38 2130.60 2111.07 1468.71 1687.72 1050.79 1677.57 1149.96 909.47 51 E6_Da KnownBoundary 0 42.90 14.14 24.48 27.30 14.35 49.97 20.89 48.43 27.81 45.69 14.21 6.30 13.15 30.31 4.45 28.88 16.74 30.92 27.20 42.89 34.90 38.21 28.00 52 E6a_E6b KnownJunction 0 656.93 1497.23 1462.34 1006.83 768.00 1290.68 896.19 1066.36 700.34 1572.02 2861.94 1979.45 1454.77 2500.16 3175.98 1652.99 2350.35 1203.39 1223.38 1065.56 1788.95 1109.31 741.46 53 ER6b ExonRegion 0 48.47 15.85 41.56 42.10 48.86 72.04 24.21 40.19 26.84 57.35 39.12 25.08 18.50 44.73 25.34 45.01 32.32 46.42 34.61 25.41 22.83 35.80 32.08 54 E6_Ab KnownBoundary 0 75.05 18.62 36.49 53.64 45.42 125.38 21.68 48.43 28.53 51.52 19.53 12.60 13.15 41.67 32.26 36.91 33.19 46.51 24.75 20.07 33.05 47.58 16.13 55 ER6c ExonRegion 0 696.76 724.82 1546.29 1112.95 839.86 1085.05 623.55 1169.98 700.26 1742.45 2755.00 1569.75 1478.05 2271.32 3085.58 1703.50 2227.71 1469.65 1304.09 939.74 1744.54 1108.77 816.50 56 E6_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 E6b_E6c KnownJunction 0 894.38 591.67 2093.75 1510.46 781.92 643.38 267.71 1333.72 804.53 1906.15 2439.41 1462.53 2386.69 2063.52 2835.04 1601.12 2040.58 1882.23 1212.18 857.32 1579.96 948.75 690.84 58 E6b_E7a NovelJunction 0 0.00 2.96 19.96 6.53 0.00 0.00 0.00 0.00 4.48 4.84 2.58 0.00 0.00 0.00 0.00 3.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 E6b_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60 ER6d ExonRegion 0 191.71 50.12 144.79 122.39 117.57 145.37 65.23 122.24 86.40 190.25 144.88 88.36 74.59 171.83 185.13 213.91 140.48 163.78 120.07 115.26 117.95 114.93 123.60 61 E6_Ac KnownBoundary 0 175.07 37.43 152.69 126.19 112.22 100.23 58.74 150.78 75.81 183.49 121.56 74.27 74.67 140.50 181.59 199.86 90.88 183.43 87.44 97.28 115.15 107.40 96.63 62 ER6e ExonRegion 0 597.60 597.35 1874.72 1488.00 707.74 576.57 380.73 1411.74 867.02 2014.63 3420.54 1789.95 2296.01 2827.96 4127.40 3633.64 2781.84 2449.68 3047.58 1307.74 1934.11 1868.97 1573.51 63 E6_Dc KnownBoundary 1 395.03 456.37 1526.56 895.19 982.51 685.40 331.09 1200.43 729.04 1864.81 3950.00 1218.55 1597.78 1912.84 2597.94 1554.38 3687.14 1174.33 1231.94 980.55 2300.16 889.29 702.71 64 ER6f ExonRegion 0 228.05 317.33 1067.24 692.25 551.81 389.22 187.97 899.07 530.90 1379.34 2330.02 992.33 1672.85 1578.24 1988.55 1174.12 1953.98 914.51 775.71 693.57 1506.44 564.49 540.48 65 E6d_E7a KnownJunction 0 242.56 316.59 918.54 642.61 376.74 360.81 150.90 697.07 400.20 1032.68 1495.12 1071.20 2181.51 1411.98 1946.60 990.51 1013.00 685.97 688.02 572.12 937.72 409.41 476.41 66 E6d_E8a NovelJunction 0 0.00 0.00 0.00 0.00 3.48 0.00 1.77 0.00 0.00 1.29 4.79 19.81 0.00 5.89 4.45 0.00 4.39 0.00 0.00 0.00 0.00 0.00 0.00 67 E6d_E9a KnownJunction 0 0.00 8.88 17.39 20.61 21.22 0.00 8.35 22.51 5.15 46.44 7.42 0.00 0.00 14.54 10.75 3.67 0.00 20.52 17.41 13.68 0.00 5.82 4.10 68 Ix_AR1 ActiveIntronRegion 0 9.88 11.86 11.03 12.27 30.33 26.59 18.98 10.37 12.35 19.50 13.85 15.15 4.69 32.48 11.61 20.80 19.81 7.39 9.56 16.31 12.49 17.36 7.83 69 ER7a ExonRegion 0 980.82 628.92 707.86 546.57 830.15 666.46 387.97 534.66 344.03 830.93 1339.19 834.33 1406.17 1295.68 1813.60 1528.27 1272.64 477.36 1338.68 447.68 849.77 928.36 635.58 70 E7_Da KnownBoundary 1 68.75 62.82 41.07 90.93 230.56 195.00 73.31 116.36 88.48 130.68 48.54 85.53 41.72 93.59 45.74 39.14 74.33 100.57 64.19 55.10 57.58 54.07 49.51 71 ER7b ExonRegion 0 28.10 32.07 25.50 52.54 80.08 79.77 32.98 59.28 56.64 78.37 31.12 24.36 14.33 47.61 22.77 34.46 27.37 45.91 38.94 41.04 23.62 30.31 32.49 72 E7_Db NovelBoundary 0 169.29 143.53 77.35 119.10 277.76 250.14 103.74 190.91 125.00 137.80 79.86 70.22 34.58 67.75 82.21 69.55 64.42 74.04 64.75 117.74 40.22 75.75 61.29 73 ER8a ExonRegion 0 2.65 0.00 0.07 0.23 0.00 0.10 0.15 1.97 0.07 6.75 0.21 0.00 2.74 2.12 0.16 3.22 4.03 0.05 0.09 0.00 0.06 0.00 0.00 74 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 75 ER9a ExonRegion 0 0.23 5.11 20.05 15.42 4.72 2.56 5.41 8.67 4.21 25.39 4.78 12.75 0.81 12.99 3.15 3.63 5.25 17.82 5.12 6.84 0.07 1.97 0.44 76 E9b_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 77 ER9b ExonRegion 0 0.00 2.03 10.42 16.35 2.68 3.67 5.30 6.91 3.71 16.06 5.80 12.99 0.00 9.74 2.90 0.00 0.00 14.78 15.93 4.26 0.00 0.00 0.00 78 ER10a ExonRegion 0 2.06 7.25 1.48 1.95 2.79 1.68 5.67 1.50 0.83 1.21 0.42 0.51 1.34 0.94 1.16 0.00 0.00 1.00 2.35 0.44 0.00 0.00 0.00 79 E10_Da KnownBoundary 0 94.83 37.36 9.31 23.87 43.72 26.86 8.61 15.20 11.26 16.12 6.48 0.00 0.00 4.77 5.07 19.99 21.22 11.57 20.89 0.00 7.78 2.94 11.61 80 ER10b ExonRegion 0 0.68 0.33 0.07 0.08 1.22 0.45 0.80 0.21 0.08 0.07 0.23 1.42 1.25 1.13 2.97 0.60 0.40 0.15 0.90 0.60 0.27 0.34 0.47