Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 XXbac-BPG246D15.6 Gene 0 251.25 1.75 10.46 17.10 81.77 53.50 14.05 26.53 22.33 2.59 75.79 85.11 51.73 169.35 192.47 171.56 131.94 0.00 0.08 0.17 4.78 13.40 5.14 2 453426 Transcript 0 105.66 1.04 6.03 7.93 47.85 17.91 5.33 12.75 12.17 1.27 36.07 77.11 36.85 77.07 79.53 60.53 86.84 0.00 0.19 0.38 2.51 7.59 0.87 3 458296 Transcript 0 89.02 0.00 0.00 0.88 48.22 47.16 5.52 3.43 0.00 0.00 35.56 3.08 3.25 67.04 52.78 79.94 60.45 0.00 0.00 0.00 0.00 0.00 2.18 4 413039 Transcript 0 0.00 0.00 0.00 1.56 0.00 2.90 0.00 0.00 0.00 0.00 21.79 0.00 0.00 9.48 10.75 3.25 25.90 0.00 0.00 0.00 3.15 0.00 0.00 5 429600 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 7.86 8.79 0.00 0.00 0.00 0.00 0.00 0.00 6 412095 Transcript 0 8.11 0.00 0.94 1.07 5.10 11.00 3.56 1.19 1.57 1.00 6.07 5.43 6.67 19.01 20.32 33.03 12.53 0.00 0.00 0.00 1.30 2.15 0.51 7 415067 Transcript 1 3.56 0.00 0.00 1.63 3.57 0.00 0.00 4.19 4.43 0.00 23.80 0.00 0.00 7.18 21.88 0.00 77.33 0.00 0.00 0.00 13.84 2.45 0.00 8 ER1a ExonRegion 0 7.36 0.00 0.11 0.00 3.14 2.07 0.29 0.00 0.86 0.00 2.69 0.00 0.00 2.82 6.43 1.55 3.44 0.00 0.00 0.00 1.15 1.81 0.51 9 E1_Ac KnownBoundary 0 25.56 0.00 0.00 0.00 8.15 5.68 0.00 0.00 1.62 0.00 2.05 0.00 0.00 2.24 4.70 0.00 9.26 0.00 0.00 0.00 3.09 2.39 0.00 10 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1_Ae KnownBoundary 1 188.70 0.00 1.83 0.00 56.88 20.84 14.88 4.52 8.13 0.00 65.28 0.00 0.00 70.69 95.56 104.25 136.51 0.00 0.00 0.00 12.73 8.51 8.45 12 ER1b ExonRegion 0 98.29 0.00 1.23 1.31 43.13 22.37 5.77 0.00 4.84 0.00 43.30 7.10 4.69 66.72 68.01 67.88 94.80 0.00 0.00 0.00 9.78 13.25 13.16 13 ER1c ExonRegion 1 279.38 0.00 1.23 1.36 85.62 45.84 15.89 1.73 6.18 0.00 98.58 8.66 4.69 173.78 176.98 172.38 207.96 0.00 0.00 0.00 19.83 20.84 14.68 14 ER1d ExonRegion 1 312.19 0.00 3.37 2.39 87.63 52.72 20.19 1.73 7.10 0.00 104.38 8.66 4.69 190.02 216.14 198.39 259.95 0.00 0.00 0.00 23.14 23.96 14.68 15 ER1e ExonRegion 0 174.27 0.00 4.14 1.81 33.82 32.68 10.29 4.42 13.24 2.04 67.42 17.32 11.83 91.63 114.92 145.26 179.32 0.00 0.00 0.00 13.95 11.18 7.99 16 E1_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E1a_E1f KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 3.59 3.65 0.00 0.00 0.00 0.00 0.00 0.00 18 E1a_E1g KnownJunction 0 0.00 0.00 0.00 1.56 0.00 2.90 0.00 0.00 0.00 0.00 21.79 0.00 0.00 9.48 10.75 3.25 25.90 0.00 0.00 0.00 3.15 0.00 0.00 19 E1a_E1h KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 7.86 8.79 0.00 0.00 0.00 0.00 0.00 0.00 20 E1a_E2a KnownJunction 1 3.56 0.00 0.00 1.63 3.57 0.00 0.00 4.19 4.43 0.00 23.80 0.00 0.00 7.18 21.88 0.00 77.33 0.00 0.00 0.00 13.84 2.45 0.00 21 E1a_E2b KnownJunction 1 6.96 0.00 1.77 0.00 0.00 2.90 0.00 1.64 8.19 0.00 32.80 20.11 0.00 28.78 30.04 31.27 158.58 0.00 0.00 0.00 3.21 5.57 0.00 22 ER1f ExonRegion 0 8.11 0.00 0.94 1.07 5.10 11.00 3.56 1.19 1.57 1.00 6.07 5.43 6.67 19.01 20.32 33.03 12.53 0.00 0.00 0.00 1.30 2.15 0.51 23 E1_Af KnownBoundary 0 167.36 0.00 3.78 4.13 7.98 30.89 0.00 2.55 0.00 1.67 22.11 5.85 6.49 46.68 22.62 31.27 22.07 0.00 0.00 0.00 6.24 2.51 0.00 24 ER1g ExonRegion 0 64.23 0.00 2.29 3.83 0.61 1.27 0.00 2.60 0.97 0.75 12.37 0.40 3.50 27.59 12.03 33.29 15.40 0.00 0.00 0.00 1.53 0.33 0.00 25 E1_Ag KnownBoundary 0 24.89 0.00 0.00 0.00 0.00 12.89 0.00 2.01 1.45 0.00 14.00 0.00 8.28 11.42 0.00 15.47 16.55 0.00 0.00 0.00 0.00 0.00 0.00 26 ER1h ExonRegion 0 39.25 0.00 2.35 5.10 12.41 8.55 2.53 6.07 3.88 1.25 25.67 13.54 12.25 81.70 61.26 84.05 32.73 0.00 0.00 0.00 3.01 1.79 1.82 27 E1_Ah KnownBoundary 1 41.34 0.00 0.00 4.89 26.49 4.54 5.61 2.38 7.06 1.67 29.64 24.91 25.49 77.29 62.67 67.85 17.77 0.00 0.00 0.00 0.00 0.00 0.00 28 ER1i ExonRegion 1 179.20 0.44 2.14 4.36 62.43 96.21 10.28 11.84 5.76 1.64 92.52 15.37 13.60 154.35 165.27 206.51 125.38 0.00 0.00 0.00 1.87 5.66 5.78 29 E1b_E2a KnownJunction 0 178.03 0.00 0.00 1.76 96.43 94.32 11.04 6.86 0.00 0.00 71.12 6.15 6.49 131.62 105.57 156.28 117.25 0.00 0.00 0.00 0.00 0.00 4.35 30 E1b_E2b KnownJunction 1 483.57 2.89 4.08 5.06 121.73 116.64 23.32 19.43 9.58 1.42 173.68 6.90 6.98 227.85 347.24 428.95 212.25 0.00 0.00 0.00 0.00 11.51 0.00 31 Ix Intron 0 85.27 0.61 0.83 2.15 24.22 14.39 4.20 3.50 2.50 0.52 10.21 21.94 15.40 50.58 30.36 57.85 30.38 0.00 0.00 0.00 0.67 1.89 0.89 32 Ix_SR1 SilentIntronRegion 0 51.06 0.00 0.23 1.19 12.64 13.37 2.64 3.18 0.74 0.37 7.53 15.21 7.97 47.19 33.43 56.86 29.56 0.00 0.00 0.00 0.99 0.94 0.16 33 Ix_AR2 ActiveIntronRegion 0 139.18 1.30 1.60 3.70 37.95 18.94 6.41 4.75 4.78 0.55 13.46 35.07 25.96 60.70 34.38 77.99 40.61 0.00 0.00 0.00 0.71 2.74 1.77 34 E2_Aa NovelBoundary 0 685.68 0.00 76.11 76.91 169.86 118.28 15.46 157.11 121.84 22.59 240.64 326.36 236.51 694.51 894.00 646.84 515.19 0.00 0.00 0.00 66.97 98.71 42.85 35 ER2a ExonRegion 1 165.68 0.02 1.18 2.17 17.56 26.93 2.01 5.40 4.25 0.19 35.07 3.02 1.69 43.30 52.26 80.68 73.55 0.00 0.00 0.00 4.66 4.66 8.71 36 E2_Ab KnownBoundary 0 544.17 6.71 57.57 23.64 12.31 13.86 0.00 57.75 73.93 4.97 125.98 144.95 88.79 371.54 439.58 268.56 395.14 0.00 0.00 0.00 45.65 31.41 24.67 37 ER2b ExonRegion 0 252.37 1.39 6.99 7.77 48.29 66.42 12.63 17.84 14.81 1.76 71.35 33.17 21.03 161.88 205.55 229.10 143.36 0.00 0.00 0.00 4.13 13.07 5.56 38 E2_Da KnownBoundary 0 758.65 3.35 41.16 31.90 111.38 195.00 58.69 96.73 76.88 15.28 157.88 182.91 192.36 675.38 1005.26 491.41 352.03 0.00 0.00 0.00 72.71 48.25 28.08 39 ER2c ExonRegion 0 382.90 1.57 16.61 26.49 71.73 91.94 18.56 38.40 45.02 5.11 119.12 48.67 47.92 319.06 354.37 264.02 245.49 0.00 0.00 0.00 7.57 14.87 8.67 40 E2_Db KnownBoundary 0 522.24 5.72 18.30 21.14 118.00 71.38 29.77 38.32 43.49 0.00 140.61 94.38 72.56 339.93 398.17 287.79 260.21 0.00 0.00 0.00 3.15 20.82 16.22 41 ER2d ExonRegion 0 614.14 7.33 29.36 44.24 180.80 96.42 30.33 58.75 55.62 3.89 178.59 98.23 98.91 412.70 483.61 372.05 334.89 0.00 0.00 0.00 9.88 29.46 12.54 42 E2_Dc KnownBoundary 0 975.58 9.08 24.87 61.10 247.28 147.64 44.25 75.21 60.91 5.18 133.77 249.68 121.91 332.10 413.50 450.82 296.40 0.00 0.00 0.00 5.93 31.11 12.89 43 ER2e ExonRegion 0 622.35 1.48 24.67 55.86 191.66 118.76 26.64 80.96 60.44 5.25 181.46 256.00 155.99 361.30 442.38 347.51 278.75 0.00 0.00 0.00 7.19 30.28 10.05 44 E2_Dd KnownBoundary 0 590.33 0.00 26.55 40.89 328.95 115.62 27.73 88.80 39.90 5.96 133.40 262.14 169.79 289.25 405.46 223.70 252.92 0.00 0.00 0.00 0.00 22.84 0.00 45 ER2f ExonRegion 1 452.08 4.24 22.21 48.59 260.07 116.81 43.28 83.48 55.43 5.80 148.73 326.09 150.05 284.32 344.39 256.32 190.93 0.00 0.00 0.00 1.75 36.82 5.56 46 E2_De KnownBoundary 1 475.94 12.83 23.48 40.29 314.69 127.26 50.08 72.82 39.03 8.60 96.76 328.31 250.31 218.32 285.19 183.88 186.16 0.00 0.00 0.00 0.00 14.45 0.00 47 ER2g ExonRegion 1 302.65 3.13 16.20 23.80 140.41 48.75 15.69 36.59 27.48 3.80 72.72 211.22 110.55 199.59 202.12 148.77 98.51 0.00 0.57 1.14 3.15 15.39 2.09