Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DAXX Gene 0 177.98 119.65 192.52 76.25 149.06 134.21 93.54 139.35 74.23 302.17 232.60 87.09 64.34 215.31 221.62 236.15 194.04 246.34 204.07 169.11 164.85 185.13 125.56 2 494082 Transcript 0 0.89 0.15 0.79 0.15 0.30 0.00 0.19 0.18 0.45 0.61 0.28 0.57 0.00 0.12 0.00 0.43 0.00 0.33 0.00 0.46 0.00 0.00 0.00 3 453407 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.40 0.00 0.00 0.00 0.00 0.00 4 374542 Transcript 0 0.00 0.00 0.00 0.00 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.00 5 266000 Transcript 0 22.45 15.98 16.32 7.23 11.80 22.94 31.75 21.32 8.54 43.97 6.90 24.31 6.66 12.42 4.45 16.66 21.41 25.16 13.55 23.97 13.90 8.76 7.43 6 498030 Transcript 0 3.23 0.00 1.87 2.52 1.59 4.58 2.57 4.87 1.69 3.14 5.91 3.37 1.82 2.48 4.06 8.37 3.67 2.19 0.27 1.65 0.71 5.81 4.84 7 446403 Transcript 0 4.27 0.35 1.68 1.28 1.00 2.32 3.66 1.65 1.66 3.94 3.32 1.29 0.73 1.78 1.54 0.33 2.68 6.06 4.98 1.66 1.62 6.54 0.23 8 468536 Transcript 0 7.56 0.00 0.00 1.86 0.00 0.00 0.00 0.00 0.00 7.28 0.00 12.60 0.00 2.41 0.00 0.00 0.00 6.22 0.00 0.00 0.00 0.00 0.00 9 477370 Transcript 0 0.00 0.00 1.63 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 446511 Transcript 0 1.83 1.81 1.87 0.30 1.95 1.07 0.57 2.00 0.00 2.31 10.27 0.53 1.69 4.26 2.64 1.30 3.83 0.40 5.11 0.63 0.64 0.91 3.01 11 477162 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.76 0.00 12 490173 Transcript 0 57.97 8.12 19.46 5.00 21.49 18.31 16.18 21.86 11.73 16.46 19.21 9.77 15.63 34.04 29.81 39.19 16.69 34.47 11.88 12.06 11.63 25.87 15.21 13 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.31 0.00 0.00 0.00 0.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER1b ExonRegion 0 0.03 0.00 0.00 0.00 2.15 0.00 0.00 0.00 0.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.00 0.00 0.00 16 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER2a ExonRegion 0 1.87 0.03 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.00 0.00 0.05 0.00 0.00 0.00 1.36 5.15 0.00 0.04 0.00 0.00 18 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E2a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.40 0.00 0.00 0.00 0.00 0.00 20 ER3a ExonRegion 0 2.68 0.44 2.36 0.44 0.58 0.00 0.57 0.55 0.40 1.84 0.83 1.70 0.00 0.35 0.00 1.28 0.00 0.99 0.00 1.37 0.00 0.00 0.00 21 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.00 22 ER4b ExonRegion 0 7.71 0.23 0.07 1.36 4.54 6.71 0.35 0.10 0.21 1.17 0.22 0.00 0.97 3.52 1.53 7.51 3.05 2.72 3.19 0.16 1.33 2.95 9.81 23 E4_Ac KnownBoundary 0 3.48 0.00 0.00 1.93 6.37 4.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.41 4.45 15.89 0.00 2.11 0.00 0.00 3.03 3.12 4.35 24 E4_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.82 0.00 0.00 0.00 0.00 2.49 0.00 0.00 0.00 0.00 4.01 25 E4_Ae KnownBoundary 1 71.35 33.28 0.00 2.00 8.66 68.82 51.54 0.00 0.00 4.35 60.96 0.00 5.84 14.24 62.43 181.23 50.96 11.11 99.30 26.08 15.69 55.11 42.43 26 ER4c ExonRegion 1 42.68 16.27 7.15 5.34 8.47 47.53 27.80 4.90 7.82 30.49 35.92 0.00 16.02 20.17 73.26 117.15 26.68 24.48 63.97 20.04 11.75 29.52 29.61 27 E4_Af KnownBoundary 1 497.35 285.02 97.19 74.75 395.08 550.08 319.16 103.42 76.62 332.69 688.86 30.31 32.14 426.87 465.05 992.82 539.69 479.78 1547.90 412.91 273.18 477.62 681.88 28 ER4d ExonRegion 1 167.77 88.80 38.48 34.07 94.19 202.82 97.18 38.37 31.45 143.21 261.33 0.00 23.14 144.44 284.32 436.90 177.81 152.25 538.54 127.09 96.67 159.32 239.63 29 ER4e ExonRegion 1 300.90 189.29 70.25 55.88 253.30 380.82 226.95 67.84 60.42 262.64 508.51 6.85 28.92 344.99 496.60 752.69 415.64 270.70 1088.60 303.19 214.49 368.61 478.43 30 ER4f ExonRegion 1 221.55 149.29 93.72 64.37 207.42 296.13 203.61 91.15 73.07 332.21 360.83 31.62 16.58 207.39 213.09 455.16 362.10 288.05 748.28 250.46 185.51 268.14 309.40 31 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 E4a_E6b KnownJunction 0 54.31 14.34 39.35 17.15 27.84 52.75 42.66 39.18 22.95 138.93 47.22 62.87 6.17 27.25 25.71 27.94 35.06 57.50 44.99 44.42 32.99 17.39 19.29 33 E4a_E6c KnownJunction 0 22.45 15.98 16.32 7.23 11.80 22.94 31.75 21.32 8.54 43.97 6.90 24.31 6.66 12.42 4.45 16.66 21.41 25.16 13.55 23.97 13.90 8.76 7.43 34 E4a_E7a KnownJunction 0 0.00 0.00 1.63 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 E4a_E8a KnownJunction 0 7.56 0.00 0.00 1.86 0.00 0.00 0.00 0.00 0.00 7.28 0.00 12.60 0.00 2.41 0.00 0.00 0.00 6.22 0.00 0.00 0.00 0.00 0.00 36 ER5a ExonRegion 0 3.66 0.26 2.59 0.59 3.90 2.14 1.15 1.74 0.00 3.41 5.27 1.06 3.38 8.52 5.27 2.60 7.66 0.80 10.21 1.26 1.28 1.82 6.02 37 E5a_E6b KnownJunction 0 0.00 3.35 1.15 0.00 0.00 0.00 0.00 2.26 0.00 1.21 15.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER6a ExonRegion 0 8.53 0.70 3.37 2.56 2.01 4.64 7.32 3.29 3.32 7.88 6.64 2.57 1.47 3.55 3.08 0.65 5.36 12.13 9.95 3.32 3.24 13.09 0.46 39 E6_Ac KnownBoundary 0 7.26 0.00 2.87 3.46 10.95 0.00 6.76 6.49 4.31 3.95 4.58 6.15 6.33 0.00 5.19 0.00 0.00 6.18 4.80 5.69 5.50 0.00 0.00 40 ER6b ExonRegion 1 64.91 27.11 59.23 25.44 32.11 59.90 56.93 53.58 34.58 164.39 74.09 63.50 20.32 32.48 35.78 28.73 55.01 104.09 60.52 61.70 56.56 41.67 20.56 41 ER6c ExonRegion 1 62.37 26.57 74.39 31.52 26.73 32.17 27.61 76.91 51.15 241.52 275.93 57.19 27.16 110.25 105.08 166.64 245.56 150.72 258.80 161.58 161.27 103.50 112.29 42 E6_Ad KnownBoundary 1 67.79 20.46 148.34 71.45 19.19 23.85 23.23 149.92 74.59 425.95 375.73 123.19 20.45 339.28 421.04 842.34 395.14 406.62 1553.36 402.04 232.10 481.85 555.29 43 ER6d ExonRegion 0 34.72 44.48 111.06 47.42 33.40 42.51 25.09 102.32 58.60 276.19 179.23 66.29 27.17 262.86 284.72 422.08 182.73 301.03 504.09 200.15 133.03 251.44 256.30 44 E6_Da KnownBoundary 0 39.34 58.81 123.41 39.99 97.03 127.54 50.61 124.37 62.27 288.60 191.05 53.57 35.06 219.38 125.47 178.50 191.12 318.61 134.03 135.89 140.79 89.65 92.53 45 ER6e ExonRegion 0 50.12 80.67 100.09 35.95 278.83 296.11 136.16 128.48 61.78 322.75 278.12 46.80 51.81 228.15 148.61 200.26 234.94 285.26 126.30 159.68 173.57 104.54 97.52 46 E6_Db KnownBoundary 0 0.00 0.00 4.79 1.96 8.23 17.32 8.48 4.97 0.00 4.24 6.00 0.00 0.00 7.06 0.00 31.96 13.37 6.96 3.76 3.13 2.90 6.25 17.41 47 E6b_E7a KnownJunction 0 74.01 105.11 110.37 40.62 455.26 522.09 351.76 140.76 69.01 378.03 325.77 73.82 84.41 219.61 245.87 233.36 236.56 318.49 130.45 200.51 191.76 130.67 119.34 48 E6b_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.76 0.00 49 ER6f ExonRegion 0 3.23 0.00 1.87 2.52 1.59 4.58 2.57 4.87 1.69 3.14 5.91 3.37 1.82 2.48 4.06 8.37 3.67 2.19 0.27 1.65 0.71 5.81 4.84 50 ER7a ExonRegion 0 101.16 152.59 172.33 66.29 116.54 150.30 117.11 181.04 84.99 411.54 256.02 89.71 57.52 276.77 197.46 222.73 262.22 271.11 173.76 197.81 209.13 157.43 98.02 51 E7_Da KnownBoundary 1 169.36 174.77 228.91 86.37 126.06 116.75 112.35 178.38 80.00 440.59 262.49 111.64 25.97 246.34 216.58 235.49 232.44 350.65 115.67 258.10 186.07 147.21 94.84 52 ER7b ExonRegion 0 165.73 167.05 258.14 99.64 141.48 167.72 114.76 188.37 85.89 424.62 233.21 80.45 71.76 296.08 202.29 283.55 230.61 248.61 184.29 216.28 213.31 153.47 120.52 53 E7_Db KnownBoundary 0 188.11 209.70 271.93 108.58 156.88 149.40 131.91 167.58 98.00 438.17 205.05 79.83 52.76 286.07 229.56 229.43 216.46 343.48 154.55 222.30 216.16 123.81 119.85 54 ER7c ExonRegion 0 110.98 147.52 260.66 91.78 103.79 144.98 92.43 155.08 99.39 420.42 269.67 72.82 60.92 300.02 269.50 246.48 244.44 316.80 190.91 236.57 201.24 160.50 115.50 55 E7_Dc KnownBoundary 0 207.30 165.69 253.57 77.68 183.79 129.93 78.74 153.86 105.67 369.49 292.07 71.72 40.26 192.77 305.21 192.94 245.54 361.89 226.45 201.21 234.69 141.63 120.62 56 ER7d ExonRegion 0 196.85 144.87 243.13 80.64 146.24 165.26 92.59 147.62 87.27 386.20 262.61 66.63 64.53 286.96 278.15 274.98 235.21 376.12 204.10 231.31 195.96 165.90 123.01 57 E7d_E8a KnownJunction 0 300.57 161.62 305.87 94.06 163.33 203.58 121.49 211.37 114.67 417.17 243.11 48.62 49.02 310.08 326.23 269.42 199.81 348.62 281.61 199.74 162.17 259.14 63.00 58 ER8a ExonRegion 0 292.46 185.69 318.80 113.24 248.18 209.66 164.28 210.52 102.18 415.21 307.07 82.75 64.99 278.60 249.62 278.01 210.36 341.54 216.94 234.78 188.95 175.24 134.75 59 E8_Ab KnownBoundary 0 393.25 237.06 434.43 178.63 652.46 332.59 319.16 305.06 157.93 563.89 276.49 78.48 47.40 364.00 276.04 338.71 227.30 444.84 356.34 224.92 208.19 208.93 135.81 60 ER8b ExonRegion 0 271.05 192.25 362.92 139.49 378.25 255.31 199.37 264.78 123.71 493.63 356.38 117.44 126.57 354.83 322.40 354.98 220.05 541.18 351.35 243.94 258.85 290.39 204.13 61 E8_Da KnownBoundary 0 53.05 3.29 25.49 6.83 28.52 21.01 20.45 15.32 11.95 19.58 28.53 0.00 18.51 21.90 24.60 11.36 35.44 27.77 13.37 6.52 15.14 36.01 31.33 62 E8a_E8c KnownJunction 0 211.96 175.10 359.69 139.24 196.35 200.28 139.25 230.88 96.35 420.63 278.60 122.14 111.68 341.87 339.58 454.33 201.87 614.63 189.37 236.75 209.24 216.64 264.88 63 ER8c ExonRegion 0 57.97 8.12 19.46 5.00 21.49 18.31 16.18 21.86 11.73 16.46 19.21 9.77 15.63 34.04 29.81 39.19 16.69 34.47 11.88 12.06 11.63 25.87 15.21 64 E8_Ac KnownBoundary 0 76.83 0.00 17.15 2.06 27.67 36.85 9.45 19.67 8.77 19.66 26.01 43.81 13.80 29.73 27.44 61.78 12.62 31.21 18.07 14.57 8.28 17.51 23.99 65 ER8d ExonRegion 0 294.57 218.16 312.47 120.58 282.57 255.69 179.66 205.65 113.28 431.29 386.87 155.88 148.17 375.56 349.36 399.93 326.32 448.31 336.78 280.78 290.08 327.23 222.11 66 E8b_E9a KnownJunction 0 1123.98 460.31 527.42 210.50 696.77 636.91 341.33 336.07 201.59 801.35 684.07 237.83 216.22 418.98 640.71 1012.55 672.56 819.45 702.89 542.53 425.15 800.08 473.08 67 ER9a ExonRegion 0 658.86 282.54 439.09 189.85 369.55 277.84 235.64 309.62 160.07 633.41 525.03 284.18 188.53 426.82 427.93 523.58 405.32 532.37 476.95 370.91 389.60 473.41 275.15 68 E9_Da KnownBoundary 1 1010.85 293.04 460.27 203.70 401.10 299.94 317.22 353.48 173.44 646.78 443.80 365.22 113.14 460.30 541.69 508.41 408.98 521.28 371.96 392.96 405.26 559.37 224.68 69 ER9b ExonRegion 0 497.62 293.35 444.41 183.25 375.59 307.45 225.38 345.47 168.34 651.63 566.54 303.01 134.76 456.21 430.93 462.86 427.45 542.72 385.31 348.10 379.99 459.75 251.73 70 E9_Db KnownBoundary 0 366.81 481.03 445.76 168.21 376.57 316.18 197.80 276.84 153.24 548.60 468.07 294.40 184.40 427.93 480.50 375.37 235.90 401.85 312.67 326.94 312.90 401.51 276.24 71 ER9c ExonRegion 0 257.12 387.51 428.76 164.96 391.84 380.90 227.16 249.60 161.11 555.23 432.08 277.67 169.02 422.30 407.57 505.95 279.50 520.99 291.83 310.06 315.26 406.93 264.47 72 E9_Dc KnownBoundary 0 412.59 388.42 449.66 179.60 599.07 549.40 391.59 258.68 152.98 581.67 417.63 211.87 220.93 509.98 523.52 694.18 416.74 568.45 418.74 369.76 370.85 604.07 374.40 73 ER9d ExonRegion 0 310.41 219.83 439.52 179.42 422.37 289.96 217.46 323.81 160.21 604.01 467.27 220.69 172.03 456.00 542.86 599.73 388.58 548.62 412.70 303.53 309.37 495.47 340.55 74 E9_Dd NovelBoundary 0 44.67 8.68 20.05 12.99 51.53 12.27 13.87 24.85 8.83 23.05 10.16 0.00 28.57 9.54 24.11 44.09 13.18 21.85 23.34 17.45 5.93 8.57 10.33 75 E9d_E10a KnownJunction 0 361.40 214.37 610.68 239.10 315.20 197.78 159.65 492.44 203.93 777.28 516.34 169.11 139.76 622.29 914.89 591.38 467.98 644.93 1024.31 367.52 356.02 802.53 346.83 76 ER10a ExonRegion 0 576.90 250.76 409.84 173.86 328.74 232.46 147.71 325.58 157.62 596.84 507.24 171.02 119.82 377.14 577.75 463.04 421.03 440.24 409.15 292.35 358.05 453.07 263.93 77 E10_Da NovelBoundary 0 41.79 15.66 40.42 34.03 28.18 15.22 20.27 41.36 11.43 55.12 15.42 6.15 13.80 9.24 9.64 17.00 30.86 21.72 20.52 59.70 0.00 38.76 19.72 78 E10a_E11a KnownJunction 0 162.47 113.86 322.99 133.98 177.93 101.53 92.65 210.55 125.69 472.93 273.49 105.63 82.95 298.43 383.71 185.68 202.62 197.53 119.16 248.64 219.37 248.98 60.10 79 I10 Intron 0 40.62 31.01 26.40 31.50 38.69 17.84 15.66 19.64 5.81 30.55 13.73 2.81 7.33 17.61 23.60 10.94 7.81 12.79 19.26 13.42 4.62 23.56 11.58 80 I10_AR1 ActiveIntronRegion 0 41.04 31.33 26.68 31.81 39.09 18.02 15.83 19.84 5.87 30.85 13.87 2.84 7.40 17.76 23.84 11.05 7.89 12.92 19.46 13.55 4.67 23.81 11.69 81 E11_Aa NovelBoundary 0 78.53 25.65 52.93 43.72 11.46 12.10 11.13 24.48 24.10 56.79 22.16 6.30 6.82 30.61 15.08 14.87 24.12 30.76 21.18 23.39 11.31 36.25 22.71 82 ER11a ExonRegion 0 84.39 54.57 139.82 59.08 79.65 53.13 32.62 90.20 55.79 206.38 141.47 71.76 45.08 131.92 214.69 118.56 96.80 91.48 96.93 120.81 89.18 152.14 60.33