Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DAAM2 Gene 0 22.48 3.45 25.58 13.25 8.85 14.05 6.63 14.25 32.37 17.27 0.00 0.43 3.25 34.49 54.43 13.88 104.32 3.35 0.32 1.73 25.38 41.29 93.08 2 274867 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.60 0.00 0.34 0.00 0.00 0.00 0.00 0.15 0.00 0.00 6.00 0.00 0.00 0.00 1.00 0.57 5.34 3 405961 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 398904 Transcript 0 0.86 0.00 0.02 0.41 0.00 0.00 0.00 0.00 1.07 0.35 0.00 0.00 0.00 0.56 0.41 0.00 2.82 0.00 0.00 0.00 0.00 0.84 2.99 5 475489 Transcript 0 3.57 0.71 3.75 1.71 0.93 4.77 0.92 3.73 3.24 1.15 0.00 0.00 0.00 0.20 3.34 1.03 4.15 0.00 0.00 0.00 1.53 0.00 2.54 6 494405 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 491083 Transcript 0 1.56 0.56 0.90 2.57 1.48 0.35 3.65 2.71 5.31 2.80 0.00 0.00 0.66 5.86 8.03 3.89 24.25 1.40 0.00 0.59 5.00 9.71 29.21 8 496787 Transcript 0 8.49 0.02 4.56 0.91 0.13 0.18 1.71 0.44 2.38 1.23 0.00 0.00 1.72 3.76 4.17 1.27 23.95 0.02 0.00 0.00 1.64 0.48 0.97 9 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.60 0.00 0.34 0.00 0.00 0.00 0.00 0.15 0.00 0.00 6.00 0.00 0.00 0.00 1.00 0.57 5.34 10 ER1b ExonRegion 0 3.61 0.00 2.15 1.16 3.07 6.20 3.90 0.00 2.12 1.13 0.00 0.00 0.00 5.27 7.76 2.40 20.29 1.06 0.00 0.00 5.94 12.43 37.65 11 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.07 1.18 0.00 0.00 0.00 0.00 6.30 4.36 12.34 0.00 0.00 0.00 2.90 3.12 8.02 12 ER2a ExonRegion 0 1.71 0.00 0.05 0.82 0.00 0.00 0.00 0.00 0.49 0.69 0.00 0.00 0.00 1.12 0.83 0.00 1.34 0.00 0.00 0.00 0.00 1.69 5.99 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.30 0.00 0.00 0.00 0.00 0.00 0.00 14 ER3a ExonRegion 0 5.61 0.93 14.76 4.58 2.74 6.10 2.81 5.12 24.52 10.06 0.00 0.81 3.12 28.57 28.24 5.92 59.89 2.29 0.00 0.87 19.78 25.54 59.79 15 E3a_E4a KnownJunction 0 12.89 0.00 14.49 7.82 11.21 18.57 8.39 12.20 38.83 14.94 0.00 0.00 6.82 36.44 19.66 15.21 114.73 0.00 0.00 2.62 33.30 33.56 76.74 16 ER4a ExonRegion 0 12.93 0.00 16.92 8.33 8.71 21.09 5.53 9.78 32.98 16.86 0.00 0.00 0.99 47.68 24.92 9.74 108.89 0.76 0.00 2.65 43.12 38.98 91.23 17 E4_Da KnownBoundary 0 0.00 0.00 3.19 1.30 4.07 4.54 0.00 0.00 1.39 1.26 0.00 0.00 0.00 2.47 4.45 0.00 4.58 0.00 0.00 0.00 2.97 0.00 3.16 18 E4a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E4a_E5a KnownJunction 0 20.82 0.00 31.49 4.96 16.13 23.05 6.40 18.89 33.97 18.02 0.00 0.00 0.00 69.16 40.42 8.12 143.62 2.57 0.00 0.00 52.45 52.60 107.22 20 ER4b ExonRegion 0 1.12 0.00 1.71 0.10 0.86 0.31 0.00 1.21 2.63 0.17 0.00 1.72 0.00 1.06 2.52 1.43 11.05 0.00 0.00 0.00 0.35 0.88 2.69 21 E4_Ab KnownBoundary 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 1.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.35 0.00 0.00 0.00 0.00 2.33 8.45 22 ER4c ExonRegion 0 0.36 0.00 1.19 0.23 8.56 1.05 0.00 0.79 1.69 0.00 0.00 0.00 0.00 1.21 1.74 0.00 10.09 0.00 0.00 0.00 0.00 2.32 6.38 23 E4_Db KnownBoundary 0 0.00 0.00 0.00 0.00 17.32 2.90 0.00 1.81 1.65 0.00 0.00 0.00 0.00 2.47 6.30 0.00 4.58 0.00 0.00 0.00 0.00 3.00 3.50 24 ER4d ExonRegion 0 5.73 0.00 2.23 2.74 2.25 0.61 0.40 5.11 3.04 1.05 0.00 0.00 0.00 0.38 5.21 2.67 7.88 0.83 0.00 0.64 0.66 0.22 1.97 25 E4_Dc KnownBoundary 0 2.96 0.00 4.61 5.26 0.00 5.00 0.00 7.15 1.07 0.00 0.00 0.00 0.00 2.47 4.45 0.00 4.68 0.00 0.00 0.00 0.00 0.00 7.51 26 E4c_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER4e ExonRegion 0 3.57 0.71 3.75 1.71 0.93 4.77 0.92 3.73 3.24 1.15 0.00 0.00 0.00 0.20 3.34 1.03 4.15 0.00 0.00 0.00 1.53 0.00 2.54 28 ER5a ExonRegion 0 12.16 4.15 22.71 5.83 4.32 13.20 5.58 15.92 41.42 18.79 0.00 0.00 2.63 67.84 74.47 8.96 145.11 1.70 0.00 3.60 42.28 64.89 117.70 29 E5a_E6a KnownJunction 1 0.00 0.00 17.47 12.49 6.45 17.04 0.00 18.11 35.27 16.39 0.00 0.00 0.00 59.10 47.22 7.95 183.36 5.93 0.00 5.56 44.54 34.60 67.52 30 ER6a ExonRegion 0 6.24 0.90 12.56 8.58 2.73 16.10 2.80 13.83 35.47 18.68 0.00 0.00 2.52 53.75 50.51 9.57 130.37 5.93 0.00 4.79 40.97 52.04 99.23 31 E6a_E7a KnownJunction 0 10.15 2.50 20.70 8.62 3.40 33.79 6.23 11.83 44.01 25.17 0.00 0.00 6.01 56.57 60.94 23.93 145.77 4.39 0.00 5.56 37.62 66.68 119.59 32 ER7a ExonRegion 0 8.29 1.53 19.81 7.61 4.68 27.66 6.18 15.99 44.67 24.85 0.00 0.00 7.43 51.84 62.86 22.04 140.01 3.70 0.00 5.50 39.48 70.49 116.98 33 ER7b ExonRegion 0 7.46 2.45 17.60 9.69 7.76 15.59 7.08 11.10 38.11 23.25 0.00 0.56 5.32 49.00 58.14 11.35 134.63 3.89 0.00 2.83 32.22 53.22 107.87 34 E7b_E8a KnownJunction 0 10.45 5.26 20.28 7.72 0.00 9.65 10.16 14.42 53.53 27.78 0.00 0.00 6.98 61.10 67.87 15.21 125.29 9.99 0.00 2.94 25.21 50.82 131.97 35 ER8a ExonRegion 1 8.81 3.54 17.97 9.76 8.00 15.33 8.22 18.78 46.49 19.23 0.00 0.31 3.51 51.94 64.17 8.22 164.57 7.22 0.00 0.29 29.76 59.18 127.12 36 E8a_E9a KnownJunction 1 16.23 3.22 31.22 11.52 7.05 29.47 18.81 15.94 55.67 22.59 0.00 5.85 8.28 59.57 71.45 4.19 160.26 1.87 0.00 0.00 37.25 51.25 149.04 37 ER9a ExonRegion 0 17.71 1.76 33.43 12.11 6.64 13.22 10.63 15.06 53.23 24.66 0.00 1.42 7.08 57.58 67.06 23.46 175.14 5.17 0.00 2.09 35.32 71.92 129.10 38 E9a_E10a KnownJunction 0 10.15 2.57 45.33 18.28 11.29 2.21 21.55 17.33 64.58 31.19 0.00 0.00 0.00 47.97 59.21 30.85 223.84 15.96 0.00 0.00 65.79 86.09 165.35 39 ER10a ExonRegion 0 10.87 4.95 43.82 24.29 10.22 11.39 14.37 16.72 55.01 29.03 0.00 0.00 6.09 47.10 62.75 26.88 186.92 10.56 0.00 1.87 60.19 68.76 175.41 40 E10a_E11a KnownJunction 0 12.15 9.60 32.52 26.37 18.85 18.34 9.76 17.70 48.67 27.32 0.00 0.00 15.10 44.91 51.92 39.48 162.32 1.87 0.00 6.52 48.87 52.42 137.35 41 ER11a ExonRegion 0 18.89 9.18 34.30 18.88 18.58 18.35 5.90 15.45 53.42 29.10 0.00 2.11 10.37 49.68 62.50 21.65 174.80 4.42 1.49 3.03 43.75 57.77 116.66 42 E11a_E12a KnownJunction 0 19.78 0.00 33.14 16.02 30.90 7.27 6.58 11.30 47.45 21.33 0.00 5.40 6.82 51.74 40.55 8.12 153.16 13.02 0.00 5.43 54.73 62.52 98.34 43 ER11b ExonRegion 0 18.11 1.36 36.62 16.20 21.41 17.32 6.03 12.10 47.07 17.84 0.00 4.33 7.30 44.03 45.13 10.90 169.45 3.28 0.00 4.26 48.24 63.89 118.12 44 ER12a ExonRegion 0 8.05 4.27 29.64 11.12 12.30 9.71 7.17 12.34 42.45 21.87 0.00 1.15 6.21 38.79 57.96 25.04 151.01 3.60 0.00 3.92 48.26 54.62 110.79 45 E12a_E13a KnownJunction 1 3.78 2.57 39.89 15.12 12.99 2.10 12.50 12.65 45.11 20.42 0.00 6.30 6.17 45.79 58.47 4.36 193.36 8.33 0.00 3.26 53.50 65.21 79.56 46 ER13a ExonRegion 0 5.31 0.72 27.23 8.43 11.11 14.30 10.37 20.24 38.02 16.43 0.00 1.54 6.36 63.89 52.32 13.25 159.11 4.54 0.00 2.63 38.66 67.38 157.78 47 E13a_E14a KnownJunction 0 5.78 2.89 21.05 6.23 16.13 24.47 7.60 21.07 35.73 20.50 0.00 0.00 12.82 97.77 80.47 20.93 103.13 2.49 0.00 0.00 47.51 91.18 205.55 48 ER14a ExonRegion 0 11.98 1.88 21.29 8.67 8.79 11.33 3.71 14.49 39.12 25.60 0.00 0.00 9.38 61.55 64.55 18.78 171.83 5.39 0.00 0.00 43.66 61.76 159.10 49 E14_Da KnownBoundary 0 3.56 0.00 1.39 2.06 0.00 5.51 0.00 1.85 2.95 3.33 0.00 0.00 6.66 9.30 6.18 7.52 20.94 1.82 3.48 0.00 5.44 13.66 45.50 50 E14a_E15a KnownJunction 0 16.97 3.35 16.26 5.76 0.00 0.00 2.03 15.16 41.12 20.28 0.00 0.00 0.00 70.05 109.52 12.05 155.77 6.63 0.00 0.00 30.33 59.27 163.98 51 ER14b ExonRegion 0 1.56 0.56 0.90 2.57 1.48 0.35 3.65 2.71 5.31 2.80 0.00 0.00 0.66 5.86 8.03 3.89 24.25 1.40 0.00 0.59 5.00 9.71 29.21 52 E14_Db NovelBoundary 0 10.82 0.00 4.05 5.79 0.00 2.21 0.00 0.00 4.08 7.04 0.00 0.00 0.00 4.94 9.02 0.00 20.10 0.00 0.00 3.26 9.02 8.70 41.15 53 I14 Intron 0 0.52 0.00 3.16 2.01 0.66 0.00 2.95 3.19 3.65 2.12 0.00 0.00 0.96 7.14 9.04 1.47 13.89 0.68 0.00 0.53 12.55 10.32 29.81 54 I14_SR1 SilentIntronRegion 0 0.53 0.00 3.18 2.02 0.67 0.00 2.96 3.20 3.66 2.13 0.00 0.00 0.96 7.18 9.09 1.48 13.96 0.69 0.00 0.53 12.61 10.37 29.95 55 E15_Aa NovelBoundary 0 14.22 0.00 7.16 3.00 0.00 2.90 2.25 4.76 6.74 2.55 0.00 0.00 0.00 13.19 33.01 8.03 16.08 0.00 0.00 0.00 25.88 14.39 45.16 56 ER15a ExonRegion 0 8.72 1.86 8.46 4.18 3.84 7.82 4.57 3.16 19.75 12.56 0.00 0.00 2.63 29.94 37.75 9.99 74.01 2.00 0.00 1.43 18.46 29.04 78.26 57 E15_Da NovelBoundary 0 0.00 0.00 0.00 0.00 4.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 13.37 0.00 0.00 0.00 9.14 5.33 7.09 58 E15a_E16a KnownJunction 0 6.74 0.00 9.73 13.85 8.06 16.07 2.08 4.19 13.89 12.17 0.00 0.00 0.00 43.03 50.31 0.00 63.67 1.87 0.00 0.00 23.35 26.58 70.68 59 I15_SR1 SilentIntronRegion 0 3.84 0.85 0.82 1.08 0.00 1.16 0.20 1.10 2.70 1.34 0.00 0.00 0.16 1.86 5.29 0.62 11.46 0.00 0.00 0.00 2.50 3.80 21.27 60 ER16a ExonRegion 0 8.74 1.32 12.59 11.67 6.86 14.31 2.21 8.64 29.76 11.60 0.00 0.00 4.30 41.08 54.86 14.45 106.36 1.11 0.00 2.05 17.59 38.72 102.48 61 E16a_E17b KnownJunction 0 3.11 3.16 14.96 3.53 16.89 18.51 4.15 2.18 20.20 8.06 0.00 0.00 6.82 19.78 34.24 15.72 76.39 2.40 0.00 0.00 20.08 43.48 88.18 62 I16 Intron 0 7.31 0.43 2.31 3.20 1.91 1.46 1.78 2.38 2.72 2.24 0.00 0.14 0.73 4.34 6.53 1.93 23.61 1.12 0.41 0.93 0.46 1.89 4.76 63 I16_AR1 ActiveIntronRegion 0 7.32 0.43 2.31 3.20 1.91 1.46 1.78 2.38 2.72 2.25 0.00 0.14 0.73 4.34 6.53 1.93 23.62 1.12 0.41 0.93 0.46 1.89 4.77 64 ER17a ExonRegion 0 8.49 0.02 4.56 0.91 0.13 0.18 1.71 0.44 2.38 1.23 0.00 0.00 1.72 3.76 4.17 1.27 23.95 0.02 0.00 0.00 1.64 0.48 0.97 65 E17_Ab KnownBoundary 0 23.71 0.00 1.24 3.70 0.00 0.00 0.00 1.64 1.36 3.87 0.00 0.00 6.82 4.59 13.35 4.36 22.81 0.00 0.00 0.00 0.00 0.00 0.00 66 ER17b ExonRegion 0 11.52 2.94 12.66 12.41 7.98 10.35 4.31 11.10 27.86 17.16 0.00 0.00 3.58 38.11 45.43 13.65 116.40 1.27 0.00 0.00 14.93 41.85 83.81 67 E17a_E18a KnownJunction 0 11.34 3.35 13.84 15.68 3.82 8.01 6.76 7.72 29.05 16.57 0.00 0.00 0.00 51.56 96.55 20.17 158.20 2.11 0.00 0.00 25.58 42.07 132.06 68 E18_Aa NovelBoundary 0 27.26 3.09 0.00 6.59 0.00 0.00 2.12 3.82 1.39 3.71 0.00 0.00 0.00 4.65 22.13 0.00 17.58 2.11 0.00 6.39 0.00 5.51 0.00 69 ER18a ExonRegion 0 11.43 2.73 20.18 11.62 14.64 20.56 6.07 12.40 31.55 14.52 0.00 0.00 2.32 50.35 69.12 17.10 116.23 0.54 0.00 1.28 20.84 39.51 112.08 70 E18a_E19a KnownJunction 0 3.33 3.35 14.34 12.25 12.22 21.64 2.03 9.04 31.54 11.85 0.00 0.00 0.00 36.55 57.61 11.88 103.04 0.00 0.00 0.00 28.54 39.56 107.73 71 E19_Aa NovelBoundary 0 31.49 2.89 1.71 5.09 3.74 0.00 1.99 2.46 0.00 0.00 0.00 0.00 6.33 4.94 0.00 0.00 21.97 0.00 0.00 3.07 9.02 0.00 12.12 72 ER19a ExonRegion 0 4.43 4.07 19.26 11.55 14.27 26.55 1.39 13.42 28.58 20.10 0.00 0.00 0.00 31.09 46.56 19.81 85.35 0.00 0.00 2.03 24.35 39.09 103.20 73 ER19b ExonRegion 0 14.84 0.66 24.07 10.95 10.21 19.81 4.34 13.20 35.62 22.03 0.00 0.00 2.29 40.09 49.62 19.91 111.85 0.00 0.00 1.63 23.37 41.89 106.44 74 E19b_E20a KnownJunction 0 20.52 0.00 30.90 12.79 0.00 17.49 6.23 19.92 35.50 23.29 0.00 0.00 0.00 47.68 79.24 16.24 142.03 0.00 0.00 3.00 31.82 47.15 123.52 75 ER20a ExonRegion 0 12.46 3.54 23.14 8.77 1.59 11.93 7.33 11.96 23.62 20.91 0.00 0.00 0.00 33.54 49.94 12.79 92.98 1.37 0.00 1.51 29.86 28.47 72.66 76 E20a_E21a KnownJunction 0 6.52 6.51 13.42 3.83 3.23 2.61 2.16 12.94 33.88 18.62 0.00 0.00 0.00 45.91 43.88 11.62 114.63 1.91 0.00 0.00 38.73 34.90 71.62 77 E21_Aa NovelBoundary 0 0.00 0.00 7.18 4.89 3.48 2.10 2.16 0.00 3.07 1.56 0.00 0.00 0.00 2.24 22.99 8.12 9.26 0.00 4.42 0.00 10.56 4.96 12.04 78 ER21a ExonRegion 0 7.05 2.68 23.58 13.98 14.66 17.27 5.41 15.19 32.11 18.70 0.00 1.08 2.33 38.83 64.31 15.90 117.95 2.78 0.00 1.98 36.99 37.42 118.16 79 E21a_E22a KnownJunction 0 7.19 3.35 17.65 12.12 16.47 39.86 8.57 30.19 38.37 22.75 0.00 0.00 0.00 23.60 65.02 19.31 139.69 2.57 0.00 0.00 29.41 48.25 122.67 80 ER22a ExonRegion 0 13.54 3.45 24.64 14.01 8.62 25.89 7.58 21.83 32.57 16.57 0.00 1.68 3.65 37.79 72.64 19.57 131.15 2.94 0.00 0.39 35.83 39.24 132.75 81 E22_Da NovelBoundary 0 13.41 0.00 4.52 5.13 8.15 0.00 12.54 2.22 8.42 4.19 0.00 0.00 0.00 0.00 13.60 0.00 12.16 0.00 0.00 0.00 2.72 8.08 0.00 82 E22a_E23a KnownJunction 0 18.45 0.00 14.52 11.15 4.33 15.96 10.02 18.65 34.43 8.06 0.00 0.00 0.00 17.36 53.53 27.86 117.62 5.10 0.00 3.26 19.21 29.09 113.70 83 ER23a ExonRegion 0 11.83 0.90 15.99 5.92 9.47 12.57 8.36 16.55 33.06 14.40 0.00 0.00 6.00 32.54 73.96 18.32 104.33 3.97 0.00 1.08 34.39 40.03 113.66 84 E23a_E24a KnownJunction 0 14.82 8.35 18.45 4.73 12.22 20.22 3.89 27.36 31.11 16.76 0.00 0.00 12.99 29.73 101.49 7.78 131.56 2.57 0.00 0.00 41.39 68.03 107.30 85 E24_Aa NovelBoundary 0 22.82 0.00 3.67 9.72 3.99 10.16 1.90 4.56 3.47 8.19 0.00 0.00 0.00 0.00 14.59 0.00 8.32 0.00 0.00 0.00 0.00 8.70 19.55 86 ER24a ExonRegion 0 15.92 1.46 16.95 8.09 7.91 15.70 4.09 15.77 33.26 17.54 0.00 0.62 3.20 32.59 57.63 14.28 115.11 2.97 1.18 0.00 37.16 42.02 113.84 87 E24_Da NovelBoundary 0 16.15 0.00 8.99 12.12 0.00 0.00 1.81 2.55 3.33 2.28 0.00 0.00 0.00 0.00 4.45 0.00 8.42 0.00 0.00 0.00 0.00 0.00 16.48 88 E24a_E25a KnownJunction 0 7.11 3.35 22.91 5.33 3.57 13.00 8.74 18.40 42.10 14.51 0.00 5.40 0.00 36.38 120.16 11.45 95.56 2.40 0.00 0.00 45.41 28.90 129.92 89 ER25a ExonRegion 0 17.96 2.93 12.68 7.29 3.46 15.29 6.93 3.97 28.47 11.42 0.00 0.43 0.00 32.74 71.53 9.32 90.61 3.31 0.04 1.27 27.81 32.39 93.17 90 E25a_E26a KnownJunction 0 6.82 2.76 15.52 4.99 0.00 5.79 6.18 3.70 19.99 6.39 0.00 0.00 0.00 41.50 78.50 4.36 45.16 0.00 0.00 0.00 17.73 19.04 56.51 91 ER26a ExonRegion 0 40.11 5.39 38.93 20.43 12.10 17.93 9.04 20.46 39.51 21.17 0.00 0.41 3.37 36.25 69.16 17.28 115.47 4.32 0.64 2.17 25.99 49.14 104.28